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(-) Description

Title :  STRUCTURE OF THE CLPP SUBUNIT OF THE ATP-DEPENDENT CLP PROTEASE FROM COXIELLA BURNETII
 
Authors :  S. M. Anderson, Z. Wawrzak, E. Gordon, J. Hasseman, W. F. Anderson, A. Sa Center For Structural Genomics Of Infectious Diseases (Csgi
Date :  04 Jan 11  (Deposition) - 12 Jan 11  (Release) - 13 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N
Keywords :  Structural Genomics, Csgid, Center For Structural Genomics Of Infectious Diseases, Alpha And Beta Protein, Clpp/Crotonase Fold, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. M. Anderson, Z. Wawrzak, E. Gordon, J. Hasseman, W. F. Anderson, A. Savchenko, Center For Structural Genomics Of Infectious Diseases (Csgid)
Structure Of The Clpp Subunit Of The Atp-Dependent Clp Protease From Coxiella Burnetii
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N
    EC Number3.4.21.92
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21-CODONPLUS(DE3)-RIPL
    Expression System Taxid469008
    GeneCLPP, COXBURSA331_A1213
    Organism ScientificCOXIELLA BURNETII
    Organism Taxid360115
    StrainRSA 493
    SynonymENDOPEPTIDASE CLP

 Structural Features

(-) Chains, Units

  1234567891011121314
Asymmetric/Biological Unit ABCDEFGHIJKLMN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 145)

Asymmetric/Biological Unit (3, 145)
No.NameCountTypeFull Name
1CA28Ligand/IonCALCIUM ION
2MSE84Mod. Amino AcidSELENOMETHIONINE
3PEG33Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (61, 61)

