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Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE WLBA (WBPB) DEHYDROGENASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH NAD AND UDP-GLCNACA

Authors :   H. M. Holden, J. B. Thoden

Date :   04 Aug 10 (Deposition) - 18 Aug 10 (Release) - 22 Sep 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Oxidoreductase, Sugar Biosynthesis, Dehydrogenase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. B. Thoden, H. M. Holden
Structural And Functional Studies Of Wlba: A Dehydrogenase Involved In The Biosynthesis Of 2, 3-Diacetamido-2, 3-Dideoxy-D-Mannuronic Acid .
Biochemistry V. 49 7939 2010
PubMed-ID: 20690587 | Reference-DOI: 10.1021/BI101103S

Molecule 1 - LIPOPOLYSACCARIDE BIOSYNTHESIS PROTEIN WBPB
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28
	Expression System Strain	:	ROSETTA2(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	TT_C0287, WBPB
	Organism Scientific	:	THERMUS THERMOPHILUS HB27
	Organism Taxid	:	262724
	Strain	:	HB27 / ATCC BAA-163 / DSM 7039

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 12)

No.	Name	Count	Type	Full Name
1	CL	4	Ligand/Ion	CHLORIDE ION
2	HP7	4	Ligand/Ion	(2S,3S,4R,5R,6R)-5-ACETAMIDO-6-[[[(2R,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXY-HYDROXY-PHOSPHORYL]OXY-HYDROXY-PHOSPHORYL]OXY-3,4-DIHYDROXY-OXANE-2-CARBOXYLIC ACID
3	NAD	4	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:8 , ALA A:10 , GLY A:11 , TYR A:12 , ILE A:13 , ARG A:16 , LEU A:32 , ASP A:33 , PRO A:34 , ALA A:35 , ALA A:77 , SER A:78 , PRO A:79 , ASN A:80 , LEU A:82 , HIS A:83 , GLN A:86 , GLU A:100 , LYS A:101 , GLN A:129 , TRP A:168 , LYS A:169 , HIS A:264 , HP7 A:312 , HOH A:316 , HOH A:342 , HOH A:345 , HOH A:350 , HOH A:351 , HOH A:353 , ASN B:37 , HOH B:343 , GLU D:55	BINDING SITE FOR RESIDUE NAD A 311
02	AC2	SOFTWARE	TYR A:12 , ARG A:16 , LYS A:101 , TYR A:156 , THR A:158 , ARG A:160 , TRP A:163 , TYR A:164 , LYS A:169 , ASN A:181 , HIS A:185 , NAD A:311 , HOH A:445 , GLY B:39 , LEU B:40 , HOH B:344	BINDING SITE FOR RESIDUE HP7 A 312
03	AC3	SOFTWARE	THR A:52 , GLU A:53 , LYS B:166	BINDING SITE FOR RESIDUE CL A 313
04	AC4	SOFTWARE	ASN A:37 , HOH A:321 , GLY B:8 , ALA B:10 , GLY B:11 , TYR B:12 , ILE B:13 , LEU B:32 , ASP B:33 , PRO B:34 , ALA B:35 , ALA B:77 , SER B:78 , PRO B:79 , ASN B:80 , LEU B:82 , HIS B:83 , GLN B:86 , GLU B:100 , LYS B:101 , GLN B:129 , TRP B:168 , LYS B:169 , ASN B:181 , HIS B:185 , HP7 B:312 , HOH B:315 , HOH B:316 , HOH B:318 , HOH B:382 , GLU C:55 , HOH C:342	BINDING SITE FOR RESIDUE NAD B 311
05	AC5	SOFTWARE	GLY A:39 , LEU A:40 , ASP A:42 , HOH A:359 , TYR B:12 , ARG B:16 , LYS B:101 , TYR B:156 , ARG B:160 , TRP B:163 , TYR B:164 , LYS B:169 , ILE B:182 , HIS B:185 , THR B:243 , ARG B:245 , NAD B:311 , HOH B:367	BINDING SITE FOR RESIDUE HP7 B 312
06	AC6	SOFTWARE	LYS A:166 , PHE B:51 , THR B:52 , GLU B:53	BINDING SITE FOR RESIDUE CL B 313
07	AC7	SOFTWARE	GLU B:55 , HOH B:323 , GLY C:8 , ALA C:10 , GLY C:11 , TYR C:12 , ILE C:13 , LEU C:32 , ASP C:33 , PRO C:34 , ALA C:35 , ALA C:77 , SER C:78 , PRO C:79 , ASN C:80 , LEU C:82 , HIS C:83 , GLN C:86 , GLU C:100 , LYS C:101 , GLN C:129 , TRP C:168 , LYS C:169 , ASN C:181 , HIS C:185 , HIS C:264 , HP7 C:312 , HOH C:320 , HOH C:331 , HOH C:333 , HOH C:334 , HOH C:335 , HOH C:384	BINDING SITE FOR RESIDUE NAD C 311
08	AC8	SOFTWARE	TYR C:12 , ARG C:16 , LYS C:101 , TYR C:156 , ARG C:160 , TRP C:163 , TYR C:164 , LYS C:169 , ASN C:181 , HIS C:185 , THR C:243 , ARG C:245 , NAD C:311 , GLY D:39 , LEU D:40 , HOH D:368	BINDING SITE FOR RESIDUE HP7 C 312
09	AC9	SOFTWARE	PHE C:51 , THR C:52 , GLU C:53 , LYS D:166	BINDING SITE FOR RESIDUE CL C 313
10	BC1	SOFTWARE	GLU A:55 , HOH A:367 , ASN C:37 , HOH C:336 , GLY D:8 , ALA D:10 , GLY D:11 , TYR D:12 , ILE D:13 , LEU D:32 , ASP D:33 , PRO D:34 , ALA D:35 , ALA D:77 , SER D:78 , PRO D:79 , ASN D:80 , LEU D:82 , HIS D:83 , GLN D:86 , GLU D:100 , LYS D:101 , GLN D:129 , TRP D:168 , LYS D:169 , ASN D:181 , HIS D:185 , HP7 D:312 , HOH D:321 , HOH D:322 , HOH D:324 , HOH D:364 , HOH D:400 , HOH D:402	BINDING SITE FOR RESIDUE NAD D 311
11	BC2	SOFTWARE	GLY C:39 , LEU C:40 , HOH C:337 , TYR D:12 , ARG D:16 , LYS D:101 , TYR D:156 , THR D:158 , ARG D:160 , TRP D:163 , TYR D:164 , LYS D:169 , ASN D:181 , ILE D:182 , HIS D:185 , THR D:243 , ARG D:245 , NAD D:311 , HOH D:433	BINDING SITE FOR RESIDUE HP7 D 312
12	BC3	SOFTWARE	LYS C:166 , PHE D:51 , THR D:52 , GLU D:53	BINDING SITE FOR RESIDUE CL D 313

(no "SS Bond" information available for 3OA0)

Asymmetric/Biological Unit

No.	Residues
1	Lys A:101	-	Pro A:102
2	Lys B:101	-	Pro B:102
3	Lys C:101	-	Pro C:102
4	Lys D:101	-	Pro D:102

(no "SAP(SNP)/Variant" information available for 3OA0)

(no "PROSITE Motif" information available for 3OA0)

(no "Exon" information available for 3OA0)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:310
 aligned with Q72KX8_THET2 | Q72KX8 from UniProtKB/TrEMBL  Length:310

    Alignment length:310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310
         Q72KX8_THET2     1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....hhhhhhhhhhhh..eeeeee.....hhhhhhh....eee.hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee...eeeeeeee..eeeeeeee.hhhhhhhhhhh....eeeeeee..ee........hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3oa0 A   1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310

Chain B from PDB  Type:PROTEIN  Length:310
 aligned with Q72KX8_THET2 | Q72KX8 from UniProtKB/TrEMBL  Length:310

    Alignment length:310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310
         Q72KX8_THET2     1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....hhhhhhhhhhhh..eeeeee.....hhhhhhh....eee.hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee...eeeeeeee..eeeeeeee.hhhhhhhhhhhh...eeeeeee..eeee......hhhhhhhhhhhh...eehhhhhhhhhhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3oa0 B   1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310

Chain C from PDB  Type:PROTEIN  Length:310
 aligned with Q72KX8_THET2 | Q72KX8 from UniProtKB/TrEMBL  Length:310

    Alignment length:310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310
         Q72KX8_THET2     1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....hhhhhhhhhhhh..eeeeee.....hhhhhhh....eee.hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee...eeeeeeee..eeeeeeee.hhhhhhhhhhh....eeeeeee...eee......hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.....hhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3oa0 C   1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFLG 310
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310

Chain D from PDB  Type:PROTEIN  Length:307
 aligned with Q72KX8_THET2 | Q72KX8 from UniProtKB/TrEMBL  Length:310

    Alignment length:309
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300         
         Q72KX8_THET2     1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEGFTDLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFL 309
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -GFO_IDH_MocA-3oa0D01 D:2-128                                                                                                   -----------GFO_IDH_MocA_C-3oa0D05 D:140-232                                                             ----------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -GFO_IDH_MocA-3oa0D02 D:2-128                                                                                                   -----------GFO_IDH_MocA_C-3oa0D06 D:140-232                                                             ----------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -GFO_IDH_MocA-3oa0D03 D:2-128                                                                                                   -----------GFO_IDH_MocA_C-3oa0D07 D:140-232                                                             ----------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -GFO_IDH_MocA-3oa0D04 D:2-128                                                                                                   -----------GFO_IDH_MocA_C-3oa0D08 D:140-232                                                             ----------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author ..eeeee.....hhhhhhhhhhhh..eeeeee.....hhhhhhh....eee.hhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhh.....eeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee...eeeeeeee..eeeeeeee.hhhhhhhhhhh....eeeeeee..eeee....--hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.....hhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3oa0 D   1 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFGRALHVEVHARTPTVNAGYLELEGARVRWFLSIDPSFVPEPLRRQGKRTYRSIAVDGEEVEFSEG--DLHTEVYRKTLAGEGFGLDEAAEAIRVAALLRTLPLSQPSPENRHPFL 309
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250        |- |     270       280       290       300         
                                                                                                                                                                                                                                                                                            259  |                                               
                                                                                                                                                                                                                                                                                               262

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3OA0)

(no "CATH Domain" information available for 3OA0)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (Q72KX8_THET2 | Q72KX8)

molecular function
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
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	Ligands, Modified Residues, Ions
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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	Cis Peptide Bonds
		Lys A:101 - Pro A:102	[ RasMol ]
		Lys B:101 - Pro B:102	[ RasMol ]
		Lys C:101 - Pro C:102	[ RasMol ]
		Lys D:101 - Pro D:102	[ RasMol ]

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	3oa0
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UniProtKB/TrEMBL
	Q72KX8_THET2 \| Q72KX8	:	3o9z

3o9z	HOMOLOGUE FROM THERMUS THERMOPHILUS IN COMPLEX WITH NAD AND ALPHA-KETOGLUTARATE
3oa2	HOMOLOGUE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NAD

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 12)

Sites (12, 12)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (2, 8)

Gene Ontology (4, 4)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File