No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	FMT	19	Ligand/Ion	FORMIC ACID
3	HEC	2	Ligand/Ion	HEME C
4	MGD	2	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
5	MOS	1	Ligand/Ion	DIOXOTHIOMOLYBDENUM(VI) ION
6	OCS	1	Mod. Amino Acid	CYSTEINESULFONIC ACID
7	SF4	1	Ligand/Ion	IRON/SULFUR CLUSTER

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:19 , PHE A:21 , CYS A:22 , GLY A:25 , CYS A:26 , ASN A:53 , CYS A:54 , GLY A:57 , PRO A:194	BINDING SITE FOR RESIDUE SF4 A 1801
02	AC2	SOFTWARE	CYS A:152 , GLN A:384 , MGD A:1803 , MGD A:1804	BINDING SITE FOR RESIDUE MOS A 1802
03	AC3	SOFTWARE	ARG A:20 , GLN A:123 , ASN A:148 , CYS A:152 , GLN A:350 , GLN A:384 , VAL A:454 , ASN A:455 , ASN A:456 , ASN A:457 , ALA A:460 , SER A:482 , ASP A:483 , ALA A:484 , THR A:487 , SER A:499 , ALA A:500 , MET A:501 , LYS A:505 , ASP A:532 , THR A:692 , ARG A:694 , TRP A:699 , HIS A:700 , SER A:701 , SER A:703 , TRP A:768 , ASN A:776 , PHE A:792 , LYS A:793 , HOH A:820 , HOH A:826 , HOH A:860 , MOS A:1802 , MGD A:1804	BINDING SITE FOR RESIDUE MGD A 1803
04	AC4	SOFTWARE	CYS A:22 , LYS A:56 , CYS A:152 , TRP A:185 , GLY A:186 , ASN A:188 , GLU A:191 , MET A:192 , SER A:216 , THR A:217 , PHE A:218 , HIS A:220 , PHE A:232 , GLN A:235 , ASP A:237 , THR A:345 , MET A:346 , GLY A:347 , PHE A:348 , GLY A:383 , GLN A:384 , GLY A:693 , ARG A:694 , VAL A:695 , LEU A:696 , HIS A:698 , TRP A:699 , HIS A:700 , LYS A:793 , LYS A:794 , HOH A:871 , HOH A:888 , HOH A:894 , HOH A:940 , HOH A:1030 , MOS A:1802 , MGD A:1803	BINDING SITE FOR RESIDUE MGD A 1804
05	AC5	SOFTWARE	PHE A:397 , HIS A:399 , ARG A:400 , HOH A:1090 , HOH A:1200	BINDING SITE FOR RESIDUE FMT A 803
06	AC6	SOFTWARE	LEU A:241 , ASN A:242 , ALA A:245 , MET A:360 , ASN A:363 , LEU A:364	BINDING SITE FOR RESIDUE FMT A 804
07	AC7	SOFTWARE	SER A:15 , LYS A:16 , HIS A:520 , TYR A:587 , FMT A:815 , HOH A:883 , HOH A:1216	BINDING SITE FOR RESIDUE FMT A 805
08	AC8	SOFTWARE	ARG A:150 , HIS A:399 , ILE A:786 , HOH A:1279 , HOH A:1297	BINDING SITE FOR RESIDUE FMT A 806