Asymmetric Unit (61, 61)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:158 , THR A:159 , PEG A:198BINDING SITE FOR RESIDUE PEG A 196
02AC2SOFTWARETYR A:130 , ILE A:137 , HIS A:140 , ALA A:141 , THR A:144 , HOH A:206 , TYR B:130 , ILE B:137 , HIS B:140 , ALA B:141BINDING SITE FOR RESIDUE PEG A 197
03AC3SOFTWARETHR A:159 , LYS A:161 , VAL A:182 , GLU A:183 , TYR A:184 , PEG A:196BINDING SITE FOR RESIDUE PEG A 198
04AC4SOFTWAREMSE A:82 , VAL A:85 , PRO A:87 , HOH A:409 , HOH A:664BINDING SITE FOR RESIDUE CA A 199
05AC5SOFTWARETYR B:64 , ARG B:90 , PHE B:191 , ARG B:194 , HOH B:878BINDING SITE FOR RESIDUE PEG B 196
06AC6SOFTWAREHIS B:158 , THR B:159 , GLY B:160 , PEG B:198BINDING SITE FOR RESIDUE PEG B 197
07AC7SOFTWARETHR B:159 , LYS B:161 , GLU B:183 , GLY B:185 , PEG B:197 , HOH B:1061BINDING SITE FOR RESIDUE PEG B 198
08AC8SOFTWAREMSE B:82 , VAL B:85 , PRO B:87 , HOH B:1142BINDING SITE FOR RESIDUE CA B 199
09AC9SOFTWAREVAL B:72 , LEU B:127BINDING SITE FOR RESIDUE CA B 200
10BC1SOFTWAREHIS C:158 , THR C:159BINDING SITE FOR RESIDUE PEG C 196
11BC2SOFTWAREPRO A:117 , LYS A:192 , TYR C:79 , ASP C:80 , GLN C:83 , PHE C:84 , HOH C:895BINDING SITE FOR RESIDUE PEG C 197
12BC3SOFTWAREPRO C:68 , GLY C:69 , GLY C:70 , ALA C:98 , SER C:99 , ALA C:100 , MSE C:122 , HIS C:124 , HOH C:212 , HOH C:924 , HOH C:1090BINDING SITE FOR RESIDUE PEG C 198
13BC4SOFTWAREMSE C:82 , VAL C:85 , PRO C:87 , HOH C:585 , HOH C:1350BINDING SITE FOR RESIDUE CA C 199
14BC5SOFTWAREVAL C:72 , LEU C:127BINDING SITE FOR RESIDUE CA C 200
15BC6SOFTWAREASN D:62 , ARG D:90BINDING SITE FOR RESIDUE PEG D 196
16BC7SOFTWAREMSE D:82 , VAL D:85 , PRO D:87 , HOH D:486 , HOH D:560BINDING SITE FOR RESIDUE CA D 197
17BC8SOFTWAREVAL D:72 , LEU D:127BINDING SITE FOR RESIDUE CA D 198
18BC9SOFTWARETYR E:130 , GLN E:131 , TYR F:130 , GLN F:131BINDING SITE FOR RESIDUE PEG E 196
19CC1SOFTWAREMSE E:82 , VAL E:85 , PRO E:87 , HOH E:200 , HOH E:597BINDING SITE FOR RESIDUE CA E 197
20CC2SOFTWAREGLU E:183BINDING SITE FOR RESIDUE CA E 198
21CC3SOFTWAREVAL E:72 , LEU E:127BINDING SITE FOR RESIDUE CA E 199
22CC4SOFTWAREHIS F:158 , THR F:159BINDING SITE FOR RESIDUE PEG F 196
23CC5SOFTWAREMSE F:82 , VAL F:85 , PRO F:87BINDING SITE FOR RESIDUE CA F 197
24CC6SOFTWAREVAL F:72 , LEU F:127BINDING SITE FOR RESIDUE CA F 198
25CC7SOFTWARELYS G:192 , GLU G:193 , ARG G:194 , HOH G:1217 , GLN I:83BINDING SITE FOR RESIDUE PEG G 196
26CC8SOFTWAREGLN G:36 , VAL G:37 , GLU G:38 , GLY G:70 , ALA G:71 , HOH G:745BINDING SITE FOR RESIDUE PEG G 197
27CC9SOFTWAREMSE G:82 , VAL G:85 , PRO G:87 , HOH G:205BINDING SITE FOR RESIDUE CA G 198
28DC1SOFTWAREVAL G:72 , LEU G:127BINDING SITE FOR RESIDUE CA G 199
29DC2SOFTWAREASN H:62 , TYR H:64 , PHE H:191 , ARG H:194 , HOH H:758 , HOH H:1119BINDING SITE FOR RESIDUE PEG H 196
30DC3SOFTWAREHIS H:158 , THR H:159BINDING SITE FOR RESIDUE PEG H 197
31DC4SOFTWAREILE H:139 , LYS H:142 , GLN H:143 , HOH H:241 , PHE J:175 , HOH J:736BINDING SITE FOR RESIDUE PEG H 198
32DC5SOFTWARETYR G:130 , ILE G:137 , ALA G:141 , TYR H:130 , ILE H:137 , HIS H:140 , ALA H:141 , THR H:144 , HOH H:552BINDING SITE FOR RESIDUE PEG H 199
33DC6SOFTWAREMSE H:82 , VAL H:85 , PRO H:87 , HOH H:667BINDING SITE FOR RESIDUE CA H 200
34DC7SOFTWAREVAL H:72 , LEU H:127BINDING SITE FOR RESIDUE CA H 201
35DC8SOFTWAREHIS G:118 , SER G:119 , SER G:120 , LEU G:176 , THR G:177 , GLN I:143 , ARG I:146 , GLN I:150 , HOH I:473BINDING SITE FOR RESIDUE PEG I 196
36DC9SOFTWARETYR I:130 , ILE I:137 , HIS I:140 , ALA I:141 , THR I:144 , TYR J:130 , ILE J:137 , HIS J:140 , ALA J:141 , HOH J:438BINDING SITE FOR RESIDUE PEG I 197
37EC1SOFTWARELYS I:161 , GLU I:180 , GLU I:183 , TYR I:184BINDING SITE FOR RESIDUE PEG I 198
38EC2SOFTWARETHR I:159 , LYS I:161 , GLU I:183 , TYR I:184BINDING SITE FOR RESIDUE PEG I 199
39EC3SOFTWAREMSE I:82 , VAL I:85 , PRO I:87 , HOH I:210BINDING SITE FOR RESIDUE CA I 200
40EC4SOFTWAREVAL I:72 , LEU I:127BINDING SITE FOR RESIDUE CA I 201
41EC5SOFTWAREGLN I:138 , GLN J:138 , ALA J:141 , LYS J:142 , GLN J:145BINDING SITE FOR RESIDUE PEG J 196
42EC6SOFTWARELYS J:157 , HIS J:158BINDING SITE FOR RESIDUE PEG J 197
43EC7SOFTWARETYR I:130 , GLN I:131 , HOH I:966 , TYR J:130 , GLN J:131BINDING SITE FOR RESIDUE PEG J 198
44EC8SOFTWAREMSE J:82 , VAL J:85 , PRO J:87 , HOH J:660 , HOH J:951BINDING SITE FOR RESIDUE CA J 199
45EC9SOFTWAREVAL J:72 , LEU J:127BINDING SITE FOR RESIDUE CA J 200
46FC1SOFTWARETYR K:130 , GLN K:131 , TYR L:130 , GLN L:131BINDING SITE FOR RESIDUE PEG K 196
47FC2SOFTWAREHIS K:158 , THR K:159 , GLY K:160BINDING SITE FOR RESIDUE PEG K 197
48FC3SOFTWAREMSE K:82 , VAL K:85 , PRO K:87 , HOH K:206BINDING SITE FOR RESIDUE CA K 198
49FC4SOFTWAREVAL K:72 , LEU K:127BINDING SITE FOR RESIDUE CA K 199
50FC5SOFTWARELYS L:59 , HOH L:267BINDING SITE FOR RESIDUE PEG L 196
51FC6SOFTWAREHIS L:158 , THR L:159 , HOH L:1108BINDING SITE FOR RESIDUE PEG L 197
52FC7SOFTWAREMSE L:82 , VAL L:85 , PRO L:87 , HOH L:525 , HOH L:605BINDING SITE FOR RESIDUE CA L 198
53FC8SOFTWAREVAL L:72 , LEU L:127BINDING SITE FOR RESIDUE CA L 199
54FC9SOFTWARELYS M:157 , THR M:159 , HOH M:314BINDING SITE FOR RESIDUE PEG M 196
55GC1SOFTWAREASN M:58 , HOH M:1009BINDING SITE FOR RESIDUE PEG M 197
56GC2SOFTWAREMSE M:82 , VAL M:85 , PRO M:87 , HOH M:588 , HOH M:689 , HOH M:769BINDING SITE FOR RESIDUE CA M 198
57GC3SOFTWAREVAL M:72 , VAL M:126 , LEU M:127BINDING SITE FOR RESIDUE CA M 199
58GC4SOFTWAREHIS N:158 , THR N:159 , GLY N:160BINDING SITE FOR RESIDUE PEG N 196
59GC5SOFTWARETYR B:22 , VAL B:34 , GLY B:35 , ASP N:39 , HIS N:40 , ASN N:43 , LEU N:44 , HOH N:724BINDING SITE FOR RESIDUE PEG N 197
60GC6SOFTWAREMSE N:82 , VAL N:85 , PRO N:87BINDING SITE FOR RESIDUE CA N 198
61GC7SOFTWAREVAL N:72 , LEU N:127BINDING SITE FOR RESIDUE CA N 199

