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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE CA/CALMODULIN-DEPENDENT KINASE II ASSOCIATION DOMAIN (EXIG_1688) FROM EXIGUOBACTERIUM SIBIRICUM 255-15 AT 2.59 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  23 Nov 09  (Deposition) - 29 Dec 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Cystatin-Like Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Calcium/Calmodulin-Dependent Kinase Ii Association Domain (Yp_001814158. 1) From Exiguobacterium Sp 255-15 At 2. 59 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CALCIUM/CALMODULIN-DEPENDENT KINASE II ASSOCIATION DOMAIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: EXIG_1688
    Organism Scientific: EXIGUOBACTERIUM SIBIRICUM 255-15
    Organism Taxid: 262543
    Strain: DSM 17290 / JCM 13490 / 255-15

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL
2MSE5Mod. Amino AcidSELENOMETHIONINE
3NHE1Ligand/Ion2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
Biological Unit 1 (3, 14)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2MSE10Mod. Amino AcidSELENOMETHIONINE
3NHE2Ligand/Ion2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:0 , MSE A:1 , ASP A:41 , GLY A:42 , GLN A:43 , TYR A:56 , TYR A:93 , PHE A:102BINDING SITE FOR RESIDUE NHE A 129
2AC2SOFTWARETYR A:52 , GLN A:67 , ASP A:89BINDING SITE FOR RESIDUE EDO A 130

(-) SS Bonds  (0, 0)

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:129
 aligned with B1YH80_EXIS2 | B1YH80 from UniProtKB/TrEMBL  Length:128

    Alignment length:129
                             1                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119         
         B1YH80_EXIS2     - -MEPSAKHLQLQTLLSERHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQIQWSNQISESMVVEVFETTALVQEIVEDHFSYGRSMYIGRFRSVSLYHWANEGWKWHFHQLTPLDPS 128
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------SnoaL_3-3kspA01 A:10-127                                                                                              - Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeeee.....eehhhhhhhhhh....eeeeeeeeeeeeeee...eeeeeeeeeeeeee..eeeeeeeeeeeeeeee..eeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksp A   0 GmEPSAKHLQLQTLLSERHAYLmEGNREAmHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQIQWSNQISESmVVEVFETTALVQEIVEDHFSYGRSmYIGRFRSVSLYHWANEGWKWHFHQLTPLDPS 128
                             |       9        19  |     29        39        49        59        69  |     79        89       |99       109       119         
                             |                   22-MSE 29-MSE                                     72-MSE                   97-MSE                           
                             1-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3KSP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3KSP)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: NTF2 (66)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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