Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)

(-) Description

Title :  3-D X-RAY STRUCTURE OF THE SULFIDE:QUINONE OXIDOREDUCTASE OF THE HYPERTHERMOPHILIC BACTERIUM AQUIFEX AEOLICUS IN COMPLEX WITH DECYLUBIQUINONE
 
Authors :  M. Marcia, U. Ermler, G. H. Peng, H. Michel
Date :  23 Jun 09  (Deposition) - 14 Jul 09  (Release) - 14 Jul 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,C,E  (1x)
Biol. Unit 2:  B,D,F  (1x)
Biol. Unit 3:  A,B,C,D,E,F  (1x)
Keywords :  Monotopic Membrane Protein, Flavoprotein, Polysulfur, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Marcia, U. Ermler, G. H. Peng, H. Michel
The Structure Of Aquifex Aeolicus Sulfide:Quinone Oxidoreductase, A Basis To Understand Sulfide Detoxification And Respiration
Proc. Natl. Acad. Sci. Usa V. 106 9625 2009
PubMed-ID: 19487671  |  Reference-DOI: 10.1073/PNAS.0904165106
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SULFIDE-QUINONE REDUCTASE
    Chains: A, B, C, D, E, F
    EC Number: 1.8.5.-
    Organism Scientific: AQUIFEX AEOLICUS
    Organism Taxid: 63363
    Strain: VF5

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A C E 
Biological Unit 2 (1x):  B D F
Biological Unit 3 (1x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 68)

Asymmetric Unit (7, 68)
No.NameCountTypeFull Name
1CSS12Mod. Amino AcidS-MERCAPTOCYSTEINE
2DCQ6Ligand/Ion2-DECYL-5,6-DIMETHOXY-3-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE
3FAD6Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
4H2S6Ligand/IonHYDROSULFURIC ACID
5LMT6Ligand/IonDODECYL-BETA-D-MALTOSIDE
6PS98Ligand/IonOCTATHIOCANE
7SO424Ligand/IonSULFATE ION
Biological Unit 1 (7, 33)
No.NameCountTypeFull Name
1CSS6Mod. Amino AcidS-MERCAPTOCYSTEINE
2DCQ3Ligand/Ion2-DECYL-5,6-DIMETHOXY-3-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE
3FAD3Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
4H2S3Ligand/IonHYDROSULFURIC ACID
5LMT3Ligand/IonDODECYL-BETA-D-MALTOSIDE
6PS93Ligand/IonOCTATHIOCANE
7SO412Ligand/IonSULFATE ION
Biological Unit 2 (7, 35)
No.NameCountTypeFull Name
1CSS6Mod. Amino AcidS-MERCAPTOCYSTEINE
2DCQ3Ligand/Ion2-DECYL-5,6-DIMETHOXY-3-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE
3FAD3Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
4H2S3Ligand/IonHYDROSULFURIC ACID
5LMT3Ligand/IonDODECYL-BETA-D-MALTOSIDE
6PS95Ligand/IonOCTATHIOCANE
7SO412Ligand/IonSULFATE ION
Biological Unit 3 (7, 68)
No.NameCountTypeFull Name
1CSS12Mod. Amino AcidS-MERCAPTOCYSTEINE
2DCQ6Ligand/Ion2-DECYL-5,6-DIMETHOXY-3-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE
3FAD6Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
4H2S6Ligand/IonHYDROSULFURIC ACID
5LMT6Ligand/IonDODECYL-BETA-D-MALTOSIDE
6PS98Ligand/IonOCTATHIOCANE
7SO424Ligand/IonSULFATE ION

(-) Sites  (56, 56)