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3Q7H)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3Q7H)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3Q7H)

(-) PROSITE Motifs  (1, 14)

Asymmetric/Biological Unit (1, 14)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CLP_PROTEASE_SERPS00381 Endopeptidase Clp serine active site.CLPP_COXBR91-102
 
 
 
 
 
 
 
 
 
 
 
 
 
  14A:91-102
B:91-102
C:91-102
D:91-102
E:91-102
F:91-102
G:91-102
H:91-102
I:91-102
J:91-102
K:91-102
L:91-102
M:91-102
N:91-102
CLPP_COXBU91-102
 
 
 
 
 
 
 
 
 
 
 
 
 
  14A:91-102
B:91-102
C:91-102
D:91-102
E:91-102
F:91-102
G:91-102
H:91-102
I:91-102
J:91-102
K:91-102
L:91-102
M:91-102
N:91-102

(-) Exons   (0, 0)

(no "Exon" information available for 3Q7H)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:186
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7ha_       A: automated matches                                                                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........------..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h A   4 LVPmVVEQ------AYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |   | -    |   23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               |  11     18                     41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                               7-MSE                                                                     82-MSE                                                                                                             

Chain A from PDB  Type:PROTEIN  Length:186
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7ha_       A: automated matches                                                                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........------..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h A   4 LVPmVVEQ------AYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |   | -    |   23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE     18                     41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain B from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hb_ B: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....eeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h B   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain B from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hb_ B: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....eeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h B   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain C from PDB  Type:PROTEIN  Length:191
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:191
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194 
           CLPP_COXBR     5 VPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hc_ C: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h C   5 VPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                              |     14        24        34      | 44    |   54        64        74 |     |84        94       104       114       124       134       144       154       164       174       184       194 
                              7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                        82-MSE                                                                                                             

