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(-) Description

Title :  CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE MAM33
 
Authors :  Y. L. Jiang, Y. G. Pu, X. X. Ma, Y. Chen, C. Z. Zhou
Date :  24 Feb 11  (Deposition) - 08 Jun 11  (Release) - 17 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  A Bowl Like Structure, Mitochondrial Oxidative Phosphorylation, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. G. Pu, Y. L. Jiang, X. D. Ye, X. X. Ma, P. C. Guo, F. M. Lian, Y. B. Teng, Y. Chen, C. Z. Zhou
Crystal Structures And Putative Interface Of Saccharomyces Cerevisiae Mitochondrial Matrix Proteins Mmf1 And Mam33.
J. Struct. Biol. V. 175 469 2011
PubMed-ID: 21600990  |  Reference-DOI: 10.1016/J.JSB.2011.05.005

(-) Compounds

Molecule 1 - MITOCHONDRIAL ACIDIC PROTEIN MAM33
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: P28
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MAM33, YIL070C
    Organism Common: BREWER'S YEAST,LAGER BEER YEAST,YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:179
 aligned with MAM33_YEAST | P40513 from UniProtKB/Swiss-Prot  Length:266

    Alignment length:218
                                    58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258        
          MAM33_YEAST    49 ETQRVGDILQSELKIEKETLPESTSLDSFNDFLNKYKFSLVETPGKNEAEIVRRTESGETVHVFFDVAQIANLPYNNAMDENTEQNEDGINEDDFDALSDNFANVNVVISKESASEPAVSFELLMNLQEGSFYVDSATPYPSVDAALNQSAEAEITRELVYHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKFFH 266
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------MAM33-3qv0      A01 A:57-265                                                                                                                                                                                     - Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh------hhhhhhhhhhhh..eee......eeeeeee.....eeeeeeehhhhh------------------------------.eeeeeeee.---...eeeeeeeee....eeeeeeeeee.hhhhhhh.hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qv0 A  49 ETQRVGDILQSELKIEKE------SLDSFNDFLNKYKFSLVETPGKNEAEIVRRTESGETVHVFFDVAQIA------------------------------FANVNVVISK---SEPAVSFELLMNLQEGSFYVDSATPYPSVDAALNQSAEAEITRELVYHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKFFH 266
                                    58       | -    |   78        88        98       108       118|        -         -         - |     158|   |  168       178       188       198       208       218       228       238       248       258        
                                            66     73                                           119                            150      159 163
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: MAM33] (4)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A   (MAM33_YEAST | P40513)
molecular function
    GO:0008494    translation activator activity    Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.
biological process
    GO:0009060    aerobic respiration    The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
    GO:0070131    positive regulation of mitochondrial translation    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.
cellular component
    GO:0005759    mitochondrial matrix    The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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