Asymmetric Unit (56, 56)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE A:8 , GLY A:9 , GLY A:10 , GLY A:11 , VAL A:12 , GLY A:13 , SER A:34 , ASP A:35 , ARG A:36 , THR A:42 , PRO A:43 , LYS A:77 , ALA A:78 , ALA A:104 , THR A:105 , GLY A:106 , ILE A:123 , CYS A:124 , PRO A:159 , GLY A:293 , VAL A:294 , LYS A:312 , THR A:313 , GLY A:314 , ILE A:317 , LYS A:382 , SO4 A:433 , HOH A:437 , HOH A:439 , HOH A:453 , HOH A:458 , DCQ A:500 , HOH A:513 , HOH A:515 , H2S A:700 , PS9 A:800 , HOH A:1162 , HOH A:1247 , HOH A:1509 , HOH A:1512BINDING SITE FOR RESIDUE FAD A 441
02AC2SOFTWAREGLY A:314 , MET A:315 , GLU A:318 , ILE A:346 , PHE A:381 , PHE A:385 , PHE A:402 , GLU A:403 , FAD A:441 , LMT A:600 , HOH A:1162 , HOH A:1514 , DCQ B:500BINDING SITE FOR RESIDUE DCQ A 500
03AC3SOFTWARELYS A:373 , TRP A:377 , PHE A:381 , PHE A:410 , SO4 A:434 , DCQ A:500 , LMT B:600BINDING SITE FOR RESIDUE LMT A 600
04AC4SOFTWARECYS A:124 , MET A:251 , FAD A:441BINDING SITE FOR RESIDUE H2S A 700
05AC5SOFTWARECSS A:156 , PHE A:157 , GLY A:158 , PRO A:159 , CSS A:347 , FAD A:441BINDING SITE FOR RESIDUE PS9 A 800
06AC6SOFTWAREARG A:369 , LYS A:412 , LYS E:172 , HOH E:589BINDING SITE FOR RESIDUE SO4 A 431
07AC7SOFTWARETRP A:391 , ARG A:394 , ASN A:395 , HOH A:436 , HOH A:1182 , HOH A:1434 , SER B:401BINDING SITE FOR RESIDUE SO4 A 432
08AC8SOFTWARELYS A:77 , LYS A:108 , PRO A:257 , GLU A:258 , VAL A:259 , FAD A:441 , HOH A:515 , HOH A:616 , HOH A:1359BINDING SITE FOR RESIDUE SO4 A 433
09AC9SOFTWAREGLY A:375 , LYS A:376 , TRP A:377 , LMT A:600BINDING SITE FOR RESIDUE SO4 A 434
10BC1SOFTWARELYS A:172 , HOH A:1315 , ARG C:369BINDING SITE FOR RESIDUE SO4 A 435
11BC2SOFTWAREILE B:8 , GLY B:9 , GLY B:10 , GLY B:11 , VAL B:12 , GLY B:13 , SER B:34 , ASP B:35 , ARG B:36 , THR B:42 , PRO B:43 , LYS B:77 , ALA B:78 , ALA B:104 , THR B:105 , GLY B:106 , ILE B:123 , CYS B:124 , PRO B:159 , GLY B:293 , VAL B:294 , LYS B:312 , THR B:313 , GLY B:314 , ILE B:317 , CSS B:347 , LYS B:382 , HOH B:435 , HOH B:442 , HOH B:443 , HOH B:446 , HOH B:449 , HOH B:461 , HOH B:489 , DCQ B:500 , H2S B:700 , HOH B:740 , PS9 B:802 , HOH B:984 , HOH B:1515 , HOH B:1518BINDING SITE FOR RESIDUE FAD B 441
12BC3SOFTWAREDCQ A:500 , MET B:315 , GLU B:318 , ILE B:346 , ILE B:348 , PHE B:381 , PHE B:385 , TYR B:388 , PHE B:402 , GLU B:403 , LEU B:407 , FAD B:441 , HOH B:446 , LMT B:600 , HOH B:1518 , HOH B:1519BINDING SITE FOR RESIDUE DCQ B 500
13BC4SOFTWAREPHE A:381 , LMT A:600 , LYS B:373 , TRP B:377 , PHE B:381 , PHE B:410 , SO4 B:434 , DCQ B:500 , HOH B:605BINDING SITE FOR RESIDUE LMT B 600
14BC5SOFTWARECYS B:124 , FAD B:441BINDING SITE FOR RESIDUE H2S B 700
15BC6SOFTWARECSS B:156 , PHE B:157 , GLY B:158BINDING SITE FOR RESIDUE PS9 B 800
16BC7SOFTWAREGLY B:158 , PRO B:159 , GLU B:162 , CSS B:347 , ILE B:348 , FAD B:441BINDING SITE FOR RESIDUE PS9 B 802
17BC8SOFTWAREARG B:369 , LYS B:412 , LYS D:172BINDING SITE FOR RESIDUE SO4 B 431
