Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
(-)Biological Unit 5
(-)Biological Unit 6
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)
Image Biological Unit 5
Biological Unit 5  (Jmol Viewer)
Image Biological Unit 6
Biological Unit 6  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF H159A APAH COMPLEXED WITH ACETYLSPERMINE
 
Authors :  P. M. Lombardi, D. W. Christianson
Date :  07 Jan 11  (Deposition) - 02 Mar 11  (Release) - 30 Mar 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,I  (1x)
Biol. Unit 2:  B,F  (1x)
Biol. Unit 3:  C,K  (1x)
Biol. Unit 4:  D,J  (1x)
Biol. Unit 5:  E,H  (1x)
Biol. Unit 6:  G,L  (1x)
Keywords :  Hdac, Polyamine, Arginase Fold, Deacetylase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. M. Lombardi, H. D. Angell, D. A. Whittington, E. F. Flynn, K. R. Rajashankar, D. W. Christianson
Structure Of Prokaryotic Polyamine Deacetylase Reveals Evolutionary Functional Relationships With Eukaryotic Histone Deacetylases .
Biochemistry V. 50 1808 2011
PubMed-ID: 21268586  |  Reference-DOI: 10.1021/BI101859K

(-) Compounds

Molecule 1 - ACETYLPOLYAMINE AMIDOHYDROLASE
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: APHA, APH
    Mutation: YES
    Organism Common: MYCOPLANA BULLATA
    Organism Scientific: MYCOPLANA RAMOSA
    Organism Taxid: 40837

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): A       I   
Biological Unit 2 (1x):  B   F      
Biological Unit 3 (1x):   C       K 
Biological Unit 4 (1x):    D     J  
Biological Unit 5 (1x):     E  H    
Biological Unit 6 (1x):       G    L

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 48)

Asymmetric Unit (4, 48)
No.NameCountTypeFull Name
1K12Ligand/IonPOTASSIUM ION
2NA12Ligand/IonSODIUM ION
3SP512Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN12Ligand/IonZINC ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION
Biological Unit 5 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION
Biological Unit 6 (1, 2)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
2NA-1Ligand/IonSODIUM ION
3SP52Ligand/IonN-[3-({4-[(3-AMINOPROPYL)AMINO]BUTYL}AMINO)PROPYL]ACETAMIDE
4ZN-1Ligand/IonZINC ION

(-) Sites  (48, 48)