Chain C from PDB  Type:PROTEIN  Length:191
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:191
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194 
           CLPP_COXBU     5 VPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hc_ C: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h C   5 VPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                              |     14        24        34      | 44    |   54        64        74 |     |84        94       104       114       124       134       144       154       164       174       184       194 
                              7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                        82-MSE                                                                                                             

Chain D from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hd_ D: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..eeeeeehhhhhhh..eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h D   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain D from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hd_ D: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..eeeeeehhhhhhh..eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h D   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain E from PDB  Type:PROTEIN  Length:187
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7he_ E     : automated matches                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........-----..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h E   4 LVPmVVEQT-----AYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    |-    |   23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE2    18                     41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain E from PDB  Type:PROTEIN  Length:187
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7he_ E     : automated matches                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........-----..hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h E   4 LVPmVVEQT-----AYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    |-    |   23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE2    18                     41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain F from PDB  Type:PROTEIN  Length:185
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hf_         F: automated matches                                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........--------.hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h F   3 VLVPmVVE--------YDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |  | -      | 22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE      19                    41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain F from PDB  Type:PROTEIN  Length:185
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hf_         F: automated matches                                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........--------.hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h F   3 VLVPmVVE--------YDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |  | -      | 22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE      19                    41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain G from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hg_ G: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....eeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h G   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain G from PDB  Type:PROTEIN  Length:193
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hg_ G: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....eeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h G   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain H from PDB  Type:PROTEIN  Length:191
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:191
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194 
           CLPP_COXBR     5 VPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hh_ H: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....eeeeehhhhhhh..eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h H   5 VPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                              |     14        24        34      | 44    |   54        64        74 |     |84        94       104       114       124       134       144       154       164       174       184       194 
                              7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                        82-MSE                                                                                                             

Chain H from PDB  Type:PROTEIN  Length:191
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:191
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194 
           CLPP_COXBU     5 VPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hh_ H: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....eeeeehhhhhhh..eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h H   5 VPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                              |     14        24        34      | 44    |   54        64        74 |     |84        94       104       114       124       134       144       154       164       174       184       194 
                              7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                        82-MSE                                                                                                             

Chain I from PDB  Type:PROTEIN  Length:189
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hi_ I   : automated matches                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..---.eeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h I   4 LVPmVVEQT---ERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    |-  |     23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE2  16                       41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain I from PDB  Type:PROTEIN  Length:189
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hi_ I   : automated matches                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..---.eeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h I   4 LVPmVVEQT---ERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    |-  |     23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE2  16                       41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain J from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hj_         J: automated matches                                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......--------.hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h J   4 LVPmVVE--------YDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |  |  -     |  23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE      19                    41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain J from PDB  Type:PROTEIN  Length:184
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hj_         J: automated matches                                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......--------.hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h J   4 LVPmVVE--------YDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |  |  -     |  23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE      19                    41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain K from PDB  Type:PROTEIN  Length:189
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hk_ K:     automated matches                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........----...hhhhhhhhh.eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h K   3 VLVPmVVEQT----RAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12    |   22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE2   17                      41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain K from PDB  Type:PROTEIN  Length:189
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:193
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192   
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hk_ K:     automated matches                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........----...hhhhhhhhh.eeeeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q7h K   3 VLVPmVVEQT----RAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                                |   12    |   22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192   
                                7-MSE2   17                      41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                          82-MSE                                                                                                             

Chain L from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hl_ L: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h L   4 LVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    13        23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain L from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hl_ L: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h L   4 LVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    13        23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain M from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBR     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hm_ M: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h M   4 LVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    13        23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain M from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  
           CLPP_COXBU     4 LVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
               SCOP domains d3q7hm_ M: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeeeeehhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..eeehhhhhhhh....ee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------CLP_PROTEASE--------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h M   4 LVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKERP 195
                               |    13        23        33       |43     |  53        63        73  |     83        93       103       113       123       133       143       153       163       173       183       193  
                               7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                     
                                                                                                         82-MSE                                                                                                             

