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(-) Description

Title :  THE STRUCTURE OF AN ALPHA/BETA FOLD FAMILY HYDROLASE FROM BACILLUS ANTHRACIS STR. STERNE
 
Authors :  Y. Fan, K. Tan, L. Bigelow, J. Hamilton, H. Li, Y. Zhou, S. Clancy, K. Buck A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  31 Aug 10  (Deposition) - 10 Nov 10  (Release) - 10 Nov 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Apc67239. 0, Protein Structure Initiative, Psi-2, Structural Genomics, Midwest Center For Structural Genomics, Mcsg, Medical Structural Genomics Of Pathogenic Protozoa, Msgpp, Alpha/Beta Fold Family, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Fan, K. Tan, L. Bigelow, J. Hamilton, H. Li, Y. Zhou, S. Clancy, K. Buck, A. Joachimiak
The Structure Of An Alpha/Beta Fold Family Hydrolase From Bacillus Anthracis Str. Sterne
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ALPHA/BETA HYDROLASE FAMILY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAS2502, BA_2687, GBAA2687, GBAA_2687
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 260799
    Strain: STERNE
    Synonym: HYDROLASE, ALPHA/BETA FOLD FAMILY

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 11)

Asymmetric/Biological Unit (4, 11)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2MSE5Mod. Amino AcidSELENOMETHIONINE
3PG43Ligand/IonTETRAETHYLENE GLYCOL
4SO41Ligand/IonSULFATE ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:29 , TYR A:31 , SER A:98 , ALA A:99 , GLN A:233 , HIS A:259 , PG4 A:281 , HOH A:598BINDING SITE FOR RESIDUE SO4 A 278
2AC2SOFTWAREARG A:146 , SER A:149 , ALA A:153 , GLU A:163 , THR A:250 , LEU A:251 , HOH A:487 , HOH A:639 , HOH A:643 , HOH A:647BINDING SITE FOR RESIDUE GOL A 279
3AC3SOFTWARETYR A:137 , ARG A:164 , SER A:168 , TRP A:171 , HOH A:326BINDING SITE FOR RESIDUE PG4 A 280
4AC4SOFTWARETYR A:31 , SER A:98 , TYR A:129 , TYR A:137 , PHE A:202 , ARG A:203 , TYR A:207 , GLN A:233 , CYS A:234 , SO4 A:278 , HOH A:338BINDING SITE FOR RESIDUE PG4 A 281
5AC5SOFTWAREGLU A:33 , ASN A:35 , SER A:191 , GLY A:192 , LYS A:193 , GOL A:283 , HOH A:500 , HOH A:545 , HOH A:548BINDING SITE FOR RESIDUE PG4 A 282
6AC6SOFTWAREASN A:190 , GLY A:192 , PG4 A:282 , HOH A:542 , HOH A:545BINDING SITE FOR RESIDUE GOL A 283

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3OOS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3OOS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 3OOS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:278
 aligned with Q81PV7_BACAN | Q81PV7 from UniProtKB/TrEMBL  Length:277

    Alignment length:278
                             1                                                                                                                                                                                                                                                                                    
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269        
         Q81PV7_BACAN     - -MWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL 277
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------Abhydrolase_6-3oosA01 A:27-272                                                                                                                                                                                                                        ----- Pfam domains
         Sec.struct. author ...eeeeeee..eeeeeeee....eeee....ee........hhhhhhh.eeeee............hhhhhhhhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhh..eeeeeee....hhhhhhh..........hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.hhhhhhhhh......eehhhhhhhhhhhhhhhh.hhhhhh.....eeeeee......hhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3oos A   0 AmWTTNIIKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSmTETIKDLEAIREALYINKWGFAGHSAGGmLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSImNALNDDSTVQEERKALSREWALmSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL 277
                             |       9        19        29        39        49        59        69   |    79        89        99  |    109       119       129       139       149 |     159       169    |  179       189       199       209       219       229       239       249       259       269        
                             |                                                                      73-MSE                      102-MSE                                          151-MSE                174-MSE                                                                                                   
                             1-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3OOS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3OOS)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: AB_hydrolase (347)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q81PV7_BACAN | Q81PV7)
molecular function
    GO:0004177    aminopeptidase activity    Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

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