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(-) Description

Title :  STRUCTURE OF ASPERGILLUS ORYZAE CUTINASE EXPRESSED IN PICHIA PASTORIS, CRYSTALLIZED IN THE PRESENCE OF PARAOXON
 
Authors :  A. Lu, Y. Gosser, J. K. Montclare, Z. Liu, X. Kong
Date :  11 Feb 11  (Deposition) - 29 Feb 12  (Release) - 14 Mar 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.57
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha-Beta Hydrolase Fold, Esterase, Hydrolase, Cutin, Mono-Ethyl Phosphorylated Serine Residue, Secreted, Phosphorylated Serine Residue (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Lu, Y. Gosser, J. K. Montclare, Z. Liu, X. Kong
Structure Of Aspergillus Oryzae Cutinase Expressed In Pichi Pastoris, Crystallized In The Presence Of Paraoxon
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CUTINASE 1
    Chains: A
    EC Number: 3.1.1.74
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Taxid: 4922
    Fragment: UNP RESIDUES 26-212
    Gene: CUTL, AO090005000029
    Organism Scientific: ASPERGILLUS ORYZAE
    Organism Taxid: 5062
    Synonym: CUTIN HYDROLASE 1, L1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SEP1Mod. Amino AcidPHOSPHOSERINE

(-) Sites  (0, 0)

(no "Site" information available for 3QPD)

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:37 -A:115
2A:63 -A:76
3A:177 -A:184

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:35 -Pro A:36
2Gly A:80 -Pro A:81

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3QPD)

(-) PROSITE Motifs  (2, 2)

Asymmetric/Biological Unit (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CUTINASE_1PS00155 Cutinase, serine active site.CUTI1_ASPOR116-128  1A:116-128
2CUTINASE_2PS00931 Cutinase, aspartate and histidine active sites.CUTI1_ASPOR177-194  1A:177-194

(-) Exons   (0, 0)

(no "Exon" information available for 3QPD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:187
 aligned with CUTI1_ASPOR | P52956 from UniProtKB/Swiss-Prot  Length:213

    Alignment length:187
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       
          CUTI1_ASPOR    26 LTGGDELRDGPCKPITFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTRNAQERGQIANFPKDKVKVYCAVGDLVCLGTLIVAPPHFSYLSDTGDASDFLLSQL 212
               SCOP domains d3qpda_ A: automated matches                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh....eeeeee...........hhhhhhhhhhhhhh...eeeee.......hhhhhhh....hhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhh..hhhhhhheeeeeee...............hhh.eeee....hhhhhh....hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------CUTINASE_1   ------------------------------------------------CUTINASE_2        ------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qpd A  26 LTGGDELRDGPCKPITFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYsQGTAVMNGAIKRLSADVQDKIKGVVLFGYTRNAQERGQIANFPKDKVKVYCAVGDLVCLGTLIVAPPHFSYLSDTGDASDFLLSQL 212
                                    35        45        55        65        75        85        95       105       115       125|      135       145       155       165       175       185       195       205       
                                                                                                                              126-SEP
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3QPD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3QPD)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (CUTI1_ASPOR | P52956)
molecular function
    GO:0052689    carboxylic ester hydrolase activity    Catalysis of the hydrolysis of a carboxylic ester bond.
    GO:0050525    cutinase activity    Catalysis of the reaction: cutin + H2O = cutin monomers.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0016042    lipid catabolic process    The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  Cis Peptide Bonds
    Gly A:35 - Pro A:36   [ RasMol ]  
    Gly A:80 - Pro A:81   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CUTI1_ASPOR | P52956: 3gbs

(-) Related Entries Specified in the PDB File

3gbs CRYSTAL STRUCTURE OF ASPERGILLUS ORYZAE CUTINASE
3qpa
3qpc HIGH RESOLUTION STRUCTURE OF FSC CUTIANSE IN THE PRESENCE OF PAROXON