3M4P - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   ENTAMOEBA HISTOLYTICA ASPARAGINYL-TRNA SYNTHETASE (ASNRS) IN COMPLEX WITH ASPARAGINYL-ADENYLATE

Authors :   E. T. Larson, E. A. Merritt, Medical Structural Genomics Of Pathogenic Protozoa (Msgpp)

Date :   11 Mar 10 (Deposition) - 23 Mar 10 (Release) - 23 Mar 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.83

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Aminoacyl-Trna Synthetase, Trna Ligase, Aars, Asnrs, Translation, Atp-Binding, Nucleotide-Binding, Structural Genomics, Medical Structural Genomics Of Pathogenic Protozoa, Msgpp, Ligase, Protein Biosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. T. Larson, J. E. Kim, A. Napuli, A. Kelley, L. Castaneda, C. L. M. J. Verlinde, W. C. Van Voorhis, F. S. Buckner, E. Fan, W. G. J. Hol, E. A. Merritt
X-Ray Crystal Structure Of Asparaginyl-Trna Synthetase From The Eukaryotic Human Pathogen Entamoeba Histolytica.
To Be Published
PubMed: search

Molecule 1 - ASPARAGINYL-TRNA SYNTHETASE, PUTATIVE
	Chains	:	A, B, C, D
	EC Number	:	6.1.1.22
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	AVA0421
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	159.M00096, EHI_126920
	Organism Scientific	:	ENTAMOEBA HISTOLYTICA
	Organism Taxid	:	5759
	Synonym	:	EHASNRS

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 18)

No.	Name	Count	Type	Full Name
1	4AD	4	Ligand/Ion	4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE
2	GOL	2	Ligand/Ion	GLYCEROL
3	SO4	12	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 9)

No.	Name	Count	Type	Full Name
1	4AD	2	Ligand/Ion	4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE
2	GOL	1	Ligand/Ion	GLYCEROL
3	SO4	6	Ligand/Ion	SULFATE ION

Biological Unit 2 (3, 9)

No.	Name	Count	Type	Full Name
1	4AD	2	Ligand/Ion	4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE
2	GOL	1	Ligand/Ion	GLYCEROL
3	SO4	6	Ligand/Ion	SULFATE ION

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	SER A:204 , GLN A:206 , ARG A:227 , GLU A:229 , ARG A:235 , HIS A:236 , LEU A:237 , TYR A:240 , HIS A:242 , GLU A:244 , TYR A:351 , GLU A:374 , ILE A:375 , VAL A:376 , GLY A:377 , ARG A:381 , TYR A:419 , GLY A:420 , GLY A:422 , ARG A:425	BINDING SITE FOR RESIDUE 4AD A 500
02	AC2	SOFTWARE	PRO A:132 , MET A:135 , ARG A:232 , TYR A:445 , ARG A:448	BINDING SITE FOR RESIDUE SO4 A 511
03	AC3	SOFTWARE	ILE A:131 , LYS A:134 , ARG A:437 , LYS A:438	BINDING SITE FOR RESIDUE SO4 A 512
04	AC4	SOFTWARE	TYR A:35 , SER A:144 , GLU A:145 , HIS A:146	BINDING SITE FOR RESIDUE SO4 A 513
05	AC5	SOFTWARE	ARG A:154 , GLU A:239 , TYR A:240 , LEU A:241 , GLU A:424 , CYS A:440 , LEU A:441 , GLN B:174	BINDING SITE FOR RESIDUE GOL A 521
06	AC6	SOFTWARE	SER B:204 , GLN B:206 , ARG B:227 , ARG B:235 , HIS B:236 , LEU B:237 , TYR B:240 , HIS B:242 , GLU B:244 , TYR B:351 , GLU B:374 , ILE B:375 , GLY B:377 , ARG B:381 , TYR B:419 , GLY B:420 , GLY B:422 , ARG B:425	BINDING SITE FOR RESIDUE 4AD B 500
07	AC7	SOFTWARE	ILE B:131 , PRO B:132 , MET B:135 , TYR B:445 , ARG B:448	BINDING SITE FOR RESIDUE SO4 B 511
08	AC8	SOFTWARE	LYS B:134 , ARG B:437 , LYS B:438	BINDING SITE FOR RESIDUE SO4 B 512
09	AC9	SOFTWARE	TYR B:35 , SER B:144 , GLU B:145 , HIS B:146	BINDING SITE FOR RESIDUE SO4 B 513
10	BC1	SOFTWARE	SER C:204 , GLN C:206 , ARG C:227 , GLU C:229 , ARG C:235 , HIS C:236 , LEU C:237 , TYR C:240 , HIS C:242 , GLU C:244 , GLU C:374 , ILE C:375 , VAL C:376 , GLY C:377 , ARG C:381 , TYR C:419 , GLY C:420 , GLY C:422 , ARG C:425 , ILE C:436	BINDING SITE FOR RESIDUE 4AD C 500
11	BC2	SOFTWARE	PRO C:132 , MET C:135 , TYR C:445 , GLU C:447 , ARG C:448	BINDING SITE FOR RESIDUE SO4 C 511
12	BC3	SOFTWARE	LYS C:134 , ARG C:437 , LYS C:438	BINDING SITE FOR RESIDUE SO4 C 512
13	BC4	SOFTWARE	TYR C:35 , SER C:144 , GLU C:145 , HIS C:146	BINDING SITE FOR RESIDUE SO4 C 513
14	BC5	SOFTWARE	SER D:204 , GLN D:206 , ARG D:227 , ARG D:235 , HIS D:236 , LEU D:237 , TYR D:240 , HIS D:242 , GLU D:244 , TYR D:351 , GLU D:374 , ILE D:375 , ARG D:381 , TYR D:419 , GLY D:420 , LEU D:421 , GLY D:422 , ARG D:425	BINDING SITE FOR RESIDUE 4AD D 500
15	BC6	SOFTWARE	HIS B:358 , PRO D:132 , MET D:135 , ARG D:232 , TYR D:445 , ARG D:448	BINDING SITE FOR RESIDUE SO4 D 511
16	BC7	SOFTWARE	LYS D:134 , ARG D:437 , LYS D:438	BINDING SITE FOR RESIDUE SO4 D 512
17	BC8	SOFTWARE	TYR D:35 , SER D:144 , GLU D:145 , HIS D:146	BINDING SITE FOR RESIDUE SO4 D 513
18	BC9	SOFTWARE	GLN C:174 , ARG D:154 , GLU D:239 , GLU D:424 , TYR D:442	BINDING SITE FOR RESIDUE GOL D 521

