Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF THE TYPE III GLUTAMINE SYNTHETASE FROM BACTEROIDES FRAGILIS
 
Authors :  J. M. Van Rooyen, H. Belrhali, V. R. Abratt, B. T. Sewell
Date :  29 Jul 10  (Deposition) - 09 Mar 11  (Release) - 20 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Glutamine Synthetase, Type Iii, Beta Barrel, Dodecamer, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Van Rooyen, V. R. Abratt, H. Belrhali, T. Sewell
Crystal Structure Of Type Iii Glutamine Synthetase: Surprising Reversal Of The Inter-Ring Interface.
Structure V. 19 471 2011
PubMed-ID: 21481771  |  Reference-DOI: 10.1016/J.STR.2011.02.001
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLUTAMINE SYNTHETASE
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PECO-R251
    Expression System Strain: YMC-11
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BF0955, GLNA, GLNN
    Organism Scientific: BACTEROIDES FRAGILIS
    Organism Taxid: 272559
    Strain: BF-1

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 36)

Asymmetric/Biological Unit (4, 36)
No.NameCountTypeFull Name
1ADP6Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL12Ligand/IonCHLORIDE ION
3MG12Ligand/IonMAGNESIUM ION
4P3S6Ligand/IonL-METHIONINE-S-SULFOXIMINE PHOSPHATE

