Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH ACETYL COA
 
Authors :  K. S. Gajiwala, S Margosiak, J. Lu, J. Cortez, Y. Su, Z. Nie, K. Appelt
Date :  06 Aug 09  (Deposition) - 25 Aug 09  (Release) - 06 Oct 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Fabh, Fatty Acid Biosynthesis, Antibiotic, Acyltransferase, Cytoplasm, Lipid Synthesis, Multifunctional Enzyme, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. S. Gajiwala, S. Margosiak, J. Lu, J. Cortez, Y. Su, Z. Nie, K. Appelt
Crystal Structures Of Bacterial Fabh Suggest A Molecular Basis For The Substrate Specificity Of The Enzyme.
Febs Lett. V. 583 2939 2009
PubMed-ID: 19665020  |  Reference-DOI: 10.1016/J.FEBSLET.2009.08.001
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
    ChainsA, B, C, D
    EC Number2.3.1.180
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneEF_2885, FABH
    MutationYES
    Organism ScientificENTEROCOCCUS FAECALIS
    Organism Taxid1351
    Synonym3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III, BETA-KETOACYL-ACP SYNTHASE III, KAS III

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1ACO4Ligand/IonACETYL COENZYME *A
2CSO8Mod. Amino AcidS-HYDROXYCYSTEINE
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2CSO4Mod. Amino AcidS-HYDROXYCYSTEINE
Biological Unit 2 (2, 6)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2CSO4Mod. Amino AcidS-HYDROXYCYSTEINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:34 , TRP A:38 , THR A:43 , ARG A:156 , SER A:157 , VAL A:160 , LEU A:161 , ARG A:221 , ILE A:223 , HIS A:250 , ALA A:252 , ARG A:255 , ASN A:280BINDING SITE FOR RESIDUE ACO A 401
2AC2SOFTWAREASP B:33 , THR B:34 , TRP B:38 , ILE B:39 , THR B:43 , CYS B:117 , ARG B:156 , ARG B:221 , ILE B:223 , PHE B:224 , HIS B:250 , ALA B:252 , ARG B:255 , ASN B:280 , PHE B:312 , GLY B:313BINDING SITE FOR RESIDUE ACO B 401
3AC3SOFTWAREASN B:296 , GLY B:297 , THR C:34 , TRP C:38 , ARG C:42 , THR C:43 , CYS C:117 , ARG C:156 , SER C:157 , VAL C:160 , LEU C:161 , GLY C:220 , ARG C:221 , ILE C:223 , PHE C:224 , HIS C:250 , ALA C:252 , SER C:253 , ARG C:255 , ILE C:256 , ASN C:280 , PHE C:312 , GLY C:313BINDING SITE FOR RESIDUE ACO C 401
4AC4SOFTWARETHR D:34 , TRP D:38 , ARG D:42 , THR D:43 , ARG D:156 , VAL D:160 , LEU D:161 , ARG D:221 , ILE D:223 , PHE D:224 , HIS D:250 , ALA D:252 , ILE D:256 , ASN D:280 , PHE D:312BINDING SITE FOR RESIDUE ACO D 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3IL4)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Met A:92 -Pro A:93
2Gly A:315 -Leu A:316
3Met B:92 -Pro B:93
4Gly B:315 -Leu B:316
5Met C:92 -Pro C:93
6Gly C:315 -Leu C:316
7Met D:92 -Pro D:93
8Gly D:315 -Leu D:316

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3IL4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3IL4)

(-) Exons   (0, 0)

(no "Exon" information available for 3IL4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:318
 aligned with FABH_ENTFA | Q820T1 from UniProtKB/Swiss-Prot  Length:321

    Alignment length:320
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321
           FABH_ENTFA     2 KNYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3il4A01 A:6-175  [code=3.40.47.10, no name defined]                                                                                                                       ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee....eeehhhhhh....hhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.hhh....hhhhhh...eeeeeeeeeee....eeeeeeee.hhhhh.ee...............--....eehhhhhhhhhhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhh.hhhhh..hhhhhh.hhhhhhhhhhhhhhhh.........eeeeeeee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3il4 A   6 KNYARIScTSRYVPENcVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHK--SKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 325
                                   |15      | 25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205    |  215       225       235       245       255       265       275       285       295       305       315       325
                                  13-CSO   22-CSO                                                                                                                                                                                     210  |                                                                                                                
                                                                                                                                                                                                                                         213                                                                                                                