18BC9SOFTWARESER A:401 , TRP B:391 , ARG B:394 , ASN B:395 , HOH B:447 , HOH B:1457 , HOH B:1480BINDING SITE FOR RESIDUE SO4 B 432
19CC1SOFTWARELYS B:77 , LYS B:108 , PRO B:257 , GLU B:258BINDING SITE FOR RESIDUE SO4 B 433
20CC2SOFTWAREGLY B:375 , LYS B:376 , TRP B:377 , LMT B:600 , HOH B:1329BINDING SITE FOR RESIDUE SO4 B 434
21CC3SOFTWAREGLY C:9 , GLY C:10 , GLY C:11 , VAL C:12 , GLY C:13 , SER C:34 , ASP C:35 , ARG C:36 , THR C:42 , PRO C:43 , LYS C:77 , ALA C:78 , ALA C:104 , THR C:105 , GLY C:106 , ILE C:123 , CYS C:124 , PRO C:159 , GLY C:293 , VAL C:294 , LYS C:312 , THR C:313 , GLY C:314 , ILE C:317 , LYS C:382 , SO4 C:433 , HOH C:435 , HOH C:439 , HOH C:442 , HOH C:457 , HOH C:459 , HOH C:466 , HOH C:487 , DCQ C:500 , HOH C:641 , H2S C:700 , HOH C:770 , PS9 C:800 , HOH C:1027BINDING SITE FOR RESIDUE FAD C 441
22CC4SOFTWAREGLY C:314 , MET C:315 , GLU C:318 , ILE C:346 , PHE C:381 , PHE C:385 , TYR C:388 , GLU C:403 , FAD C:441 , HOH C:459 , HOH C:502 , TYR D:388 , DCQ D:500BINDING SITE FOR RESIDUE DCQ C 500
23CC5SOFTWARELYS C:373 , TRP C:377 , PHE C:381 , SO4 C:434 , LMT D:600BINDING SITE FOR RESIDUE LMT C 600
24CC6SOFTWARECYS C:124 , FAD C:441BINDING SITE FOR RESIDUE H2S C 700
25CC7SOFTWARECSS C:156 , GLY C:158 , PRO C:159 , CSS C:347 , ILE C:348 , ALA C:349 , FAD C:441BINDING SITE FOR RESIDUE PS9 C 800
26CC8SOFTWARETRP C:391 , ARG C:394 , ASN C:395 , HOH C:1155 , SER D:401BINDING SITE FOR RESIDUE SO4 C 432
27CC9SOFTWARELYS C:77 , LYS C:108 , PRO C:257 , GLU C:258 , VAL C:259 , FAD C:441 , HOH C:641 , HOH C:665BINDING SITE FOR RESIDUE SO4 C 433
28DC1SOFTWAREGLY C:375 , LYS C:376 , TRP C:377 , LMT C:600BINDING SITE FOR RESIDUE SO4 C 434
29DC2SOFTWARELYS C:172 , ARG E:369BINDING SITE FOR RESIDUE SO4 C 431
30DC3SOFTWAREILE D:8 , GLY D:9 , GLY D:10 , GLY D:11 , VAL D:12 , GLY D:13 , SER D:34 , ASP D:35 , ARG D:36 , THR D:42 , PRO D:43 , LYS D:77 , ALA D:78 , ALA D:104 , THR D:105 , GLY D:106 , ILE D:123 , CYS D:124 , PRO D:159 , VAL D:259 , GLY D:293 , VAL D:294 , LYS D:312 , THR D:313 , GLY D:314 , ILE D:317 , LYS D:382 , HOH D:437 , HOH D:443 , HOH D:445 , HOH D:466 , DCQ D:500 , HOH D:513 , H2S D:700 , HOH D:900 , HOH D:1171 , HOH D:1326 , HOH D:1347BINDING SITE FOR RESIDUE FAD D 441
31DC4SOFTWAREDCQ C:500 , GLY D:314 , MET D:315 , GLU D:318 , ILE D:346 , PHE D:381 , PHE D:385 , PHE D:402 , GLU D:403 , FAD D:441 , HOH D:443 , LMT D:600BINDING SITE FOR RESIDUE DCQ D 500
32DC5SOFTWAREPHE C:381 , LMT C:600 , LYS D:373 , TRP D:377 , PHE D:381 , SO4 D:434 , DCQ D:500BINDING SITE FOR RESIDUE LMT D 600
33DC6SOFTWARECYS D:124 , CSS D:156 , FAD D:441BINDING SITE FOR RESIDUE H2S D 700
34DC7SOFTWARECSS D:156 , GLY D:158 , PS9 D:802BINDING SITE FOR RESIDUE PS9 D 800
35DC8SOFTWARECSS D:347 , PS9 D:800BINDING SITE FOR RESIDUE PS9 D 802
36DC9SOFTWAREARG D:369 , LYS D:412 , LYS F:172BINDING SITE FOR RESIDUE SO4 D 431
37EC1SOFTWARESER C:401 , TRP D:391 , ARG D:394 , ASN D:395 , HOH D:478BINDING SITE FOR RESIDUE SO4 D 432