Chain N from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBR | A9NDG0 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192  
           CLPP_COXBR     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKER 194
               SCOP domains d3q7hn_ N: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------CLP_protease-3q7hN01 N:13-194                                                                                                                                                          Pfam domains (1)
           Pfam domains (2) ----------CLP_protease-3q7hN02 N:13-194                                                                                                                                                          Pfam domains (2)
           Pfam domains (3) ----------CLP_protease-3q7hN03 N:13-194                                                                                                                                                          Pfam domains (3)
           Pfam domains (4) ----------CLP_protease-3q7hN04 N:13-194                                                                                                                                                          Pfam domains (4)
           Pfam domains (5) ----------CLP_protease-3q7hN05 N:13-194                                                                                                                                                          Pfam domains (5)
           Pfam domains (6) ----------CLP_protease-3q7hN06 N:13-194                                                                                                                                                          Pfam domains (6)
           Pfam domains (7) ----------CLP_protease-3q7hN07 N:13-194                                                                                                                                                          Pfam domains (7)
           Pfam domains (8) ----------CLP_protease-3q7hN08 N:13-194                                                                                                                                                          Pfam domains (8)
           Pfam domains (9) ----------CLP_protease-3q7hN09 N:13-194                                                                                                                                                          Pfam domains (9)
          Pfam domains (10) ----------CLP_protease-3q7hN10 N:13-194                                                                                                                                                          Pfam domains (10)
          Pfam domains (11) ----------CLP_protease-3q7hN11 N:13-194                                                                                                                                                          Pfam domains (11)
          Pfam domains (12) ----------CLP_protease-3q7hN12 N:13-194                                                                                                                                                          Pfam domains (12)
          Pfam domains (13) ----------CLP_protease-3q7hN13 N:13-194                                                                                                                                                          Pfam domains (13)
          Pfam domains (14) ----------CLP_protease-3q7hN14 N:13-194                                                                                                                                                          Pfam domains (14)
         Sec.struct. author .................hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------CLP_PROTEASE-------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h N   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKER 194
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192  
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                    
                                                                                                          82-MSE                                                                                                            

Chain N from PDB  Type:PROTEIN  Length:192
 aligned with CLPP_COXBU | Q83DJ2 from UniProtKB/Swiss-Prot  Length:195

    Alignment length:192
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192  
           CLPP_COXBU     3 VLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKER 194
               SCOP domains d3q7hn_ N: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------CLP_protease-3q7hN01 N:13-194                                                                                                                                                          Pfam domains (1)
           Pfam domains (2) ----------CLP_protease-3q7hN02 N:13-194                                                                                                                                                          Pfam domains (2)
           Pfam domains (3) ----------CLP_protease-3q7hN03 N:13-194                                                                                                                                                          Pfam domains (3)
           Pfam domains (4) ----------CLP_protease-3q7hN04 N:13-194                                                                                                                                                          Pfam domains (4)
           Pfam domains (5) ----------CLP_protease-3q7hN05 N:13-194                                                                                                                                                          Pfam domains (5)
           Pfam domains (6) ----------CLP_protease-3q7hN06 N:13-194                                                                                                                                                          Pfam domains (6)
           Pfam domains (7) ----------CLP_protease-3q7hN07 N:13-194                                                                                                                                                          Pfam domains (7)
           Pfam domains (8) ----------CLP_protease-3q7hN08 N:13-194                                                                                                                                                          Pfam domains (8)
           Pfam domains (9) ----------CLP_protease-3q7hN09 N:13-194                                                                                                                                                          Pfam domains (9)
          Pfam domains (10) ----------CLP_protease-3q7hN10 N:13-194                                                                                                                                                          Pfam domains (10)
          Pfam domains (11) ----------CLP_protease-3q7hN11 N:13-194                                                                                                                                                          Pfam domains (11)
          Pfam domains (12) ----------CLP_protease-3q7hN12 N:13-194                                                                                                                                                          Pfam domains (12)
          Pfam domains (13) ----------CLP_protease-3q7hN13 N:13-194                                                                                                                                                          Pfam domains (13)
          Pfam domains (14) ----------CLP_protease-3q7hN14 N:13-194                                                                                                                                                          Pfam domains (14)
         Sec.struct. author .................hhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh.....eee....eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeehhhhhhhhh...ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------CLP_PROTEASE-------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3q7h N   3 VLVPmVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHmANLAIAQmLFLESENPNKDINLYINSPGGAVTSAmAIYDTmQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVmIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFKER 194
                                |   12        22        32        42      | 52        62        72   |    82        92       102       112       122       132       142       152       162       172       182       192  
                                7-MSE                            41-MSE  49-MSE                     76-MSE |                                     122-MSE                                                                    
                                                                                                          82-MSE                                                                                                            

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 14)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3Q7H)

(-) Pfam Domains  (1, 14)

Asymmetric/Biological Unit

(-) Gene Ontology  (6, 12)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N   (CLPP_COXBU | Q83DJ2)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N   (CLPP_COXBR | A9NDG0)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

 Visualization

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