Asymmetric Unit (48, 48)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:117 , PRO A:156 , HIS A:158 , GLY A:167 , TYR A:168 , HIS A:197 , PHE A:225 , TYR A:323 , ZN A:344 , TYR I:83 , GLU I:106BINDING SITE FOR RESIDUE SP5 A 401
02AC2SOFTWAREASP A:193 , ASP A:195 , HIS A:197 , SER A:216 , LEU A:217BINDING SITE FOR RESIDUE K A 342
03AC3SOFTWAREPHE A:206 , ARG A:209 , VAL A:212 , THR A:243 , HOH A:345BINDING SITE FOR RESIDUE NA A 343
04AC4SOFTWAREASP A:195 , HIS A:197 , ASP A:284 , SP5 A:401BINDING SITE FOR RESIDUE ZN A 344
05AC5SOFTWARETYR B:19 , GLU B:117 , HIS B:158 , GLY B:167 , TYR B:168 , HIS B:197 , TYR B:323 , ZN B:344 , HOH B:499 , TYR F:83 , GLU F:106BINDING SITE FOR RESIDUE SP5 B 402
06AC6SOFTWAREASP B:193 , ASP B:195 , HIS B:197 , SER B:216 , LEU B:217BINDING SITE FOR RESIDUE K B 342
07AC7SOFTWAREPHE B:206 , ARG B:209 , VAL B:212 , THR B:243 , HOH B:345BINDING SITE FOR RESIDUE NA B 343
08AC8SOFTWAREASP B:195 , HIS B:197 , ASP B:284 , SP5 B:402BINDING SITE FOR RESIDUE ZN B 344
09AC9SOFTWAREGLU C:117 , HIS C:158 , GLY C:167 , TYR C:168 , ASP C:284 , TYR C:323 , ZN C:344 , TYR K:83 , GLU K:106BINDING SITE FOR RESIDUE SP5 C 403
10BC1SOFTWAREASP C:193 , ASP C:195 , HIS C:197 , SER C:216 , LEU C:217BINDING SITE FOR RESIDUE K C 342
11BC2SOFTWAREPHE C:206 , ARG C:209 , VAL C:212 , THR C:243 , HOH C:345BINDING SITE FOR RESIDUE NA C 343
12BC3SOFTWAREASP C:195 , HIS C:197 , ASP C:284 , TYR C:323 , SP5 C:403BINDING SITE FOR RESIDUE ZN C 344
13BC4SOFTWARETYR D:19 , GLU D:117 , PRO D:156 , HIS D:158 , GLY D:167 , TYR D:168 , HIS D:197 , PHE D:225 , ILE D:291 , TYR D:323 , ZN D:344 , HOH D:769 , TYR J:83 , GLU J:106BINDING SITE FOR RESIDUE SP5 D 404
14BC5SOFTWAREASP D:193 , ASP D:195 , HIS D:197 , SER D:216 , LEU D:217BINDING SITE FOR RESIDUE K D 342
15BC6SOFTWAREPHE D:206 , ARG D:209 , VAL D:212 , THR D:243 , HOH D:345BINDING SITE FOR RESIDUE NA D 343
16BC7SOFTWAREASP D:195 , HIS D:197 , ASP D:284 , TYR D:323 , SP5 D:404BINDING SITE FOR RESIDUE ZN D 344
17BC8SOFTWAREGLU E:117 , PRO E:156 , HIS E:158 , GLY E:167 , TYR E:168 , CYS E:169 , TYR E:323 , ZN E:344 , TYR H:83 , GLU H:106BINDING SITE FOR RESIDUE SP5 E 405
18BC9SOFTWAREASP E:193 , ASP E:195 , HIS E:197 , SER E:216 , LEU E:217BINDING SITE FOR RESIDUE K E 342
19CC1SOFTWAREPHE E:206 , ARG E:209 , VAL E:212 , THR E:243 , HOH E:345BINDING SITE FOR RESIDUE NA E 343
20CC2SOFTWAREASP E:195 , HIS E:197 , ASP E:284 , SP5 E:405BINDING SITE FOR RESIDUE ZN E 344
21CC3SOFTWARETYR B:83 , GLU B:106 , TYR F:19 , GLU F:117 , PRO F:156 , HIS F:158 , GLY F:167 , TYR F:168 , CYS F:169 , ASP F:195 , HIS F:197 , PHE F:225 , TYR F:323 , ZN F:344BINDING SITE FOR RESIDUE SP5 F 406
22CC4SOFTWAREASP F:193 , ASP F:195 , HIS F:197 , SER F:216 , LEU F:217 , HIS F:218BINDING SITE FOR RESIDUE K F 342
23CC5SOFTWAREPHE F:206 , ARG F:209 , VAL F:212 , THR F:243 , HOH F:904BINDING SITE FOR RESIDUE NA F 343
24CC6SOFTWAREASP F:195 , HIS F:197 , ASP F:284 , TYR F:323 , SP5 F:406BINDING SITE FOR RESIDUE ZN F 344