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:215 , HIS A:342 , GLU A:472 , ARG A:474 , P3S A:3001 , ADP A:4001BINDING SITE FOR RESIDUE MG A 1001
02AC2SOFTWAREGLU A:217 , GLU A:286 , GLU A:293 , P3S A:3001BINDING SITE FOR RESIDUE MG A 2001
03AC3SOFTWAREGLU A:215 , GLU A:217 , GLU A:286 , VAL A:287 , GLU A:293 , GLY A:338 , SER A:339 , GLY A:340 , HIS A:342 , ARG A:398 , GLU A:403 , MG A:1001 , MG A:2001 , ADP A:4001BINDING SITE FOR RESIDUE P3S A 3001
04AC4SOFTWAREGLY A:213 , TRP A:214 , GLU A:215 , GLU A:293 , PRO A:296 , PHE A:298 , ASN A:344 , SER A:346 , ASN A:469 , ARG A:470 , GLU A:472 , ARG A:474 , MG A:1001 , P3S A:3001BINDING SITE FOR RESIDUE ADP A 4001
05AC5SOFTWARELYS A:721 , ARG A:723 , ASN B:613 , HIS B:614BINDING SITE FOR RESIDUE CL A 5001
06AC6SOFTWAREGLN A:601 , ARG A:605 , ARG A:674 , ASN A:678BINDING SITE FOR RESIDUE CL A 6001
07AC7SOFTWAREGLU B:215 , HIS B:342 , GLU B:472 , P3S B:3001 , ADP B:4001BINDING SITE FOR RESIDUE MG B 1001
08AC8SOFTWAREGLU B:217 , GLU B:286 , GLU B:293 , P3S B:3001BINDING SITE FOR RESIDUE MG B 2001
09AC9SOFTWAREGLU B:215 , GLU B:217 , GLU B:286 , GLY B:338 , SER B:339 , GLY B:340 , HIS B:342 , ARG B:398 , GLU B:403 , MG B:1001 , MG B:2001 , ADP B:4001BINDING SITE FOR RESIDUE P3S B 3001
10BC1SOFTWAREGLY B:213 , TRP B:214 , GLU B:215 , GLU B:293 , PRO B:296 , PHE B:298 , ASN B:344 , SER B:346 , ARG B:470 , GLU B:472 , MG B:1001 , P3S B:3001BINDING SITE FOR RESIDUE ADP B 4001
11BC2SOFTWARELYS B:721 , ARG B:723 , ASN C:613 , HIS C:614BINDING SITE FOR RESIDUE CL B 5001
12BC3SOFTWAREGLN B:601 , ARG B:605 , ARG B:674 , ASN B:678BINDING SITE FOR RESIDUE CL B 6001
13BC4SOFTWAREGLU C:215 , HIS C:342 , GLU C:472 , P3S C:3001 , ADP C:4001BINDING SITE FOR RESIDUE MG C 1001
14BC5SOFTWAREGLU C:217 , GLU C:286 , GLU C:293 , P3S C:3001BINDING SITE FOR RESIDUE MG C 2001
15BC6SOFTWAREGLU C:215 , GLU C:217 , GLU C:286 , GLY C:338 , SER C:339 , GLY C:340 , HIS C:342 , ARG C:398 , GLU C:403 , MG C:1001 , MG C:2001 , ADP C:4001BINDING SITE FOR RESIDUE P3S C 3001
16BC7SOFTWAREGLY C:213 , TRP C:214 , GLU C:215 , GLU C:293 , PRO C:296 , PHE C:298 , ASN C:344 , SER C:346 , ARG C:470 , GLU C:472 , MG C:1001 , P3S C:3001BINDING SITE FOR RESIDUE ADP C 4001
17BC8SOFTWARELYS C:721 , ARG C:723 , ASN D:613BINDING SITE FOR RESIDUE CL C 5001
18BC9SOFTWAREGLN C:601 , ARG C:605 , ARG C:674 , ASN C:678BINDING SITE FOR RESIDUE CL C 6001
19CC1SOFTWAREGLU D:215 , HIS D:342 , GLU D:472 , P3S D:3001 , ADP D:4001BINDING SITE FOR RESIDUE MG D 1001
20CC2SOFTWAREGLU D:217 , GLU D:286 , GLU D:293 , P3S D:3001BINDING SITE FOR RESIDUE MG D 2001
21CC3SOFTWAREGLU D:215 , GLU D:217 , GLU D:286 , GLY D:338 , SER D:339 , GLY D:340 , HIS D:342 , ARG D:398 , GLU D:403 , MG D:1001 , MG D:2001 , ADP D:4001BINDING SITE FOR RESIDUE P3S D 3001
22CC4SOFTWAREGLY D:213 , TRP D:214 , GLU D:215 , GLU D:293 , PRO D:296 , PHE D:298 , ASN D:344 , SER D:346 , ARG D:470 , GLU D:472 , MG D:1001 , P3S D:3001BINDING SITE FOR RESIDUE ADP D 4001
23CC5SOFTWARELYS D:721 , ARG D:723 , ASN E:613 , HIS E:614BINDING SITE FOR RESIDUE CL D 5001
24CC6SOFTWAREGLN D:601 , ARG D:605 , ARG D:674 , ASN D:678BINDING SITE FOR RESIDUE CL D 6001
25CC7SOFTWAREGLU E:215 , HIS E:342 , GLU E:472 , P3S E:3001 , ADP E:4001BINDING SITE FOR RESIDUE MG E 1001
26CC8SOFTWAREGLU E:217 , GLU E:286 , GLU E:293 , P3S E:3001BINDING SITE FOR RESIDUE MG E 2001
27CC9SOFTWAREGLU E:215 , GLU E:217 , GLU E:286 , GLY E:338 , SER E:339 , GLY E:340 , HIS E:342 , ARG E:398 , GLU E:403 , MG E:1001 , MG E:2001 , ADP E:4001BINDING SITE FOR RESIDUE P3S E 3001
28DC1SOFTWAREGLY E:213 , TRP E:214 , GLU E:215 , GLU E:293 , PRO E:296 , PHE E:298 , ASN E:344 , SER E:346 , ARG E:470 , GLU E:472 , MG E:1001 , P3S E:3001BINDING SITE FOR RESIDUE ADP E 4001
29DC2SOFTWARELYS E:721 , ARG E:723 , ASN F:613 , HIS F:614BINDING SITE FOR RESIDUE CL E 5001
30DC3SOFTWAREGLN E:601 , ARG E:605 , ARG E:674 , ASN E:678BINDING SITE FOR RESIDUE CL E 6001
31DC4SOFTWAREGLU F:215 , HIS F:342 , GLU F:472 , P3S F:3001 , ADP F:4001BINDING SITE FOR RESIDUE MG F 1001
32DC5SOFTWAREGLU F:217 , GLU F:286 , GLU F:293 , P3S F:3001BINDING SITE FOR RESIDUE MG F 2001
33DC6SOFTWAREGLU F:215 , GLU F:217 , GLU F:286 , GLY F:338 , SER F:339 , GLY F:340 , HIS F:342 , ARG F:398 , GLU F:403 , MG F:1001 , MG F:2001 , ADP F:4001BINDING SITE FOR RESIDUE P3S F 3001
34DC7SOFTWAREGLY F:213 , TRP F:214 , GLU F:215 , GLU F:293 , PRO F:296 , PHE F:298 , ASN F:344 , SER F:346 , ARG F:470 , GLU F:472 , MG F:1001 , P3S F:3001BINDING SITE FOR RESIDUE ADP F 4001
35DC8SOFTWAREASN A:613 , HIS A:614 , LYS F:721 , ARG F:723BINDING SITE FOR RESIDUE CL A 730
36DC9SOFTWAREGLN F:601 , ARG F:605 , ARG F:674 , ASN F:678BINDING SITE FOR RESIDUE CL F 6001

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3O6X)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Thr A:61 -Pro A:62
2Thr B:61 -Pro B:62
3Thr C:61 -Pro C:62
4Thr D:61 -Pro D:62
5Thr E:61 -Pro E:62
6Thr F:61 -Pro F:62

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3O6X)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3O6X)

(-) Exons   (0, 0)

