Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF THE PHOSPHORYLATION-SITE MUTANT T426N OF THE KAIC CIRCADIAN CLOCK PROTEIN
 
Authors :  R. Pattanayek, M. Egli, S. Pattanayek
Date :  24 Sep 09  (Deposition) - 31 Mar 10  (Release) - 31 Mar 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.20
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Kaic, Circadian Clock Protein, Kinase, Hexamer, Atp-Binding, Biological Rhythms, Dna-Binding, Magnesium, Metal-Binding, Nucleotide-Binding, Phosphoprotein, Repressor, Serine/Threonine-Protein Kinase, Transcription, Transcription Regulation, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Pattanayek, T. Mori, Y. Xu, S. Pattanayek, C. H. Johnson, M. Egli
Structures Of Kaic Circadian Clock Mutant Proteins: A New Phosphorylation Site At T426 And Mechanisms Of Kinase, Atpase And Phosphatase.
Plos One V. 4 E7529 2009
PubMed-ID: 19956664  |  Reference-DOI: 10.1371/JOURNAL.PONE.0007529

(-) Compounds

Molecule 1 - CIRCADIAN CLOCK PROTEIN KINASE KAIC
    Chains: A, B, C, D, E, F
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3
    Expression System Strain: B121(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: KAIC, SEE0011, SYNPCC7942_1216
    Mutation: YES
    Organism Common: ANACYSTIS NIDULANS R2
    Organism Scientific: SYNECHOCOCCUS ELONGATUS PCC 7942
    Organism Taxid: 1140
    Strain: PCC7942

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 44)

Asymmetric/Biological Unit (4, 44)
No.NameCountTypeFull Name
1ATP12Ligand/IonADENOSINE-5'-TRIPHOSPHATE
2MG20Ligand/IonMAGNESIUM ION
3SEP6Mod. Amino AcidPHOSPHOSERINE
4TPO6Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (32, 32)

Asymmetric Unit (32, 32)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:295 , GLU A:318 , GLU A:319 , ASP A:378 , MG A:802 , ATP A:901BINDING SITE FOR RESIDUE MG A 801
02AC2SOFTWAREMG A:801 , ATP A:901BINDING SITE FOR RESIDUE MG A 802
03AC3SOFTWARETHR A:53 , GLU A:77 , ATP A:903BINDING SITE FOR RESIDUE MG A 701
04AC4SOFTWARETHR A:290 , GLY A:291 , THR A:292 , GLY A:293 , LYS A:294 , THR A:295 , LEU A:296 , GLU A:318 , GLU A:319 , TRP A:331 , ARG A:451 , ILE A:472 , SER A:473 , MG A:801 , MG A:802 , LYS B:457 , MET B:458 , ARG B:459 , GLY B:460 , SER B:461 , TRP B:462 , HIS B:463BINDING SITE FOR RESIDUE ATP A 901
05AC5SOFTWAREGLY A:49 , THR A:50 , GLY A:51 , LYS A:52 , THR A:53 , LEU A:54 , GLU A:77 , GLU A:78 , SER A:89 , PHE A:90 , ARG A:218 , ILE A:239 , THR A:240 , ASP A:241 , HOH A:526 , MG A:701 , LEU B:223 , LYS B:224 , LEU B:225 , ARG B:226 , THR B:228 , SER B:229 , HIS B:230 , LYS B:232 , MG B:702BINDING SITE FOR RESIDUE ATP A 903
06AC6SOFTWARELYS A:224 , SER F:48 , ATP F:903BINDING SITE FOR RESIDUE MG A 702
07AC7SOFTWARESER A:48 , ATP A:903 , PHE B:199 , LYS B:224BINDING SITE FOR RESIDUE MG B 702
08AC8SOFTWAREGLU B:318 , HOH B:522 , MG B:801 , ATP B:901BINDING SITE FOR RESIDUE MG B 802
09AC9SOFTWARETHR B:295 , GLU B:318 , GLU B:319 , HOH B:522 , MG B:802 , ATP B:901 , ARG C:459BINDING SITE FOR RESIDUE MG B 801
10BC1SOFTWARETHR B:53 , ASP B:145 , ATP B:903BINDING SITE FOR RESIDUE MG B 701
11BC2SOFTWARETHR B:290 , GLY B:291 , THR B:292 , GLY B:293 , LYS B:294 , THR B:295 , TRP B:331 , ARG B:451 , ILE B:472 , ASP B:474 , HOH B:522 , MG B:801 , MG B:802 , LYS C:457 , MET C:458 , ARG C:459 , SER C:461 , TRP C:462 , HIS C:463BINDING SITE FOR RESIDUE ATP B 901
12BC3SOFTWAREGLY B:49 , THR B:50 , GLY B:51 , LYS B:52 , THR B:53 , LEU B:54 , GLU B:78 , SER B:89 , PHE B:90 , ILE B:239 , THR B:240 , MG B:701 , LYS C:224 , LEU C:225 , ARG C:226 , THR C:228 , SER C:229 , HIS C:230 , LYS C:232BINDING SITE FOR RESIDUE ATP B 903
13BC4SOFTWARETHR C:295 , GLU C:318 , MG C:802 , ATP C:901 , ARG D:459BINDING SITE FOR RESIDUE MG C 801
14BC5SOFTWARETHR C:290 , MG C:801 , ATP C:901BINDING SITE FOR RESIDUE MG C 802
15BC6SOFTWARETHR C:53 , GLU C:78 , ATP C:903 , ARG D:226BINDING SITE FOR RESIDUE MG C 702
16BC7SOFTWARETHR C:290 , GLY C:291 , THR C:292 , GLY C:293 , LYS C:294 , THR C:295 , SER C:330 , TRP C:331 , ARG C:451 , ILE C:472 , MG C:801 , MG C:802 , LYS D:457 , MET D:458 , ARG D:459 , SER D:461 , HIS D:463 , LYS D:465BINDING SITE FOR RESIDUE ATP C 901
17BC8SOFTWARESER C:48 , GLY C:49 , THR C:50 , GLY C:51 , LYS C:52 , THR C:53 , LEU C:54 , SER C:89 , PHE C:90 , ILE C:239 , THR C:240 , ASP C:241 , MG C:701 , MG C:702 , PHE D:199 , LYS D:224 , LEU D:225 , THR D:228 , HIS D:230 , LYS D:232BINDING SITE FOR RESIDUE ATP C 903
18BC9SOFTWARETHR C:53 , ASP C:145 , ATP C:903BINDING SITE FOR RESIDUE MG C 701
19CC1SOFTWARETHR D:295 , GLU D:319 , MG D:801 , ATP D:901 , ARG E:459BINDING SITE FOR RESIDUE MG D 802
20CC2SOFTWARELYS D:294 , MG D:802 , ATP D:901BINDING SITE FOR RESIDUE MG D 801
21CC3SOFTWARETHR D:53 , GLU D:78 , ATP D:903BINDING SITE FOR RESIDUE MG D 520
22CC4SOFTWARETHR D:290 , GLY D:291 , THR D:292 , GLY D:293 , LYS D:294 , THR D:295 , LEU D:296 , GLU D:318 , TRP D:331 , ARG D:451 , ILE D:472 , SER D:473 , HOH D:537 , MG D:801 , MG D:802 , LYS E:457 , MET E:458 , ARG E:459 , GLY E:460 , SER E:461 , HIS E:463BINDING SITE FOR RESIDUE ATP D 901
23CC5SOFTWARESER D:48 , GLY D:49 , THR D:50 , GLY D:51 , LYS D:52 , THR D:53 , LEU D:54 , SER D:89 , PHE D:90 , ILE D:239 , ASP D:241 , MG D:520 , LYS E:224 , ARG E:226 , GLY E:227 , THR E:228 , HIS E:230 , LYS E:232BINDING SITE FOR RESIDUE ATP D 903
24CC6SOFTWARETHR E:295 , GLU E:318 , ATP E:901BINDING SITE FOR RESIDUE MG E 801
25CC7SOFTWARELYS E:52 , THR E:53 , ASP E:145 , THR E:181 , ATP E:903BINDING SITE FOR RESIDUE MG E 702
26CC8SOFTWARETHR E:290 , GLY E:291 , THR E:292 , GLY E:293 , LYS E:294 , THR E:295 , LEU E:296 , SER E:330 , TRP E:331 , ARG E:451 , ILE E:472 , SER E:473 , ASP E:474 , MG E:801 , LYS F:457 , MET F:458 , ARG F:459 , SER F:461 , TRP F:462 , HIS F:463BINDING SITE FOR RESIDUE ATP E 901
27CC9SOFTWAREGLY E:49 , THR E:50 , GLY E:51 , LYS E:52 , THR E:53 , LEU E:54 , GLU E:78 , SER E:89 , PHE E:90 , ILE E:239 , THR E:240 , HOH E:522 , MG E:702 , LEU F:223 , LYS F:224 , ARG F:226 , THR F:228 , SER F:229 , HIS F:230 , MG F:701BINDING SITE FOR RESIDUE ATP E 903
28DC1SOFTWARETHR F:295 , GLU F:318 , GLU F:319 , ATP F:901BINDING SITE FOR RESIDUE MG F 802
29DC2SOFTWARESER E:48 , ATP E:903 , LYS F:224BINDING SITE FOR RESIDUE MG F 701
30DC3SOFTWARELYS F:52 , THR F:53 , ASP F:145 , ATP F:903BINDING SITE FOR RESIDUE MG F 520
31DC4SOFTWARETPO A:432 , LYS A:457 , MET A:458 , ARG A:459 , GLY A:460 , SER A:461 , TRP A:462 , HIS A:463 , LYS A:465 , GLY F:291 , THR F:292 , GLY F:293 , LYS F:294 , THR F:295 , LEU F:296 , GLU F:318 , SER F:330 , TRP F:331 , ARG F:451 , ILE F:472 , SER F:473 , MG F:802BINDING SITE FOR RESIDUE ATP F 901
32DC5SOFTWARELYS A:224 , LEU A:225 , ARG A:226 , THR A:228 , HIS A:230 , MG A:702 , GLY F:49 , THR F:50 , GLY F:51 , LYS F:52 , THR F:53 , LEU F:54 , GLU F:78 , SER F:89 , PHE F:90 , ILE F:239 , THR F:240 , ASP F:241 , MG F:520BINDING SITE FOR RESIDUE ATP F 903

