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(-) Description

Title :  THE CRYSTAL STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE 4-EPIMERASE FROM BACILLUS CEREUS
 
Authors :  Z. Zhang, S. K. Burley, S. Swaminathan, New York Sgx Research Center For Structural Genomics (Nysgxrc)
Date :  08 Mar 10  (Deposition) - 07 Apr 10  (Release) - 07 Apr 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.95
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,F  (1x)
Biol. Unit 3:  D,E  (1x)
Keywords :  Sgxny, 11155J, Udp, Isomerase, Structural Genomics, Psi-2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. Zhang, S. K. Burley, S. Swaminathan
The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UDP-N-ACETYLGLUCOSAMINE 4-EPIMERASE
    Chains: A, B, C, D, E, F
    EC Number: 5.1.3.7
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BC-PSGX3(BC)
    Expression System Strain: BL21(DE3) CODON+RIL STRATAGENE
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BC_5271
    Organism Scientific: BACILLUS CEREUS
    Organism Taxid: 226900
    Strain: ATCC 14579 / DSM 31

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   C  F
Biological Unit 3 (1x):    DE 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 25)

Asymmetric Unit (2, 25)
No.NameCountTypeFull Name
1MSE24Mod. Amino AcidSELENOMETHIONINE
2UDP1Ligand/IonURIDINE-5'-DIPHOSPHATE
Biological Unit 1 (2, 9)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
2UDP1Ligand/IonURIDINE-5'-DIPHOSPHATE
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
2UDP-1Ligand/IonURIDINE-5'-DIPHOSPHATE
Biological Unit 3 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
2UDP-1Ligand/IonURIDINE-5'-DIPHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY B:7 , THR B:9 , GLY B:10 , PHE B:11 , LEU B:12 , ARG B:32 , ALA B:69 , THR B:70 , HOH B:321BINDING SITE FOR RESIDUE UDP B 7517

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3M2P)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Leu A:117 -Pro A:118
2Gly A:225 -Asp A:226
3Leu B:117 -Pro B:118
4Leu C:117 -Pro C:118
5Leu D:117 -Pro D:118
6Gly D:293 -Leu D:294
7Leu E:117 -Pro E:118
8Leu F:117 -Pro F:118

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3M2P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3M2P)

(-) Exons   (0, 0)

(no "Exon" information available for 3M2P)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:287
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                             1                                                                                                                                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 293
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh..eeeeee....-----..eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhh.hhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeeeee.eee....--.hhhhhhhhhhhh...eee.......eeeeehhhhhhhhhhhh......eeeee....eehhhhhhhhhhhhh.....eee...............hhhhhhhh......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3m2p A   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-----DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE--NYmINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRG 293
                                     9        19        29     |   - |      49        59        69        79        89        99       109       119       129|      139       149       159      |169 |     179       189       199       209       219       229       239       249       259   |   269       279       289 |  
                                                              35    41                                                                                      130-MSE                             166  | |                                                                                         263-MSE                     291-MSE
                                                                                                                                                                                                   169 |                                                                                                                          
                                                                                                                                                                                                     171-MSE                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:255
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                             1                                                                                                                                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 293
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh..eeeeee....------.eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhh.hhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeeeee.eee....--.hhhhhh-----------------.eeeeeehhhhhhhhhhhhhh....eeeee....eeehhhhhhhhhhhhh.--------------.......hhhhhhhh......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3m2p B   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG------YEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE--NYmINRF-----------------AKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGN--------------IHSSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRG 293
                                     9        19        29     |   -  |     49        59        69        79        89        99       109       119       129|      139       149       159      |169 |   |   -         -   |   199       209       219       229       239   |     -       259   |   269       279       289 |  
                                                              35     42                                                                                     130-MSE                             166  | | 175               193                                               243            258    |                         291-MSE
                                                                                                                                                                                                   169 |                                                                                         263-MSE                          
                                                                                                                                                                                                     171-MSE                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:280
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                             1                                                                                                                                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 293
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhh...eeeeee.....----..eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhh.hhhhh...........hhhhhhhhhhhhhhhhhhhhh..eeeeeee.eee....--.hhhhhhhhhhhhh..ee........eeeeehhhhhhhhhhhhhh....eeeee....eehhhhhhhhhhhhh.....ee.--------.......hhhhhhhhh.....hhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3m2p C   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN----DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE--NYmINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLV--------IHSSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRG 293
                                     9        19        29      |  - |      49        59        69        79        89        99       109       119       129|      139       149       159      |169 |     179       189       199       209       219       229       239       249       259   |   269       279       289 |  
                                                               36   41                                                                                      130-MSE                             166  | |                                                                           249      258    |                         291-MSE
                                                                                                                                                                                                   169 |                                                                                         263-MSE                          
                                                                                                                                                                                                     171-MSE                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:289
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:302
                             1                                                                                                                                                                                                                                                                                                            
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299  
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVPLWY 301
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh..eeeeee....-----..eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhh.................hhhhhhhhhhhhhhhhhhhhh..eeeeeee.eee.......hhhhhhhhhhhh...eee.......eeeeehhhhhhhhhhhhhh....eeeee....eehhhhhhhhhhhhh.....eee..--------.....hhhhhhhh......hhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m2p D   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-----DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYmINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKN--------SSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRGLDDVPLWY 303
                                     9        19        29     |   - |      49        59        69        79        89        99       109       119       129|      139       149       159       169 |     179       189       199       209       219       229       239       249 |       -|  |   269       279       289 |     301  
                                                              35    41                                                                                      130-MSE                                  171-MSE                                                                         251      260  |                         291-MSE298|  
                                                                                                                                                                                                                                                                                                 263-MSE                             301  


