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(-) Description

Title :  STRUCTURE OF I274A VARIANT OF E. COLI KATE
 
Authors :  P. C. Loewen, V. Jha, S. Louis, P. Chelikani, X. Carpena, I. Fita
Date :  18 Oct 10  (Deposition) - 22 Dec 10  (Release) - 27 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Catalase, I274A Variant, Heme Orientation, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. Jha, S. Louis, P. Chelikani, X. Carpena, L. J. Donald, I. Fita, P. C. Loewen
Modulation Of Heme Orientation And Binding By A Single Residue In Catalase Hpii Of Escherichia Coli.
Biochemistry V. 50 2101 2011
PubMed-ID: 21332158  |  Reference-DOI: 10.1021/BI200027V

(-) Compounds

Molecule 1 - CATALASE HPII
    Chains: A, B, C, D
    EC Number: 1.11.1.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKS
    Expression System Strain: UM255
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: B1732, JW1721, KATE
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Synonym: HYDROXYPEROXIDASE II

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric/Biological Unit (3, 12)
No.NameCountTypeFull Name
1HDD4Ligand/IonCIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE
2HDE4Ligand/IonCIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE 17R, 18S
3OCS4Mod. Amino AcidCYSTEINESULFONIC ACID

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:125 , VAL A:127 , HIS A:128 , ARG A:165 , GLY A:184 , PHE A:185 , VAL A:199 , GLY A:200 , ASN A:201 , PHE A:206 , PHE A:214 , ALA A:274 , HIS A:275 , PHE A:391 , LEU A:407 , ARG A:411 , SER A:414 , TYR A:415 , THR A:418 , GLN A:419 , HOH A:793 , HOH A:849 , HOH A:879 , HOH A:2520 , HOH A:3345BINDING SITE FOR RESIDUE HDD A 760
2AC2SOFTWAREARG A:125 , VAL A:127 , HIS A:128 , ARG A:165 , GLY A:184 , VAL A:199 , GLY A:200 , ASN A:201 , ALA A:211 , PHE A:214 , GLY A:273 , ALA A:274 , PHE A:391 , LEU A:407 , ARG A:411 , SER A:414 , TYR A:415 , THR A:418 , GLN A:419 , HOH A:793 , HOH A:849 , HOH A:2520 , HOH A:3345BINDING SITE FOR RESIDUE HDE A 761
3AC3SOFTWAREARG B:125 , ILE B:126 , VAL B:127 , HIS B:128 , ARG B:165 , GLY B:184 , VAL B:199 , GLY B:200 , ASN B:201 , PHE B:206 , PHE B:214 , HIS B:275 , PHE B:391 , LEU B:407 , ARG B:411 , SER B:414 , TYR B:415 , THR B:418 , GLN B:419 , ARG B:422 , HOH B:851 , HOH B:904 , HOH B:933 , HOH B:2694 , HOH B:3346BINDING SITE FOR RESIDUE HDD B 760
4AC4SOFTWAREARG B:125 , VAL B:127 , HIS B:128 , ARG B:165 , GLY B:184 , VAL B:199 , GLY B:200 , ASN B:201 , ALA B:211 , PHE B:214 , GLY B:273 , PHE B:391 , LEU B:407 , ARG B:411 , SER B:414 , TYR B:415 , THR B:418 , GLN B:419 , HOH B:840 , HOH B:851 , HOH B:904 , HOH B:2694 , HOH B:3346BINDING SITE FOR RESIDUE HDE B 761
5AC5SOFTWAREARG C:125 , VAL C:127 , HIS C:128 , ARG C:165 , GLY C:184 , VAL C:199 , GLY C:200 , ASN C:201 , PHE C:206 , PHE C:214 , HIS C:275 , PHE C:391 , LEU C:407 , ARG C:411 , SER C:414 , TYR C:415 , THR C:418 , GLN C:419 , HOH C:871 , HOH C:929 , HOH C:2594 , HOH C:3347BINDING SITE FOR RESIDUE HDD C 760
6AC6SOFTWAREARG C:125 , VAL C:127 , HIS C:128 , ARG C:165 , GLY C:184 , VAL C:199 , GLY C:200 , ASN C:201 , ALA C:211 , PHE C:214 , GLY C:273 , ALA C:274 , PHE C:391 , LEU C:407 , ARG C:411 , SER C:414 , TYR C:415 , THR C:418 , GLN C:419 , HOH C:871 , HOH C:929 , HOH C:1263 , HOH C:2594 , HOH C:3347BINDING SITE FOR RESIDUE HDE C 761
7AC7SOFTWAREARG D:125 , VAL D:127 , HIS D:128 , ARG D:165 , GLY D:184 , VAL D:199 , GLY D:200 , ASN D:201 , PHE D:206 , PHE D:214 , ALA D:274 , PHE D:391 , LEU D:407 , ARG D:411 , SER D:414 , TYR D:415 , THR D:418 , GLN D:419 , HOH D:1295 , HOH D:1353 , HOH D:1388 , HOH D:3200 , HOH D:3348BINDING SITE FOR RESIDUE HDD D 760
8AC8SOFTWAREARG D:125 , VAL D:127 , HIS D:128 , ARG D:165 , GLY D:184 , VAL D:199 , GLY D:200 , ASN D:201 , ALA D:211 , PHE D:214 , GLY D:273 , PHE D:391 , LEU D:407 , ARG D:411 , SER D:414 , TYR D:415 , THR D:418 , GLN D:419 , HOH D:1295 , HOH D:1353 , HOH D:3200 , HOH D:3348BINDING SITE FOR RESIDUE HDE D 761

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3P9S)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1Ile A:229 -Pro A:230
2Glu A:461 -Pro A:462
3Trp A:469 -Pro A:470
4Ile B:229 -Pro B:230
5Glu B:461 -Pro B:462
6Trp B:469 -Pro B:470
7Ile C:229 -Pro C:230
8Glu C:461 -Pro C:462
9Trp C:469 -Pro C:470
10Ile D:229 -Pro D:230
11Glu D:461 -Pro D:462
12Trp D:469 -Pro D:470

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3P9S)

(-) PROSITE Motifs  (3, 12)

Asymmetric/Biological Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CATALASE_3PS51402 catalase family profile.CATE_ECOLI77-568
 
 
 		  4A:77-568
B:77-568
C:77-568
D:77-568
2CATALASE_2PS00438 Catalase proximal active site signature.CATE_ECOLI117-133
 
 
 		  4A:117-133
B:117-133
C:117-133
D:117-133
3CATALASE_1PS00437 Catalase proximal heme-ligand signature.CATE_ECOLI411-419
 
 
 		  4A:411-419
B:411-419
C:411-419
D:411-419

(-) Exons   (0, 0)

(no "Exon" information available for 3P9S)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:726
 aligned with CATE_ECOLI | P21179 from UniProtKB/Swiss-Prot  Length:753

    Alignment length:726
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747      
           CATE_ECOLI    28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
               SCOP domains d3p9sa1 A:28-597 automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        d3p9sa2 A:598-753 automated matches                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........................hhhhhh....hhhhhhh...ee.....................eee.........hhhhhhhhhhhhh...........eeeeeeeeee.........hhhhh.....eeeeeeee................eeeeeeee..eeeeeeee........hhhhhhhhhhhhh.............hhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhh.ee....eeee.....eeeeeeeeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhh...eeeeeeeeee.hhh.....................eeeeeeeeee...hhhhhh.............ee...hhhhhhhhhhhhhhhhhhh...hhhhhhhhh.................ee.................................eeeeeee...hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh...hhhhhh............hhhhh............eeeee.....hhhhhhhhhhhhhhh..eeeeee....eee.....eee..ee....hhhhh.eeee....hhhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhh..........eeee...hhhhhhhhhhhhhh..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------------------CATALASE_3  PDB: A:77-568 UniProt: 77-568                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------CATALASE_2       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATALASE_---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3p9s A  28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGAHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPcGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667 |     677       687       697       707       717       727       737       747      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           669-OCS                                                                                


Chain B from PDB  Type:PROTEIN  Length:726
 aligned with CATE_ECOLI | P21179 from UniProtKB/Swiss-Prot  Length:753

    Alignment length:726
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747      
           CATE_ECOLI    28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
               SCOP domains d3p9sb1 B:28-597 automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        d3p9sb2 B:598-753 automated matches                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........................hhhhhh....hhhhhhh...ee.....................eee.........hhhhhhhhhhhhh...........eeeeeeeeee.........hhhhh.....eeeeeeee................eeeeeeee..eeeeeeee........hhhhhhhhhhhhh.............hhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhh.ee....eeee.....eeeeeeeeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhh...eeeeeeeeee.hhh....................eeeeeeeeeee...hhhhhh.............ee...hhhhhhhhhhhhhhhhhhh...hhhhhhhhh.................ee.................................eeeeeee...hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhh............hhhhh............eeeee.....hhhhhhhhhhhhhhh..eeeeee....eee.....eee..ee....hhhhh.eeee....hhhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhh..........eeee...hhhhhhhhhhhhhh..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------------------CATALASE_3  PDB: B:77-568 UniProt: 77-568                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------CATALASE_2       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATALASE_---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3p9s B  28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGAHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPcGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667 |     677       687       697       707       717       727       737       747      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           669-OCS                                                                                