09	AC9	SOFTWARE	ASP A:167 , GLU A:168 , ARG A:392 , GLU A:393 , ASP A:404 , HIS A:616 , TRP A:632 , HOH A:817	BINDING SITE FOR RESIDUE FMT A 807
10	BC1	SOFTWARE	ARG A:734	BINDING SITE FOR RESIDUE FMT A 809
11	BC2	SOFTWARE	ALA A:627 , ARG A:628 , HOH A:1361	BINDING SITE FOR RESIDUE FMT A 810
12	BC3	SOFTWARE	GLY A:229 , ILE A:230 , ILE A:231 , LYS A:325 , HOH A:1126	BINDING SITE FOR RESIDUE FMT A 811
13	BC4	SOFTWARE	ARG A:203 , HOH A:1322	BINDING SITE FOR RESIDUE FMT A 812
14	BC5	SOFTWARE	ARG A:733 , ARG A:734 , HOH A:1408	BINDING SITE FOR RESIDUE FMT A 813
15	BC6	SOFTWARE	GLY A:527 , GLU A:528 , ALA A:529 , ARG A:530 , HOH A:960	BINDING SITE FOR RESIDUE FMT A 814
16	BC7	SOFTWARE	GLU A:626 , FMT A:805	BINDING SITE FOR RESIDUE FMT A 815
17	BC8	SOFTWARE	SER A:772 , LEU A:774 , LYS A:777 , ARG B:7	BINDING SITE FOR RESIDUE CL A 816
18	BC9	SOFTWARE	PRO B:40 , THR B:41 , ILE B:42 , PRO B:43 , HIS B:44 , ILE B:46 , TYR B:49 , ARG B:57 , CYS B:58 , CYS B:61 , HIS B:62 , ALA B:72 , ILE B:73 , CYS B:98 , HIS B:102 , FMT B:140 , HOH B:355 , HOH B:667	BINDING SITE FOR RESIDUE HEC B 1128
19	CC1	SOFTWARE	ASN A:53 , TYR A:58 , GLN B:38 , PRO B:39 , PRO B:40 , ILE B:73 , VAL B:75 , SER B:76 , THR B:78 , HIS B:79 , ARG B:95 , PHE B:97 , CYS B:98 , CYS B:101 , HIS B:102 , HOH B:162 , HOH B:409 , HOH B:568 , HOH B:667	BINDING SITE FOR RESIDUE HEC B 1129
20	CC2	SOFTWARE	GLY B:48 , TYR B:49 , GLN B:50 , ARG B:57	BINDING SITE FOR RESIDUE FMT B 135
21	CC3	SOFTWARE	LYS A:109 , ARG A:746 , ALA B:13 , ASN B:14 , GLU B:15 , HOH B:144	BINDING SITE FOR RESIDUE FMT B 136
22	CC4	SOFTWARE	GLY B:113 , ASN B:114	BINDING SITE FOR RESIDUE FMT B 137
23	CC5	SOFTWARE	LEU B:2 , VAL B:3 , HOH B:767	BINDING SITE FOR RESIDUE FMT B 138
24	CC6	SOFTWARE	LEU A:491 , VAL B:3 , ASP B:4 , ARG B:7 , GLY B:8 , HOH B:684 , HOH B:710	BINDING SITE FOR RESIDUE FMT B 139
25	CC7	SOFTWARE	HIS B:44 , TYR B:49 , HEC B:1128	BINDING SITE FOR RESIDUE FMT B 140