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3K0E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3K0E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3K0E)

(-) PROSITE Motifs  (1, 12)

Asymmetric/Biological Unit (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1KAICPS51146 KaiC domain profile.KAIC_SYNE719-260
 
 
 
 
 
261-493
 
 
 
 
 		  12A:19-260
B:19-260
C:19-260
D:19-260
E:19-260
F:19-260
A:261-493
B:261-493
C:261-493
D:261-493
E:261-493
F:261-493

(-) Exons   (0, 0)

(no "Exon" information available for 3K0E)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:506
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:506
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513      
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSELSRIVRGVQEKGPES 519
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee..............ee....eeee.....hhhhhhhhhhhhhhhhhh..eeeee...hhhhhhhhhhhh...hhhhhhh..eeeee.............hhhhhhhhhhhhhhhhhh..eeeee.hhhhhh...hhhhhhhhhhhhhhhhhhhh.eeeeee.............hhhhhh.eeeeee..........eeeeeee........eeeeeee..eeee....................hhhhhhhhh......eeeeee.....hhhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhh...hhhhhh...eee........hhhhhhhhhhhhhhh....eeeeehhhhh.....hhhhhhhhhhhhhhhhhh..eeeeee.....................eeeee..eee..eeeeeeeeeee.........eeeee....eeeeee.....hhhhh..................hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----KAIC  PDB: A:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: A:261-493 UniProt: 261-493                                                                                                                                                                                                    -------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k0e A  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSELSRIVRGVQEKGPES 519
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513      
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO                                                                                   


