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(-) Description

Title :  THE CRYSTAL STRUCTURE OF THE ACDH DOMAIN OF AN ALCOHOL DEHYDROGENASE FROM VIBRIO PARAHAEMOLYTICUS TO 2.25A
 
Authors :  A. J. Stein, A. Weger, L. Volkart, M. Gu, A. Joachimiak, Midwest Center Structural Genomics (Mcsg)
Date :  10 May 10  (Deposition) - 02 Jun 10  (Release) - 09 Jun 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,D  (1x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Acdh, Psi, Mcsg, Structural Genomics, Midwest Center For Structural Genomics, Protein Structure Initiative, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Stein, A. Weger, L. Volkart, M. Gu, A. Joachimiak
The Crystal Structure Of The Acdh Domain Of An Alcohol Dehydrogenase From Vibrio Parahaemolyticus To 2. 25A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ALCOHOL DEHYDROGENASE/ACETALDEHYDE DEHYDROGENASE
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 1-452
    Gene: VP2121
    Organism Scientific: VIBRIO PARAHAEMOLYTICUS
    Organism Taxid: 223926
    Strain: RIMD 2210633

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A  D
Biological Unit 2 (1x):  BC 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 48)

Asymmetric Unit (2, 48)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
2MSE44Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 22)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE22Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 22)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE22Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS C:65 , ASN C:115 , SER C:118BINDING SITE FOR RESIDUE CL C 453
2AC2SOFTWARESER A:118BINDING SITE FOR RESIDUE CL A 453
3AC3SOFTWARELYS B:65 , ASN B:115 , SER B:118BINDING SITE FOR RESIDUE CL B 453
4AC4SOFTWAREPRO D:116 , THR D:117 , SER D:118BINDING SITE FOR RESIDUE CL D 453

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MY7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3MY7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MY7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MY7)

(-) Exons   (0, 0)

(no "Exon" information available for 3MY7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:411
 aligned with Q87MW0_VIBPA | Q87MW0 from UniProtKB/TrEMBL  Length:900

    Alignment length:448
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441        
         Q87MW0_VIBPA     2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.....eee-------.eeeeee..eeeeee.....hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhh......eee....hhhhhhhhhhh....eeeee.hhhhhhhhhh....eeee--..eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhh..eee.hhhhhhhhhhhhee..ee.hhhh..hhhhhhhhhh........eeeee........hhhhh.....eeeeeee.hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh...eeee.....----------------------------....hhhh.eeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3my7 A   2 PVTNmAELDAmIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGmGIVEDKVIKNHFASEFIYNKYKDEQTCGIL-------TmTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALmKHDDIALILATGGPGmVKAAYSSGKPAIGV--GNVPVVIDETADIKRAVASVLmSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEmAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGmFRADNFEDAVAQAVTmVEIGGIGHTSGLYTNQDVNADRIRYFGDKmKTARILINIPTT----------------------------SENVGPKHLINKKTVAKRA 449
                                |   11|       21        31        41        51       |61        71        81       | -     ||101       111       121       131       141       151       161       171       181|      191      |201       211|  |   221       231    |  241       251       261       271       281       291       301     | 311       321       331       341  |    351       361       371       381       391       401|        -         -       431       441        
                                |     |                                             59-MSE                        89      97|                                                                                 182-MSE         198-MSE       212  |                  236-MSE                                                                307-MSE                              344-MSE         360-MSE                       390-MSE     402                          431                  
                                6-MSE |                                                                                    98-MSE                                                                                                              215                                                                                                                                                                                                                                          
                                     12-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:415
 aligned with Q87MW0_VIBPA | Q87MW0 from UniProtKB/TrEMBL  Length:900

    Alignment length:448
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441        
         Q87MW0_VIBPA     2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh......eeeee....eeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhhhhhh......eee....hhhhhhhhhhh....eeeee.hhhhhhhhh.....eeee--...eeee....hhhhhhhhhhh..hhhhh.......eeeee..hhhhhhhhhhhh.eee.hhhhhhhhhhhhh.--.........hhhhhhhhhh........eeeee..................eeeeeee.hhhhhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhh...eeee......-----------------------------..hhhh.eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3my7 B   2 PVTNmAELDAmIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGmGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTmTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALmKHDDIALILATGGPGmVKAAYSSGKPAIGV--GNVPVVIDETADIKRAVASVLmSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLI--ALNAKIVGQPATAIAEmAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGmFRADNFEDAVAQAVTmVEIGGIGHTSGLYTNQDVNADRIRYFGDKmKTARILINIPTTH-----------------------------NVGPKHLINKKTVAKRA 449
                                |   11|       21        31        41        51       |61        71        81        91      |101       111       121       131       141       151       161       171       181|      191      |201       211|  |   221       231    |  241       251       261       271       281      |291       301     | 311       321       331       341  |    351       361       371       381       391       401 |       -         -         - |     441        
                                6-MSE |                                             59-MSE                                 98-MSE                                                                             182-MSE         198-MSE       212  |                  236-MSE                                             288  |             307-MSE                              344-MSE         360-MSE                       390-MSE      403                           433                
                                     12-MSE                                                                                                                                                                                                    215                                                                         291                                                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:416
 aligned with Q87MW0_VIBPA | Q87MW0 from UniProtKB/TrEMBL  Length:900

    Alignment length:448
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441        
         Q87MW0_VIBPA     2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh......eeeee.--.eeeeeee..eeeeee...hhhhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhh......eee....hhhhhhhhhhh..eeeeeee.hhhhhhhhh.....eeee.....eeee....hhhhhhhhhhh..............eeeee..hhhhhhhhhhhh.eee.hhhhhhhhhhhhh.--..hhhhh..hhhhhhhhhh........eeeee........hhhhh.....eeeeeee.hhhhhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhh...eeee......----------------------------...hhhh.eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3my7 C   2 PVTNmAELDAmIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGmGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDD--GTmTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALmKHDDIALILATGGPGmVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLmSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLI--ALNAKIVGQPATAIAEmAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGmFRADNFEDAVAQAVTmVEIGGIGHTSGLYTNQDVNADRIRYFGDKmKTARILINIPTTH----------------------------ENVGPKHLINKKTVAKRA 449
                                |   11|       21        31        41        51       |61        71        81        91 |  | |101       111       121       131       141       151       161       171       181|      191      |201       211       221       231    |  241       251       261       271       281      |291       301     | 311       321       331       341  |    351       361       371       381       391       401 |       -         -         -|      441        
                                6-MSE |                                             59-MSE                            93 96 |                                                                                 182-MSE         198-MSE                               236-MSE                                             288  |             307-MSE                              344-MSE         360-MSE                       390-MSE      403                          432                 
                                     12-MSE                                                                                98-MSE                                                                                                                                                                                          291                                                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:409
 aligned with Q87MW0_VIBPA | Q87MW0 from UniProtKB/TrEMBL  Length:900

    Alignment length:444
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444    
         Q87MW0_VIBPA     5 NMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) Aldedh-3my7D01 D:5-403                                                                                                                                                                                                                                                                                                                                                                                                                      ---------------- Pfam domains (1)
           Pfam domains (2) Aldedh-3my7D02 D:5-403                                                                                                                                                                                                                                                                                                                                                                                                                      ---------------- Pfam domains (2)
           Pfam domains (3) Aldedh-3my7D03 D:5-403                                                                                                                                                                                                                                                                                                                                                                                                                      ---------------- Pfam domains (3)
           Pfam domains (4) Aldedh-3my7D04 D:5-403                                                                                                                                                                                                                                                                                                                                                                                                                      ---------------- Pfam domains (4)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh......eeeee....eeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhhhhhh......eee....hhhhhhhhhhh..eeeeee.---hhhhhhhh....eee.-...eeeee....hhhhhhhhhhh..hhhhhh....eeeeeeehhhhhhhhhhhhhh.eeeehhhhhhhhhhhhh.--.........hhhhhhh...........eeeee........hhhhh.....eeeeeee.hhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh...eeee......-----------------------------..hhhh.eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3my7 D   5 NmAELDAmIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGmGIVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTmTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALmKHDDIALILAT---GmVKAAYSSGKPAIGV-AGNVPVVIDETADIKRAVASVLmSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLI--ALNAKIVGQPATAIAEmAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGmFRADNFEDAVAQAVTmVEIGGIGHTSGLYTNQDVNADRIRYFGDKmKTARILINIPTTH-----------------------------NVGPKHLINKKTVAKR 448
                             |     |14        24        34        44        54    |   64        74        84        94   |   104       114       124       134       144       154       164       174       184        |-  ||   204       214       224       234 |     244       254       264       274       284   |  |294       304  |    314       324       334       344       354     | 364       374       384     | 394        |-         -         -       434       444    
                             6-MSE |                                             59-MSE                                 98-MSE                                                                             182-MSE    193 197|           212 |                   236-MSE                                             288  |             307-MSE                              344-MSE         360-MSE                       390-MSE      403                           433               
                                  12-MSE                                                                                                                                                                                   198-MSE         214                                                                          291
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3MY7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MY7)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: ALDH-like (49)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q87MW0_VIBPA | Q87MW0)
molecular function
    GO:0008774    acetaldehyde dehydrogenase (acetylating) activity    Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.
    GO:0004022    alcohol dehydrogenase (NAD) activity    Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006066    alcohol metabolic process    The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
    GO:0015976    carbon utilization    A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  3my7
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  Q87MW0_VIBPA | Q87MW0
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    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3MY7)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3MY7)