38EC2SOFTWARELYS D:77 , LYS D:108 , PRO D:257 , GLU D:258BINDING SITE FOR RESIDUE SO4 D 433
39EC3SOFTWAREMET D:374 , GLY D:375 , LYS D:376 , LMT D:600BINDING SITE FOR RESIDUE SO4 D 434
40EC4SOFTWAREILE E:8 , GLY E:9 , GLY E:10 , GLY E:11 , VAL E:12 , GLY E:13 , SER E:34 , ASP E:35 , ARG E:36 , THR E:42 , PRO E:43 , LYS E:77 , ALA E:78 , ALA E:104 , THR E:105 , GLY E:106 , ILE E:123 , CYS E:124 , GLY E:293 , VAL E:294 , LYS E:312 , THR E:313 , GLY E:314 , LYS E:382 , SO4 E:433 , HOH E:436 , HOH E:444 , HOH E:446 , HOH E:459 , HOH E:461 , HOH E:474 , DCQ E:500 , H2S E:700 , PS9 E:800 , HOH E:1328 , HOH E:1365 , HOH E:1526BINDING SITE FOR RESIDUE FAD E 441
41EC5SOFTWAREGLY E:314 , MET E:315 , GLU E:318 , ILE E:346 , PHE E:381 , PHE E:385 , PHE E:402 , FAD E:441 , HOH E:1528 , DCQ F:500BINDING SITE FOR RESIDUE DCQ E 500
42EC6SOFTWARELYS E:373 , TRP E:377 , PHE E:381 , LEU E:411 , SO4 E:434 , HOH E:435 , LMT F:600BINDING SITE FOR RESIDUE LMT E 600
43EC7SOFTWARECYS E:124 , FAD E:441BINDING SITE FOR RESIDUE H2S E 700
44EC8SOFTWARECSS E:156 , GLY E:158 , PRO E:159 , CSS E:347 , FAD E:441BINDING SITE FOR RESIDUE PS9 E 800
45EC9SOFTWARETRP E:391 , ARG E:394 , ASN E:395 , HOH E:488 , HOH E:720 , HOH E:1363 , HOH E:1387 , SER F:401BINDING SITE FOR RESIDUE SO4 E 432
46FC1SOFTWARELYS E:77 , LYS E:108 , PRO E:257 , GLU E:258 , VAL E:259 , FAD E:441 , HOH E:1354BINDING SITE FOR RESIDUE SO4 E 433
47FC2SOFTWAREGLY E:375 , LYS E:376 , TRP E:377 , LMT E:600BINDING SITE FOR RESIDUE SO4 E 434
48FC3SOFTWAREILE F:8 , GLY F:9 , GLY F:10 , GLY F:11 , VAL F:12 , GLY F:13 , SER F:34 , ASP F:35 , ARG F:36 , THR F:42 , PRO F:43 , LYS F:77 , ALA F:78 , ALA F:104 , THR F:105 , GLY F:106 , ILE F:123 , CYS F:124 , PRO F:159 , GLY F:293 , VAL F:294 , LYS F:312 , THR F:313 , GLY F:314 , ILE F:317 , LYS F:382 , SO4 F:433 , HOH F:435 , HOH F:436 , HOH F:438 , HOH F:462 , HOH F:498 , DCQ F:500 , HOH F:506 , HOH F:658 , H2S F:700 , PS9 F:800 , HOH F:1377 , HOH F:1448 , HOH F:1529 , HOH F:1532BINDING SITE FOR RESIDUE FAD F 441
49FC4SOFTWAREDCQ E:500 , GLY F:314 , MET F:315 , GLU F:318 , ILE F:346 , ILE F:348 , PHE F:381 , PHE F:385 , GLU F:403 , FAD F:441 , LMT F:600 , HOH F:1531 , HOH F:1532BINDING SITE FOR RESIDUE DCQ F 500
50FC5SOFTWAREPHE E:381 , LMT E:600 , LYS F:373 , PHE F:381 , SO4 F:434 , DCQ F:500BINDING SITE FOR RESIDUE LMT F 600
51FC6SOFTWARECYS F:124 , FAD F:441BINDING SITE FOR RESIDUE H2S F 700
52FC7SOFTWARECSS F:156 , GLY F:158 , PRO F:159 , CSS F:347 , ILE F:348 , FAD F:441BINDING SITE FOR RESIDUE PS9 F 800
53FC8SOFTWARELYS B:172 , ARG F:369BINDING SITE FOR RESIDUE SO4 F 431
54FC9SOFTWARESER E:401 , TRP F:391 , ARG F:394 , ASN F:395 , HOH F:446 , HOH F:714BINDING SITE FOR RESIDUE SO4 F 432
55GC1SOFTWARELYS F:77 , LYS F:108 , PRO F:257 , GLU F:258 , VAL F:259 , FAD F:441BINDING SITE FOR RESIDUE SO4 F 433
56GC2SOFTWAREGLY F:375 , LYS F:376 , TRP F:377 , LMT F:600BINDING SITE FOR RESIDUE SO4 F 434