25CC7SOFTWAREGLU G:117 , HIS G:158 , GLY G:167 , TYR G:168 , HIS G:197 , TYR G:323 , ZN G:344 , HOH G:897 , GLU L:106BINDING SITE FOR RESIDUE SP5 G 407
26CC8SOFTWAREASP G:193 , ASP G:195 , HIS G:197 , SER G:216 , LEU G:217 , HIS G:218BINDING SITE FOR RESIDUE K G 342
27CC9SOFTWAREPHE G:206 , ARG G:209 , VAL G:212 , THR G:243 , HOH G:345BINDING SITE FOR RESIDUE NA G 343
28DC1SOFTWAREASP G:195 , HIS G:197 , ASP G:284 , SP5 G:407BINDING SITE FOR RESIDUE ZN G 344
29DC2SOFTWAREGLU E:106 , TYR H:19 , GLU H:117 , PRO H:156 , HIS H:158 , GLY H:167 , TYR H:168 , CYS H:169 , HIS H:197 , PRO H:290 , TYR H:323 , ZN H:344BINDING SITE FOR RESIDUE SP5 H 408
30DC3SOFTWAREASP H:193 , ASP H:195 , HIS H:197 , SER H:216 , LEU H:217BINDING SITE FOR RESIDUE K H 342
31DC4SOFTWAREPHE H:206 , ARG H:209 , VAL H:212 , THR H:243 , HOH H:906BINDING SITE FOR RESIDUE NA H 343
32DC5SOFTWAREASP H:195 , HIS H:197 , ASP H:284 , GLY H:321 , SP5 H:408BINDING SITE FOR RESIDUE ZN H 344
33DC6SOFTWAREGLU A:106 , TYR I:19 , GLU I:117 , PRO I:156 , HIS I:158 , GLY I:167 , TYR I:168 , CYS I:169 , PHE I:225 , PRO I:290 , TYR I:323 , ZN I:344BINDING SITE FOR RESIDUE SP5 I 409
34DC7SOFTWAREASP I:193 , ASP I:195 , HIS I:197 , SER I:216 , LEU I:217BINDING SITE FOR RESIDUE K I 342
35DC8SOFTWAREPHE I:206 , ARG I:209 , VAL I:212 , THR I:243 , HOH I:345BINDING SITE FOR RESIDUE NA I 343
36DC9SOFTWAREASP I:195 , HIS I:197 , ASP I:284 , GLY I:321 , SP5 I:409BINDING SITE FOR RESIDUE ZN I 344
37EC1SOFTWARETYR D:83 , GLU D:106 , TYR J:19 , GLU J:117 , HIS J:158 , GLY J:167 , TYR J:168 , CYS J:169 , TYR J:323 , ZN J:344BINDING SITE FOR RESIDUE SP5 J 410
38EC2SOFTWAREASP J:193 , ASP J:195 , HIS J:197 , SER J:216 , LEU J:217BINDING SITE FOR RESIDUE K J 342
39EC3SOFTWAREPHE J:206 , ARG J:209 , VAL J:212 , THR J:243 , HOH J:345BINDING SITE FOR RESIDUE NA J 343
40EC4SOFTWAREASP J:195 , HIS J:197 , ASP J:284 , SP5 J:410BINDING SITE FOR RESIDUE ZN J 344
41EC5SOFTWARETYR C:83 , TYR K:19 , GLU K:117 , PRO K:156 , HIS K:158 , GLY K:167 , TYR K:168 , CYS K:169 , TYR K:323 , ZN K:344 , HOH K:804BINDING SITE FOR RESIDUE SP5 K 411
42EC6SOFTWAREASP K:193 , ASP K:195 , HIS K:197 , SER K:216 , LEU K:217BINDING SITE FOR RESIDUE K K 342
43EC7SOFTWAREPHE K:206 , ARG K:209 , VAL K:212 , THR K:243 , HOH K:345BINDING SITE FOR RESIDUE NA K 343
44EC8SOFTWAREASP K:195 , HIS K:197 , ASP K:284 , GLY K:321 , SP5 K:411BINDING SITE FOR RESIDUE ZN K 344
45EC9SOFTWARETYR G:83 , GLU G:106 , TYR L:19 , GLU L:117 , PRO L:156 , HIS L:158 , GLY L:167 , TYR L:168 , CYS L:169 , HIS L:197 , ILE L:291 , TYR L:323 , ZN L:344BINDING SITE FOR RESIDUE SP5 L 412
46FC1SOFTWAREASP L:193 , ASP L:195 , HIS L:197 , SER L:216 , LEU L:217BINDING SITE FOR RESIDUE K L 342
47FC2SOFTWAREPHE L:206 , ARG L:209 , VAL L:212 , THR L:243BINDING SITE FOR RESIDUE NA L 343
48FC3SOFTWAREASP L:195 , HIS L:197 , ASP L:284 , SP5 L:412BINDING SITE FOR RESIDUE ZN L 344