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	4FE4S_MOW_BIS_MGD	PS51669	Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile.	NAPA_CUPNH	41-97	1	A:12-68
2	MOLYBDOPTERIN_PROK_1	PS00551	Prokaryotic molybdopterin oxidoreductases signature 1.	NAPA_CUPNH	46-64	1	A:17-35
3	MULTIHEME_CYTC	PS51008	Multiheme cytochrome c family profile.	NAPB_CUPNH	88-142	1	B:53-107

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:792
 aligned with NAPA_CUPNH | P39185 from UniProtKB/Swiss-Prot  Length:831

    Alignment length:792
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829  
           NAPA_CUPNH    40 KLKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMYGQDRLTRPLMRMKNGKYDKNGDFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYIIRNNKVNKDFVNKHTVFKEGVTDIGYGLRPDHPLQKAAKNASDPGAAKVITFDEFAKFVSKYDADYVSKLSAVPKAKLDQLAELYADPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHREEAERIWKLPPGTIPDKPGYDAVLQNRMLKDGKLNAYWVQVNNNMQAAANLMEEGLPGYRNPANFIVVSDAYPTVTALAADLVLPSAMWVEKEGAYGNAERRTQFWHQLVDAPGEARSDLWQLVEFAKRFKVEEVWPPELIAKKPEYKGKTLYDVLYRNGQVDKFPLKDVNAEYHNAEAKAFGFYLQKGLFEEYATFGRGHGHDLAPFDAYHEARGLRWPVVNGKETRWRYREGSDPYVKAGTGFQFYGNPDGKAVIFALPYEPPAESPDKEYPYWLVTGRVLEHWHSGSMTRRVPELYRSFPNAVVFMHPEDAKALGLRRGVEVEVVSRRGRMRSRIETRGRDAPPRGLVFVPWFDASQLINKVTLDATCPISLQTDFKKCAVKIVKV 831
               SCOP domains d3o5aa1 A:11-681 automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             d3o5aa2 A:682-802 automated matches                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -Molybdop_Fe4S4-3o5aA02 A:12-66                         --Molybdopterin-3o5aA03 A:69-542                                                                                                                                                                                                                                                                                                                                                                                                                                                            -------------------------------------------------------------------------------------------------------------------------------------------------Molydop_binding-3o5aA01 A:688-796                                                                            ------ Pfam domains
         Sec.struct. author ..eeeeee........eeeeeee..eeeeeee...........hhhhhhhhhh..........eeeee..ee....eeee.hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhh......eee.hhhhhhhhhhhhhhhhh......hhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhh...eeeeee...hhhhhh..eeee....hhhhhhhhhhhhhhhh...hhhhhhhheeeeee...........hhhhhhh........eeeehhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhh....eeeeehhhhhh..hhhhhhhhhhhhhhhhh.......eeee.........hhhhhh.............hhhhhhhhhhhh.............hhhhhhhhhhh....eeeee..hhhhhh.....hhhhhhhh...eeeeee...hhhhhh..eeeeeehhhhh.eeee....eeeee..........eehhhhhhhhhh..hhhhhhhhhhhhhhhhhh..hhhhhhh........hhhhh.....hhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhhhh..ee....................................eeeee...............eeeeee..........hhhhhhhhhhhh...eee.hhhhhhhhh.....eeeee....eeeeeee..........eeeee......hhhhh.................eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -4FE4S_MOW_BIS_MGD  PDB: A:12-68 UniProt: 41-97           -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ------MOLYBDOPTERIN_PROK_----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o5a A  11 KLKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMYGQDRLTRPLMRMKNGKYDKNGDFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYIIRNNKVNKDFVNKHTVFKEGVTDIGYGLRPDHPLQKAAKNASDPGAAKVITFDEFAKFVSKYDADYVSKLSAVPKAKLDQLAELYADPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHREEAERIWKLPPGTIPDKPGYDAVLQNRMLKDGKLNAYWVQVNNNMQAAANLMEEGLPGYRNPANFIVVSDAYPTVTALAADLVLPSAMWVEKEGAYGNAERRTQFWHQLVDAPGEARSDLWQLVEFAKRFKVEEVWPPELIAKKPEYKGKTLYDVLYRNGQVDKFPLKDVNAEYHNAEAKAFGFYLQKGLFEEYATFGRGHGHDLAPFDAYHEARGLRWPVVNGKETRWRYREGSDPYVKAGTGFQFYGNPDGKAVIFALPYEPPAESPDKEYPYWLVTGRVLEHWHSGSMTRRVPELYRSFPNAVVFMHPEDAKALGLRRGVEVEVVSRRGRMRSRIETRGRDAPPRGLVFVPWFDASQLINKVTLDATcPISLQTDFKKCAVKIVKV 802
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780   |   790       800  
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               784-OCS              

Chain B from PDB  Type:PROTEIN  Length:108
 aligned with NAPB_CUPNH | P39186 from UniProtKB/Swiss-Prot  Length:169

    Alignment length:123
                                    45        55        65        75        85        95       105       115       125       135       145       155   
           NAPB_CUPNH    36 GLVDAMRGPTAIANEPRAPLLYPTENKDIRRTRNYTMQPPTIPHKIDGYQLDKDFNRCMFCHARTRTEETQAIPVSITHYMDRDNNVLADVSPRRYFCTQCHVPQADTKPLIGNNFVDVDTIL 158
               SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains NapB-3o5aB01 B:1-119                                                                                                   ---- Pfam domains
         Sec.struct. author ...........................---------..............ee..eehhhhhhh..------....hhhhhh..........hhhhhhhhhh................hhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------MULTIHEME_CYTC  PDB: B:53-107 UniProt: 88-142          ---------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 3o5a B   1 GLVDAMRGPTAIANEPRAPLLYPTENK---------MQPPTIPHKIDGYQLDKDFNRCMFCHART------AIPVSITHYMDRDNNVLADVSPRRYFCTQCHVPQADTKPLIGNNFVDVDTIL 123
                                    10        20      |  -      | 40        50        60    |    - |      80        90       100       110       120   
                                                     27        37                          65     72                                                   

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'