Chain E from PDB  Type:PROTEIN  Length:262
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                             1                                                                                                                                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 293
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhh...eeeeee....------.eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhh.................hhhhhhhhhhhhhhhhhhhhhh.eeeeeee.eee.......hhhhhhhhhhh.-----------..eeeeehhhhhhhhhhhh......eeeee....eehhhhhhhhhhhhhh---------------.......hhhhhhhh......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3m2p E   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG------YEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYmINRFFRQAFH-----------AKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFG---------------IHSSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRG 293
                                     9        19        29     |   -  |     49        59        69        79        89        99       109       119       129|      139       149       159       169 |     179 |       -   |   199       209       219       229       239  |      -       259   |   269       279       289 |  
                                                              35     42                                                                                     130-MSE                                  171-MSE   181         193                                              242             258    |                         291-MSE
                                                                                                                                                                                                                                                                                                 263-MSE                          


Chain F from PDB  Type:PROTEIN  Length:267
 aligned with Q814Z6_BACCR | Q814Z6 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                             1                                                                                                                                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
         Q814Z6_BACCR     - -MKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 293
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ---Epimerase-3m2pF01 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (1)
           Pfam domains (2) ---Epimerase-3m2pF02 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (2)
           Pfam domains (3) ---Epimerase-3m2pF03 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (3)
           Pfam domains (4) ---Epimerase-3m2pF04 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (4)
           Pfam domains (5) ---Epimerase-3m2pF05 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (5)
           Pfam domains (6) ---Epimerase-3m2pF06 F:3-223                                                                                                                                                                                                    ---------------------           -------------------------------------- Pfam domains (6)
         Sec.struct. author ..eeeee...hhhhhhhhhhhhh...eeeeee....-----..eeee...hhhhhhhhh....eeee.........hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhh.hhhhh...........hhhhhhhhhhhhhhhhhhhhhh.eeeeeee.eee......hhhhhhhhhhh-----------....eeeeehhhhhhhhhhhhhh....eeeee....eehhhhhhhhhhh.....-----------.........hhhhhhhh......hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3m2p F   0 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-----DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLmYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYmINRFFRQA-----------SVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNK-----------EGIHSSYmDSSKAKELLDFSTDYNFATAVEEIHLLmRG 293
                                     9        19        29     |   - |      49        59        69        79        89        99       109       119       129|      139       149       159       169 |     179         - |     199       209       219       229       239    |    -      |259   |   269       279       289 |  
                                                              35    41                                                                                      130-MSE                                  171-MSE 179         191                                                  244         256      |                         291-MSE
                                                                                                                                                                                                                                                                                                 263-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3M2P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3M2P)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: NADP_Rossmann (1239)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q814Z6_BACCR | Q814Z6)
molecular function
    GO:0003974    UDP-N-acetylglucosamine 4-epimerase activity    Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0050662    coenzyme binding    Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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  3m2p
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    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
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  Q814Z6_BACCR | Q814Z6
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  5.1.3.7
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    Interatomic Contacts of Structural Units: CSU
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  Q814Z6_BACCR | Q814Z6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3M2P)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3M2P)