Chain B from PDB  Type:PROTEIN  Length:317
 aligned with FABH_ENTFA | Q820T1 from UniProtKB/Swiss-Prot  Length:321

    Alignment length:319
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312         
           FABH_ENTFA     3 NYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3il4B01 B:7-175  [code=3.40.47.10, no name defined]                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....eeehhhhhh....hhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.hhh....hhhhhh...eeeeeeeeeee....eeeeeeee.hhhhh.ee...............--....eehhhhhhhhhhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhh.hhhhh..hhhhhh.hhhhhhhhhhhhhhhh.........eeeeeeee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3il4 B   7 NYARIScTSRYVPENcVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHK--SKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 325
                                  | 16     |  26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206   |  |216       226       236       246       256       266       276       286       296       306       316         
                                 13-CSO   22-CSO                                                                                                                                                                                     210  |                                                                                                                
                                                                                                                                                                                                                                        213                                                                                                                

Chain C from PDB  Type:PROTEIN  Length:317
 aligned with FABH_ENTFA | Q820T1 from UniProtKB/Swiss-Prot  Length:321

    Alignment length:319
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312         
           FABH_ENTFA     3 NYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3il4C01 C:7-175  [code=3.40.47.10, no name defined]                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....eeehhhhhh....hhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.hhh....hhhhhh...eeeeeeeeeee....eeeeeeee.hhhhh.ee...............--....eehhhhhhhhhhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhh.hhhhh..hhhhhh.hhhhhhhhhhhhhhhh.........eeeeeeee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3il4 C   7 NYARIScTSRYVPENcVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHK--SKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 325
                                  | 16     |  26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206   |  |216       226       236       246       256       266       276       286       296       306       316         
                                 13-CSO   22-CSO                                                                                                                                                                                     210  |                                                                                                                
                                                                                                                                                                                                                                        213                                                                                                                

Chain D from PDB  Type:PROTEIN  Length:318
 aligned with FABH_ENTFA | Q820T1 from UniProtKB/Swiss-Prot  Length:321

    Alignment length:320
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321
           FABH_ENTFA     2 KNYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3il4D01 D:6-175  [code=3.40.47.10, no name defined]                                                                                                                       ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee....eeehhhhhh....hhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.hhh....hhhhhh...eeeeeeeeeee....eeeeeeee.hhhhh.ee...............--....eehhhhhhhhhhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhh.hhhhh..hhhhhh.hhhhhhhhhhhhhhhh.........eeeeeeee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3il4 D   6 KNYARIScTSRYVPENcVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHK--SKTLQMEGRSIFDFAIKDVSQNILSLVTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 325
                                   |15      | 25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205    |  215       225       235       245       255       265       275       285       295       305       315       325
                                  13-CSO   22-CSO                                                                                                                                                                                     210  |                                                                                                                
                                                                                                                                                                                                                                         213                                                                                                                

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3IL4)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3IL4)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (FABH_ENTFA | Q820T1)
molecular function
    GO:0004315    3-oxoacyl-[acyl-carrier-protein] synthase activity    Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein].
    GO:0033818    beta-ketoacyl-acyl-carrier-protein synthase III activity    Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0006633    fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
    GO:0006631    fatty acid metabolic process    The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ACO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CSO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:315 - Leu A:316   [ RasMol ]  
    Gly B:315 - Leu B:316   [ RasMol ]  
    Gly C:315 - Leu C:316   [ RasMol ]  
    Gly D:315 - Leu D:316   [ RasMol ]  
    Met A:92 - Pro A:93   [ RasMol ]  
    Met B:92 - Pro B:93   [ RasMol ]  
    Met C:92 - Pro C:93   [ RasMol ]  
    Met D:92 - Pro D:93   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3il4
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  FABH_ENTFA | Q820T1
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.3.1.180
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  FABH_ENTFA | Q820T1
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FABH_ENTFA | Q820T13il5 3il6

(-) Related Entries Specified in the PDB File

3il3 STRUCTURE OF HAEMOPHILUS INFLUENZAE FABH
3il5 STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH 2-({4-BROMO- 3-[(DIETHYLAMINO)SULFONYL]BENZOYL}AMINO)BENZOIC ACID
3il6 STRUCTURE OF E. FAECALIS FABH IN COMPLEX WITH 2-({4-[(3R, 5S)-3,5-DIMETHYLPIPERIDIN-1-YL]-3-PHENOXYBENZOYL}AMINO) BENZOIC ACID
3il7 CRYSTAL STRUCTURE OF S. AUREUS FABH
3il9 STRUCTURE OF E. COLI FABH