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(-)Asym./Biol. Unit
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(-) Description

Title :  A REFINED MODEL OF THE PROTOTYPICAL SALMONELLA TYPHIMURIUM T3SS BASAL BODY REVEALS THE MOLECULAR BASIS FOR ITS ASSEMBLY
 
Authors :  N. G. Sgourakis, L. J. Worrall, N. C. J. Strynadka, D. Baker
Date :  10 Jul 12  (Deposition) - 22 May 13  (Release) - 22 May 13  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  NOT APPLICABLE
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Keywords :  T3Ss, Cell Invasion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. R. Bergeron, L. J. Worrall, N. G. Sgourakis, F. Dimaio, R. A. Pfuetzner, H. B. Felise, M. Vuckovic, A. C. Yu, S. I. Miller, D. Baker, N. C. Strynadka
A Refined Model Of The Prototypical Salmonella Spi-1 T3Ss Basal Body Reveals The Molecular Basis For Its Assembly.
Plos Pathog. V. 9 03307 2013
PubMed-ID: 23633951  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1003307

(-) Compounds

Molecule 1 - PROTEIN PRGH
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
    Fragment: UNP RESIDUES 14-119
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
    Organism Taxid: 90371

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRSTUVWX

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3J1W)

(-) Sites  (0, 0)

(no "Site" information available for 3J1W)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3J1W)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3J1W)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3J1W)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3J1W)

(-) Exons   (0, 0)

(no "Exon" information available for 3J1W)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w A  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain B from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w B  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain C from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w C  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain D from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w D  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain E from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w E  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain F from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w F  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain G from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w G  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain H from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w H  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain I from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w I  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain J from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w J  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain K from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w K  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain L from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w L  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain M from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w M  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain N from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w N  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain O from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w O  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain P from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w P  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain Q from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w Q  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain R from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w R  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain S from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w S  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain T from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w T  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain U from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w U  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain V from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w V  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain W from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w W  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain X from PDB  Type:PROTEIN  Length:106
 aligned with PRGH_SALTY | P41783 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:106
                                    23        33        43        53        63        73        83        93       103       113      
           PRGH_SALTY    14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eee...eeeeeeeehhhhhhhhh........eeeee.......eeeee......eeeeeee..eeeeee......eee..eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3j1w X  14 PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW 119
                                    23        33        43        53        63        73        83        93       103       113
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3J1W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3J1W)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3J1W)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X   (PRGH_SALTY | P41783)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PRGH_SALTY | P41783: 2y9j 3gr0 3gr1 3j1x 3j6d 4g1i 4g2s 5tcp 5tcr

(-) Related Entries Specified in the PDB File

3j1v 3j1x 4g08 4g1i