Chain B from PDB  Type:PROTEIN  Length:491
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:491
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503 
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSE 504
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh........eeeeeee...hhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhh....hhhhhhhh..eeee............hhhhhhhhhhhhhhhhhhhh..eeee..hhhhhh...hhhhhhhhhhhhhhhhhhhh.eeeeeeee...........hhhhhh.eeeeeeee......eeeeeeeee.........eeee......ee...............ee...hhhhhhhh...ee...eeeeee....hhhhhhhhhhhhhhhh....eeee...hhhhhhhhhhhhh.hhhhhhhh...ee...hhhhhhhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...eeeeee..............hhhhh.eeeee..ee....eeeeeeeeee.........eeee......eeeee...................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----KAIC  PDB: B:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: B:261-493 UniProt: 261-493                                                                                                                                                                                                    ----------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k0e B  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSE 504
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503 
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                                     
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO                                                                    


Chain C from PDB  Type:PROTEIN  Length:488
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:488
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493        
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDE 501
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee.....hhhhhhh..ee...eeeeee.....hhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhh..hhhhhhhh..eee.................hhhhhhhhhhhhhh....eeeeehhhhh.....hhhhhhhhhhhhhhhhhhh..eeeee..............hhhhhh.eeeeeeee......eeeeeeeee.........eeeeee..eeee....................hhhhhhhh........eeeeee....hhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhh.hhhhhh.....ee...hhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhh..hhhhhhhhhhhhhhhhhhh..eeee.................hhhhh.eeeeeeeee....eeee..eeee.........eeeeee..eeeeeee...ee.......ee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----KAIC  PDB: C:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: C:261-493 UniProt: 261-493                                                                                                                                                                                                    -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k0e C  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDE 501
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493        
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                                  
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO                                                                 


Chain D from PDB  Type:PROTEIN  Length:485
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:485
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493     
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRIT 498
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee.....hhhhhh...ee...eeeeee....hhhhhhhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhh.hhhhhhhh..eeeee.............hhhhhhhhhhhhhhhhh...eeeee.hhhhhh...hhhhhhhhhhhhhhhhhhh..eeeeeee............hhhhhh.eeeee..eee..eee.eeeeeee........eee.........................ee...hhhhhhh....ee...eeeee.....hhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhh..hhhhhhhhh.eee...hhhhh.hhhhhhhhhhhhhhhh..eeee..........hhhhhhhhhhhhhhhhhhh..eeeee......................eeee.eeeee..eeeee..eeee.........eeeeee..eeeeeee................ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----KAIC  PDB: D:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: D:261-493 UniProt: 261-493                                                                                                                                                                                                    ----- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k0e D  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRIT 498
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493     
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                               
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO                                                              


Chain E from PDB  Type:PROTEIN  Length:492
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:492
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503  
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSEL 505
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......ee.....hhhhhh...ee....eeeeee...hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhh.hhhhhhhh..eeeee...........hhhhhhhhhhhhhhhhhhhh..eeeeehhhhh.....hhhhhhhhhhhhhhhhhhhh.eeeeeeee...........hhhhhh.eeeeeeee......eeeeeeeee.........eeeeee..eeee...............ee...hhhhhhhh...ee...eeeee.....hhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhh..hhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh..eeeee.........hhhhhhhhhhhhhhhhhh...eeeee................hhhhh.eeee...............eee............eee....eee......ee.......ee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----KAIC  PDB: E:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: E:261-493 UniProt: 261-493                                                                                                                                                                                                    ------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3k0e E  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSEL 505
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503  
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                                      
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO                                                                     