(no "Exon" information available for 3O6X)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh.............hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh..eee.......-----..ee.eee.....eee..hhhhh------------------------.........eee..eee......----....hhhhhhhhhhhhhhhhhhhhhh.......eeeeeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhhh..eeee.......ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeeeeee...............hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.............ee.hhhhhhhhhh.---------------------------------.............eee.......hhhhhhhhhhhhhhhhhhhhhhhh..--------..hhhhhhhhhhhhhh..ee.....hhhhhhhhhhhh.....hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh........hhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x A   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515                                                                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhh............hhhhh....eehhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....eeeee.....-----.eee.eee.....eee..hhhhh------------------------........eee....eeee....----....hhhhhhhhhhhhhhhhhhhhhh..........eeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhh...eeee.......ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhh.---------------------------------.............ee........hhhhhhhhhhhhhhhhhhhhhhhh..--------.hhhhhhhhhhhhhhhhhh......hhhhhhhhhh.......hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x B   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515                                                                                                                                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhh.............hhhhh....eehhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....eeeee.....-----.eee.eee.....eee..hhhhh------------------------........eee....eeee....----....hhhhhhhhhhhhhhhhhhhhhh..........eeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhh...eeee.......ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhh.---------------------------------.............ee........hhhhhhhhhhhhhhhhhhhhhhhh..--------.hhhhhhhhhhhhhhhhhh......hhhhhhhhhh.......hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x C   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515                                                                                                                                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhh.............hhhhh....eehhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....eeeee.....-----.eee.eee.....eee..hhhhh------------------------........eee....eeee....----....hhhhhhhhhhhhhhhhhhhhhh..........eeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhh...eeee.......ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhh.---------------------------------.............ee........hhhhhhhhhhhhhhhhhhhhhhhh..--------.hhhhhhhhhhhhhhhhhh......hhhhhhhhhh.......hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x D   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515                                                                                                                                                                                                                     


Chain E from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhh.............hhhhh....eehhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....eeeee.....-----.eee.eee.....eee..hhhhh------------------------........eee....eeee....----....hhhhhhhhhhhhhhhhhhhhhh..........eeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhh...eeee.......ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhh.---------------------------------.............ee........hhhhhhhhhhhhhhhhhhhhhhhh..--------.hhhhhhhhhhhhhhhhhh......hhhhhhhhhh.......hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x E   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515                                                                                                                                                                                                                     


Chain F from PDB  Type:PROTEIN  Length:638
 aligned with Q5LGP1_BACFN | Q5LGP1 from UniProtKB/TrEMBL  Length:729

    Alignment length:726
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
         Q5LGP1_BACFN     3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDGFIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDRNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEAIFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------------------GSIII_N-3o6xF07 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF01 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------GSIII_N-3o6xF08 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF02 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----------------------GSIII_N-3o6xF09 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF03 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------GSIII_N-3o6xF10 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF04 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------GSIII_N-3o6xF11 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF05 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------GSIII_N-3o6xF12 F:25-186                                                                                                                                          -----Gln-synt_C-3o6xF06 F:192-474                                                                                                                                                                                                                                                               --------------------------------        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
         Sec.struct. author .hhhhhhhhh.............hhhhh....eehhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....eeeee.....-----.eee.eee.....eee..hhhhh------------------------........eee....eeee....----....hhhhhhhhhhhhhhhhhhhhhh..........eeeeee.eeeeehhhhhh..hhhhhh.......--------------.hhhhhhhhhhhhhhhhhh...eee........ee..ee..eehhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeeee..................hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh................hhhhhhhhhh.---------------------------------.............ee........hhhhhhhhhhhhhhhhhhhhhhhh..--------.hhhhhhhhhhhhhhhhhh......hhhhhhhhhh.......hhhhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6x F   3 KMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYLPKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLT-----KHDGFIEFGEDGEVIERFSGKLL------------------------TAWDGSSPAFVVDTTLCIPTIFI----EALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHS--------------IPPRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRLGANEAPPAILSIFLGSQLSATLDEI---------------------------------RNRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK--------DEAIFRILKENIIASELIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIGERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETVRPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFT 728
                                    12        22        32        42        52        62        72        82        92  |    102       112       122|        -         -     | 152       162       | -  |    182       192       202       212       222       232       242|        -     | 262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422 |       -         -         -     | 462       472       482       492       502   |     -  |    522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722      
                                                                                                                       95   101                   123                      148                   170  175                                                                 243            258                                                                                                                                                                   424                               458                                             506      515
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3O6X)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3O6X)

(-) Pfam Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Clan: GCS (23)
(-)
Clan: no clan defined [family: GSIII_N] (1)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q5LGP1_BACFN | Q5LGP1)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0004356    glutamate-ammonia ligase activity    Catalysis of the reaction: L-glutamate + ATP + NH(4)(+) = L-glutamine + ADP + 2 H(+) + phosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ADP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    P3S  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Thr A:61 - Pro A:62   [ RasMol ]  
    Thr B:61 - Pro B:62   [ RasMol ]  
    Thr C:61 - Pro C:62   [ RasMol ]  
    Thr D:61 - Pro D:62   [ RasMol ]  
    Thr E:61 - Pro E:62   [ RasMol ]  
    Thr F:61 - Pro F:62   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3o6x
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q5LGP1_BACFN | Q5LGP1
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q5LGP1_BACFN | Q5LGP1
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3O6X)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3O6X)