(no "SS Bond" information available for 3M4P)

Asymmetric Unit

No.	Residues
1	Arg A:290	-	Pro A:291
2	Glu A:450	-	Pro A:451
3	Arg B:290	-	Pro B:291
4	Glu B:450	-	Pro B:451
5	Arg C:290	-	Pro C:291
6	Glu C:450	-	Pro C:451
7	Arg D:290	-	Pro D:291
8	Glu D:450	-	Pro D:451

(no "SAP(SNP)/Variant" information available for 3M4P)

(no "PROSITE Motif" information available for 3M4P)

(no "Exon" information available for 3M4P)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:435
 aligned with C4LWW8_ENTHI | C4LWW8 from UniProtKB/TrEMBL  Length:451

    Alignment length:441
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
         C4LWW8_ENTHI    11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee..........eeeeeeeeeeee.....eeeeeee....eeeeeee.....hhhhhh......eeeeeeeee.................eeeeeeeeeee..hhhhh.......hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee.------....eeee..eeeee...hhhhhhhhhhhhh.eeeeeeee............eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeehhhhhhhhhhhh..............hhhhhhhhhhhhh..eeee..hhhhh.....ee..eeeee.eeeeee...eeeeeeee...hhhhhhhhhhh....hhhhhhhhhhhh.....eeeeeeehhhhhhhhhh..hhhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m4p A  11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVK------STLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      |190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
                                                                                                                                                                                                   180    187

Chain B from PDB  Type:PROTEIN  Length:435
 aligned with C4LWW8_ENTHI | C4LWW8 from UniProtKB/TrEMBL  Length:451

    Alignment length:441
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
         C4LWW8_ENTHI    11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee..........eeeeeeeeeeeeeee..eeeeeee....eeeeeee.....hhhhhh......eeeeeeeee.............eeeeeeeeeeeeeee....hhhhhh....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee..------...eeee..eeeee...hhhhhhhhhhhhh.eeeeeeee............eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeehhhhhhhhhhh...............hhhhhhhhhhhhh..eeee..hhhhh.....ee..eeeee.eeeeee...eeeeeeeee..hhhhhhhhhhhh...hhhhhhhhhhhhh....eeeeeeehhhhhhhhh...hhhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m4p B  11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKT------TLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180|      190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
                                                                                                                                                                                                    181    188

Chain C from PDB  Type:PROTEIN  Length:429
 aligned with C4LWW8_ENTHI | C4LWW8 from UniProtKB/TrEMBL  Length:451

    Alignment length:441
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
         C4LWW8_ENTHI    11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee..........eeeeeeeeeeeeeee..eeeeeee....eeeeeee.....hhhhhh......eeeeeeeee.................eeeeeeeeeee..hhhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee.-------...eeee..eeeee...hhhhhhhhhhhhh.eeeeeeee............eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeehhhhhhhhhhh-----..........hhhhhhhhhhhhh..eeee..hhhhh.....ee..eeeee.eeeeee...eeeeeeeee..hhhhhhhhhhhh...hhhhhhhhhhhhh....eeeeeeehhhhhhhhhh..hhhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m4p C  11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVK-------TLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDH-----DKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      |  -  |    320       330       340       350       360       370       380       390       400       410       420       430       440       450 
                                                                                                                                                                                                   180     188                                                                                                                    307   313