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1A:280 -A:422
2A:419 -A:430
3B:280 -B:422
4B:419 -B:430
5C:280 -C:422
6C:419 -C:430
7D:280 -D:422
8D:419 -D:430
9E:280 -E:422
10E:419 -E:430
11F:280 -F:422
12F:419 -F:430

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Asp A:361 -Pro A:362
2Pro A:365 -Pro A:366
3Asp B:361 -Pro B:362
4Pro B:365 -Pro B:366
5Asp C:361 -Pro C:362
6Pro C:365 -Pro C:366
7Asp D:361 -Pro D:362
8Pro D:365 -Pro D:366
9Asp E:361 -Pro E:362
10Pro E:365 -Pro E:366
11Asp F:361 -Pro F:362
12Pro F:365 -Pro F:366

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HYW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HYW)

(-) Exons   (0, 0)

(no "Exon" information available for 3HYW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhh.eeee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhh..........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw A   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS                                                                               


Chain B from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhh.eeee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhh..........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw B   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS                                                                               


Chain C from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhhh.eee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhh..........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw C   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS                                                                               


Chain D from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhh.eeee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhh..........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw D   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS                                                                               


Chain E from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhh.eeee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhhh.........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw E   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS                                                                               


Chain F from PDB  Type:PROTEIN  Length:429
 aligned with SQRD_AQUAE | O67931 from UniProtKB/Swiss-Prot  Length:430

    Alignment length:429
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421         
           SQRD_AQUAE     2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh...eeeee....eee...hhhhhhh...hhhh.eee...hhhhh.eeee...eeeee....eeee....eee..eeee....eee....hhhhhh....hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh.hhhhh.eeee...............hhhhhhhhhhhhh..eee...eeeee...eeeee.....eeeee..eeeee.eee.hhhhhh..........................eee.....................hhhhhhhhhhhhhhhhhhhhh.....eee...eeeeee....eeeeeee.......eeeeeeehhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...eee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyw F   2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVScFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAIcIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCEGAPGSRC 430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151    |  161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     | 351       361       371       381       391       401       411       421         
                                                                                                                                                                                    156-CSS                                                                                                                                                                                        347-CSS
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3HYW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3HYW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HYW)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (SQRD_AQUAE | O67931)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0048038    quinone binding    Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CSS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    DCQ  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    H2S  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    LMT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PS9  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
    FC4  [ RasMol ]  +environment [ RasMol ]
    FC5  [ RasMol ]  +environment [ RasMol ]
    FC6  [ RasMol ]  +environment [ RasMol ]
    FC7  [ RasMol ]  +environment [ RasMol ]
    FC8  [ RasMol ]  +environment [ RasMol ]
    FC9  [ RasMol ]  +environment [ RasMol ]
    GC1  [ RasMol ]  +environment [ RasMol ]
    GC2  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asp A:361 - Pro A:362   [ RasMol ]  
    Asp B:361 - Pro B:362   [ RasMol ]  
    Asp C:361 - Pro C:362   [ RasMol ]  
    Asp D:361 - Pro D:362   [ RasMol ]  
    Asp E:361 - Pro E:362   [ RasMol ]  
    Asp F:361 - Pro F:362   [ RasMol ]  
    Pro A:365 - Pro A:366   [ RasMol ]  
    Pro B:365 - Pro B:366   [ RasMol ]  
    Pro C:365 - Pro C:366   [ RasMol ]  
    Pro D:365 - Pro D:366   [ RasMol ]  
    Pro E:365 - Pro E:366   [ RasMol ]  
    Pro F:365 - Pro F:366   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3hyw
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  SQRD_AQUAE | O67931
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  1.8.5.-
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  SQRD_AQUAE | O67931
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SQRD_AQUAE | O67931: 3hyv 3hyx

(-) Related Entries Specified in the PDB File

3hyv THE PROTEIN AS-PURIFIED FROM NATIVE SOURCE
3hyx THE SAME PROTEIN IN COMPLEX WITH AURACHIN C