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3Q9E)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Arg A:154 -Pro A:155
2Phe A:225 -Pro A:226
3Arg B:154 -Pro B:155
4Phe B:225 -Pro B:226
5Arg C:154 -Pro C:155
6Phe C:225 -Pro C:226
7Arg D:154 -Pro D:155
8Phe D:225 -Pro D:226
9Arg E:154 -Pro E:155
10Phe E:225 -Pro E:226
11Arg F:154 -Pro F:155
12Phe F:225 -Pro F:226
13Arg G:154 -Pro G:155
14Phe G:225 -Pro G:226
15Arg H:154 -Pro H:155
16Phe H:225 -Pro H:226
17Arg I:154 -Pro I:155
18Phe I:225 -Pro I:226
19Arg J:154 -Pro J:155
20Phe J:225 -Pro J:226
21Arg K:154 -Pro K:155
22Phe K:225 -Pro K:226
23Arg L:154 -Pro L:155
24Phe L:225 -Pro L:226

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3Q9E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3Q9E)

(-) Exons   (0, 0)

(no "Exon" information available for 3Q9E)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhh.....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh...eeeee.................hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e A   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain B from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhhh.....................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh..eeeeee.................hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e B   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain C from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh..eeeeee................hhhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e C   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain D from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee...eehhhhhhhhhhhhhhhhhhh...eeeee............ee.hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e D   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain E from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh...eeeee.................hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e E   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain F from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee.hhhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeee....................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.................hhhhh..eeeeee...eehhhhhhhhhhhhhhhhhhh...eeeee............ee.hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e F   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain G from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.hhhhhhh....eee..eee.....hhhhhhhhhhhhh.....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...eeee....................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh...eeeee...............hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e G   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain H from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeeee...................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee...eehhhhhhhhhhhhhhhhhhh..eeeeee............ee.hhhhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e H   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain I from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.hhhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhhh.....................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...eeee....................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh...eeeee.................hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e I   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain J from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee.hhhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..eeee....................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.hhhh............hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh...eeeee...............hhhhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e J   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain K from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.hhhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...eeee....................hhhhhhhhhhhhh....eeeee.....hhhhhhhhh....eeeeeeee.................hhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh..eeeeee...............hhhhhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e K   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 


Chain L from PDB  Type:PROTEIN  Length:341
 aligned with APAH_MYCRA | Q48935 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340 
           APAH_MYCRA     1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhh....eee..eee.....hhhhhhhhhhhhhh....ee........hhhhh.hhhhhhhhhhhhhhhhhh......................hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh....eeeee...................hhhhhhhhhhhhhh...eeeee.....hhhhhhhhh....eeeeeeee.................hhhhh..eeeeee...eehhhhhhhhhhhhhhhhhhh...eeeee............ee.hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q9e L   1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHAAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG 341
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3Q9E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3Q9E)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3Q9E)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (APAH_MYCRA | Q48935)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    K  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SP5  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Arg A:154 - Pro A:155   [ RasMol ]  
    Arg B:154 - Pro B:155   [ RasMol ]  
    Arg C:154 - Pro C:155   [ RasMol ]  
    Arg D:154 - Pro D:155   [ RasMol ]  
    Arg E:154 - Pro E:155   [ RasMol ]  
    Arg F:154 - Pro F:155   [ RasMol ]  
    Arg G:154 - Pro G:155   [ RasMol ]  
    Arg H:154 - Pro H:155   [ RasMol ]  
    Arg I:154 - Pro I:155   [ RasMol ]  
    Arg J:154 - Pro J:155   [ RasMol ]  
    Arg K:154 - Pro K:155   [ RasMol ]  
    Arg L:154 - Pro L:155   [ RasMol ]  
    Phe A:225 - Pro A:226   [ RasMol ]  
    Phe B:225 - Pro B:226   [ RasMol ]  
    Phe C:225 - Pro C:226   [ RasMol ]  
    Phe D:225 - Pro D:226   [ RasMol ]  
    Phe E:225 - Pro E:226   [ RasMol ]  
    Phe F:225 - Pro F:226   [ RasMol ]  
    Phe G:225 - Pro G:226   [ RasMol ]  
    Phe H:225 - Pro H:226   [ RasMol ]  
    Phe I:225 - Pro I:226   [ RasMol ]  
    Phe J:225 - Pro J:226   [ RasMol ]  
    Phe K:225 - Pro K:226   [ RasMol ]  
    Phe L:225 - Pro L:226   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]
    Biological Unit 5  [ Jena3D ]
    Biological Unit 6  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format | Biol. Unit 5 PNG format | Biol. Unit 6 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3q9e
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  APAH_MYCRA | Q48935
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  APAH_MYCRA | Q48935
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        APAH_MYCRA | Q48935: 3q9b 3q9c 3q9f 4zum 4zun 4zuo 4zup 4zuq 4zur

(-) Related Entries Specified in the PDB File

3q9b SAME ENZYME COMPLEXED WITH THE INHIBITOR M344
3q9c SAME ENZYME COMPLEXED WITH THE SUBSTRATE N8-ACETYLSPERMIDINE
3q9f SAME ENZYME COMPLEXED WITH CAPS