Chain F from PDB  Type:PROTEIN  Length:506
 aligned with KAIC_SYNE7 | Q79PF4 from UniProtKB/Swiss-Prot  Length:519

    Alignment length:506
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513      
           KAIC_SYNE7    14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSELSRIVRGVQEKGPES 519
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF01 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF02 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF03 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF04 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF05 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF06 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (6)
           Pfam domains (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF07 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (7)
           Pfam domains (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF08 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (8)
           Pfam domains (9) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF09 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (9)
          Pfam domains (10) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF10 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (10)
          Pfam domains (11) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF11 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (11)
          Pfam domains (12) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KaiC-3k0eF12 F:263-482                                                                                                                                                                                                      ------------------------------------- Pfam domains (12)
         Sec.struct. author .............hhhhhh........eeeeee....hhhhhhhhhhhhhhhh....eeeee...hhhhhhhhh.....hhhhhhhh..eeeee............hhhhhhhhhhhhhhhhhh...eeeee.hhhhhh...hhhhhhhhhhhhhhhhhhhh.eeeeee.............hhhhhh.eeeeeeee......eeeeeeeee.........eeeeee..eeee......................hhhhhh........eeeeeee...hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh..hhhhhhhh..eee...hhhhhhhhhhhhhhhhh.......eeeee.........hhhhhhhhhhhhhhhhhhh..eeeeeeee...................eeeeee..ee..ee..eeeeee............ee......ee......ee.......ee....................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----KAIC  PDB: F:19-260 UniProt: 19-260                                                                                                                                                                                                               KAIC  PDB: F:261-493 UniProt: 261-493                                                                                                                                                                                                    -------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3k0e F  14 EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSINDSHIstITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRITVDEKSELSRIVRGVQEKGPES 519
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513      
                                                                                                                                                                                                                                                                                                                                                                                                                                                           431-SEP                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                                                                            432-TPO
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3K0E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3K0E)

(-) Pfam Domains  (1, 12)

Asymmetric/Biological Unit
(-)
Clan: P-loop_NTPase (1112)
(-)
Family: KaiC (9)
(-)
Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) (7)
1aKaiC-3k0eF01F:263-482
1bKaiC-3k0eF02F:263-482
1cKaiC-3k0eF03F:263-482
1dKaiC-3k0eF04F:263-482
1eKaiC-3k0eF05F:263-482
1fKaiC-3k0eF06F:263-482
1gKaiC-3k0eF07F:263-482
1hKaiC-3k0eF08F:263-482
1iKaiC-3k0eF09F:263-482
1jKaiC-3k0eF10F:263-482
1kKaiC-3k0eF11F:263-482
1lKaiC-3k0eF12F:263-482

(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (KAIC_SYNE7 | Q79PF4)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0004712    protein serine/threonine/tyrosine kinase activity    Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; ATP + a protein threonine = ADP + protein threonine phosphate; and ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0007623    circadian rhythm    Any biological process in an organism that recurs with a regularity of approximately 24 hours.
    GO:0009649    entrainment of circadian clock    The synchronization of a circadian rhythm to environmental time cues such as light.
    GO:0042754    negative regulation of circadian rhythm    Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0042752    regulation of circadian rhythm    Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.
    GO:0070297    regulation of phosphorelay signal transduction system    Any process that modulates the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0048511    rhythmic process    Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ATP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SEP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    TPO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3k0e)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3k0e
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  KAIC_SYNE7 | Q79PF4
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.7.11.1
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  KAIC_SYNE7 | Q79PF4
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KAIC_SYNE7 | Q79PF4: 1tf7 1u9i 2gbl 3dvl 3jzm 3k09 3k0a 3k0c 3k0f 3s1a 4dug 4ijm 4tl6 4tl7 4tl8 4tl9 4tla 4tlb 4tlc 4tld 4tle 5c5e 5n8y

(-) Related Entries Specified in the PDB File

3dvl 3jzm 3k09 3k0a 3k0c 3k0f