Chain D from PDB  Type:PROTEIN  Length:435
 aligned with C4LWW8_ENTHI | C4LWW8 from UniProtKB/TrEMBL  Length:451

    Alignment length:441
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
         C4LWW8_ENTHI    11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----------------tRNA_anti-3m4pD01 D:28-114                                                             ---------------tRNA-synt_2-3m4pD05 D:130-446                                                                                                                                                                                                                                                                                                ----- Pfam domains (1)
           Pfam domains (2) -----------------tRNA_anti-3m4pD02 D:28-114                                                             ---------------tRNA-synt_2-3m4pD06 D:130-446                                                                                                                                                                                                                                                                                                ----- Pfam domains (2)
           Pfam domains (3) -----------------tRNA_anti-3m4pD03 D:28-114                                                             ---------------tRNA-synt_2-3m4pD07 D:130-446                                                                                                                                                                                                                                                                                                ----- Pfam domains (3)
           Pfam domains (4) -----------------tRNA_anti-3m4pD04 D:28-114                                                             ---------------tRNA-synt_2-3m4pD08 D:130-446                                                                                                                                                                                                                                                                                                ----- Pfam domains (4)
         Sec.struct. author ....ee..........eeeeeeeeeeeeeee..eeeeeee....eeeeeee.hhhhhhhhhh......eeeeeeeeee...............eeeeeeeeeeee....hhhhhh....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee..------...eeee..eeeee...hhhhhhhhhhhhh.eeeeeeee............eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeehhhhhhhhhhh...............hhhhhhhhhhhhh..eeee..hhhhh.....ee..eeeee.eeeeee...eeeeeeee...hhhhhhhhhhhh...hhhhhhhhhhhhh....eeeeeeehhhhhhhhhh..hhhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m4p D  11 TPIVCNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLNAYAGKNHPPEIADILNLEMQVTEWKVIGESPIDLENIINKDSSIPQKMQNRHIVIRSEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKT------TLFKLQYFNEPAYLTQSSQLYLESVIASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIGCPIFMIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCEP 451
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180|      190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
                                                                                                                                                                                                    181    188

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3M4P)

(no "CATH Domain" information available for 3M4P)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: OB (224)

Family: tRNA_anti (18)

Entamoeba histolytica (2)

1a	tRNA_anti-3m4pD01	D:28-114
1b	tRNA_anti-3m4pD02	D:28-114
1c	tRNA_anti-3m4pD03	D:28-114
1d	tRNA_anti-3m4pD04	D:28-114

Clan: tRNA_synt_II (64)

Family: tRNA-synt_2 (8)

Entamoeba histolytica (2)

2a	tRNA-synt_2-3m4pD05	D:130-446
2b	tRNA-synt_2-3m4pD06	D:130-446
2c	tRNA-synt_2-3m4pD07	D:130-446
2d	tRNA-synt_2-3m4pD08	D:130-446

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (C4LWW8_ENTHI | C4LWW8)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004812	aminoacyl-tRNA ligase activity	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
	GO:0004816	asparagine-tRNA ligase activity	Catalysis of the reaction: L-asparagine + ATP + tRNA(Asn) = AMP + Asn-tRNA(Asn) + diphosphate + 2 H(+).
	GO:0016874	ligase activity	Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
	GO:0003676	nucleic acid binding	Interacting selectively and non-covalently with any nucleic acid.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006421	asparaginyl-tRNA aminoacylation	The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
	GO:0006418	tRNA aminoacylation for protein translation	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
	GO:0006412	translation	The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		4AD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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	Sites
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	Cis Peptide Bonds
		Arg A:290 - Pro A:291	[ RasMol ]
		Arg B:290 - Pro B:291	[ RasMol ]
		Arg C:290 - Pro C:291	[ RasMol ]
		Arg D:290 - Pro D:291	[ RasMol ]
		Glu A:450 - Pro A:451	[ RasMol ]
		Glu B:450 - Pro B:451	[ RasMol ]
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		Glu D:450 - Pro D:451	[ RasMol ]

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Jmol
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Molscript
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Access by PDB/NDB ID
	3m4p
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	C4LWW8_ENTHI \| C4LWW8
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	6.1.1.22
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	C4LWW8_ENTHI \| C4LWW8
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UniProtKB/TrEMBL
	C4LWW8_ENTHI \| C4LWW8	:	3m4q

3m4q	APO FORM OF SAME PROTEIN

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 18)

Sites (18, 18)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (2, 8)

Gene Ontology (10, 10)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File