Chain A from PDB Type:PROTEIN Length:146
aligned with Y014_METJA | Q60329 from UniProtKB/Swiss-Prot Length:213
Alignment length:146
70 80 90 100 110 120 130 140 150 160 170 180 190 200
Y014_METJA 61 QRKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKMVMNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGMHSHKYKKLTKTVKEIVRE 206
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeee.hhhhhhhhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhh..eeeeee.hhhhhh..hhhhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RECOMBINASES_3 PDB: A:63-206 UniProt: 63-213 PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3lhk A 61 NAKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKmVmNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGmHSHKYKKLTKTVKEIVRE 206
70 80 90 100 110 120 | 130 140 150 160 170 180 190 200
120-MSE 188-MSE
122-MSE
Chain B from PDB Type:PROTEIN Length:145
aligned with Y014_METJA | Q60329 from UniProtKB/Swiss-Prot Length:213
Alignment length:145
71 81 91 101 111 121 131 141 151 161 171 181 191 201
Y014_METJA 62 RKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKMVMNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGMHSHKYKKLTKTVKEIVRE 206
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeee.hhhhhhhhhhhhhhhhhhhhhh...eeeeeee.......hhhhhhhhhhhhh....eeee.hhhhh...hhhhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -RECOMBINASES_3 PDB: B:63-206 UniProt: 63-213 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3lhk B 62 AKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKmVmNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGmHSHKYKKLTKTVKEIVRE 206
71 81 91 101 111 121| 131 141 151 161 171 181 |191 201
120-MSE 188-MSE
122-MSE
Chain C from PDB Type:PROTEIN Length:145
aligned with Y014_METJA | Q60329 from UniProtKB/Swiss-Prot Length:213
Alignment length:145
70 80 90 100 110 120 130 140 150 160 170 180 190 200
Y014_METJA 61 QRKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKMVMNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGMHSHKYKKLTKTVKEIVR 205
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhh..eeeeee.hhhhh...hhhhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RECOMBINASES_3 PDB: C:63-205 UniProt: 63-213 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3lhk C 61 NAKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKmVmNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGmHSHKYKKLTKTVKEIVR 205
70 80 90 100 110 120 | 130 140 150 160 170 180 190 200
120-MSE 188-MSE
122-MSE
Chain D from PDB Type:PROTEIN Length:145
aligned with Y014_METJA | Q60329 from UniProtKB/Swiss-Prot Length:213
Alignment length:145
71 81 91 101 111 121 131 141 151 161 171 181 191 201
Y014_METJA 62 RKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKMVMNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGMHSHKYKKLTKTVKEIVRE 206
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) --Resolvase-3lhkD01 D:64-202 ---- Pfam domains (1)
Pfam domains (2) --Resolvase-3lhkD02 D:64-202 ---- Pfam domains (2)
Pfam domains (3) --Resolvase-3lhkD03 D:64-202 ---- Pfam domains (3)
Pfam domains (4) --Resolvase-3lhkD04 D:64-202 ---- Pfam domains (4)
Sec.struct. author .eeeeeeee.hhhhhhhhhhhhhhhhhhhhhh....eeeeee.......hhhhhhhhhhhhh..eeeeee.hhhhhh..hhhhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -RECOMBINASES_3 PDB: D:63-206 UniProt: 63-213 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3lhk D 62 AKIIGYARVSFNAQKDDLERQIQLIKSYAEENGWDIQILKDIGSGLNEKRKNYKKLLKmVmNRKVEKVIIAYPDRLTRFGFETLKEFFKSYGTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYGmHSHKYKKLTKTVKEIVRE 206
71 81 91 101 111 121| 131 141 151 161 171 181 |191 201
120-MSE 188-MSE
122-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |