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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE KINASE FROM CLOSTRIDIUM SYMBIOSUM ATCC 14940
 
Authors :  C. Chang, L. Freeman, R. Jedrzejczak, A. Joachimiak, Midwest Center Structural Genomics (Mcsg)
Date :  07 May 09  (Deposition) - 26 May 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.79
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Clostridium Symbiosum Atcc 14940, Putative Kinase, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, L. Freeman, R. Jedrzejczak, A. Joachimiak
Crystal Structure Of Putative Kinase From Clostridium Symbiosum Atcc 14940
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE KINASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMCSG19
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: CLOSTRIDIUM SYMBIOSUM ATCC 14940
    Organism Taxid: 411472

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric/Biological Unit (3, 12)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2MSE8Mod. Amino AcidSELENOMETHIONINE
3PO42Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:18 , GLU A:19 , TYR A:20 , GLY A:21 , SER A:22 , GLY A:23 , GLY A:24 , ARG A:25 , ARG A:173 , HOH A:233 , HOH A:234BINDING SITE FOR RESIDUE PO4 A 301
2AC2SOFTWAREGLU A:17 , ARG A:18 , TRP A:185 , HOH A:225BINDING SITE FOR RESIDUE CL A 302
3AC3SOFTWAREARG B:18 , GLU B:19 , GLY B:21 , SER B:22 , GLY B:23 , GLY B:24 , ARG B:25 , HOH B:230BINDING SITE FOR RESIDUE PO4 B 301
4AC4SOFTWAREGLU B:17 , ARG B:18 , TRP B:185BINDING SITE FOR RESIDUE CL B 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HDT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3HDT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HDT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HDT)

(-) Exons   (0, 0)

(no "Exon" information available for 3HDT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:169
                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee....hhhhhhhhhhhhhh.eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh....eeeeeeee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.eeee....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hdt A   9 NKNLIITIEREYGSGGRIVGKKLAEELGIHFYDDDILKLASEKSPENLFKFQSEVmRELAESEPCIFVGRAAGYVLDQDEDIERLIRIFVYTDKVKKVQRVmEVDCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSmKNYDLPINTTKLTLEETAELIKAYIRLKGFm 219
                                    18        28        38        48  ||   100     | 110       120       130       140       150 |     160       170       180       190       200       210        |
                                                                     51|         106-MSE                                       152-MSE                             188-MSE                        219-MSE
                                                                      94                                                                                                                             


Chain B from PDB  Type:PROTEIN  Length:169
                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee....hhhhhhhhhhhhhh.eeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.eeee.hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hdt B   9 NKNLIITIEREYGSGGRIVGKKLAEELGIHFYDDDILKLASEKSPENLFKFQSEVmRELAESEPCIFVGRAAGYVLDQDEDIERLIRIFVYTDKVKKVQRVmEVDCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSmKNYDLPINTTKLTLEETAELIKAYIRLKGFm 219
                                    18        28        38        48  ||   100     | 110       120       130       140       150 |     160       170       180       190       200       210        |
                                                                     51|         106-MSE                                       152-MSE                             188-MSE                        219-MSE
                                                                      94
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3HDT)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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