Chain C from PDB  Type:PROTEIN  Length:726
 aligned with CATE_ECOLI | P21179 from UniProtKB/Swiss-Prot  Length:753

    Alignment length:726
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747      
           CATE_ECOLI    28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
               SCOP domains d3p9sc1 C:28-597 automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        d3p9sc2 C:598-753 automated matches                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........................hhhhhh....hhhhhhh...ee......................ee.........hhhhhhhhhhhhh...........eeeeeeeeee.........hhhhh.....eeeeeeee................eeeeeeee..eeeeeeee........hhhhhhhhhhhhh.............hhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhh.ee....eeee.....eeeeeeeeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhh...eeeeeeeeee.hhh....................eeeeeeeeeee...hhhhhh.............ee...hhhhhhhhhhhhhhhhhhh...hhhhhhhhh.................ee.................................eeeeeeee..hhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh...hhhhhh............hhhhh............eeeee.....hhhhhhhhhhhhhhh..eeeeee....eee.....eee..ee....hhhhh.eeee...hhhhh..hhhhhhhhhhhhhh...eeee.hhhhhhh...........eeee.....hhhhhhhhhhhh..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------------------CATALASE_3  PDB: C:77-568 UniProt: 77-568                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------CATALASE_2       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATALASE_---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3p9s C  28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGAHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPcGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667 |     677       687       697       707       717       727       737       747      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           669-OCS                                                                                


Chain D from PDB  Type:PROTEIN  Length:726
 aligned with CATE_ECOLI | P21179 from UniProtKB/Swiss-Prot  Length:753

    Alignment length:726
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747      
           CATE_ECOLI    28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
               SCOP domains d3p9sd1 D:28-597 automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        d3p9sd2 D:598-753 automated matches                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........................hhhhhh....hhhhhhh...ee......................ee.........hhhhhhhhhhhhh...........eeeeeeeeee.........hhhhh.....eeeeeeee................eeeeeeee..eeeeeeee........hhhhhhhhhhhhh.............hhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhh.ee....eeee.....eeeeeeeeee.......hhhhhhhhhhhh.hhhhhhhhhhhhh....eeeeeeeeee.hhh....................eeeeeeeeeee...hhhhhh.............ee...hhhhhhhhhhhhhhhhhhh...hhhhhhhhh.................ee.................................eeeeeeee..hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhh............hhhhh............eeeee.....hhhhhhhhhhhhhhh..eeeeee....eee.....eee..ee....hhhhh.eeee....hhhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhh........eeee.....hhhhhhhhhhhh..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------------------CATALASE_3  PDB: D:77-568 UniProt: 77-568                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------CATALASE_2       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATALASE_---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3p9s D  28 SLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGAHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPcGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA 753
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667 |     677       687       697       707       717       727       737       747      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           669-OCS
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3P9S)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3P9S)

(-) Gene Ontology  (16, 16)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (CATE_ECOLI | P21179)
molecular function
    GO:0004096    catalase activity    Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
biological process
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0006974    cellular response to DNA damage stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
    GO:0042744    hydrogen peroxide catabolic process    The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).
    GO:0006972    hyperosmotic response    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0042542    response to hydrogen peroxide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0006979    response to oxidative stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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  CATE_ECOLI | P21179
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CATE_ECOLI | P21179: 1cf9 1gg9 1gge 1ggf 1ggh 1ggj 1ggk 1iph 1p7y 1p7z 1p80 1p81 1qf7 1qws 1ye9 3p9p 3p9q 3p9r 3pq2 3pq3 3pq4 3pq5 3pq6 3pq7 3pq8 3ttt 3ttu 3ttv 3ttw 3ttx 3vu3 4bfl 4enp 4enq 4enr 4ens 4ent 4enu 4env 4enw 5bv2

(-) Related Entries Specified in the PDB File

3p9p 3p9q 3p9r