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(-) Description

Title :  CRYSTAL STRUCTURE OF E. COLI MCCB + SUCCINIMIDE
 
Authors :  C. A. Regni, R. F. Roush, D. Miller, A. Nourse, C. T. Walsh, B. A. Schulman
Date :  22 Apr 09  (Deposition) - 16 Jun 09  (Release) - 27 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Ubiquitin-Activating Enzyme, Microcin, Bacteriocin, Mcc7, Peptide Antibiotic, N-P Bond Formation, Antibiotic, Antimicrobial, Phosphoprotein, Transferase, Transferase-Antibiotic Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. A. Regni, R. F. Roush, D. J. Miller, A. Nourse, C. T. Walsh, B. A. Schulman
How The Mccb Bacterial Ancestor Of Ubiquitin E1 Initiates Biosynthesis Of The Microcin C7 Antibiotic.
Embo J. V. 28 1953 2009
PubMed-ID: 19494832  |  Reference-DOI: 10.1038/EMBOJ.2009.146

(-) Compounds

Molecule 1 - MCCB PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MCCB
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Strain: BM7006
 
Molecule 2 - MICROCIN C7 ANALOG
    Chains: E, F, G, H
    Engineered: YES
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Other Details: ASN 7 TO SNN, CYCLIZED ASPARAGINE
    Other Details - Source: MRTGNA-SUCCINIMIDE WAS SYNTHESIZED AS PREVIOUSLY DESCRIBED (NOVOA ET AL, 1986;
ROUSH ET AL, 2008).
    Synonym: MCCC7, MICROCIN C51, MCCC51, MICROCIN C, MCC
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric/Biological Unit (3, 8)
No.NameCountTypeFull Name
1SNN2Mod. Amino AcidL-3-AMINOSUCCINIMIDE
2SO42Ligand/IonSULFATE ION
3ZN4Ligand/IonZINC ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:257 , CYS A:260 , CYS A:343 , CYS A:346BINDING SITE FOR RESIDUE ZN A 500
02AC2SOFTWARECYS B:257 , CYS B:260 , CYS B:343 , CYS B:346BINDING SITE FOR RESIDUE ZN B 500
03AC3SOFTWARELYS B:278BINDING SITE FOR RESIDUE SO4 B 351
04AC4SOFTWARECYS C:257 , CYS C:260 , CYS C:343 , CYS C:346BINDING SITE FOR RESIDUE ZN C 500
05AC5SOFTWAREASN C:59 , ASN D:274 , LYS D:278BINDING SITE FOR RESIDUE SO4 C 351
06AC6SOFTWARECYS D:257 , CYS D:260 , CYS D:343 , CYS D:346BINDING SITE FOR RESIDUE ZN D 500
07AC7SOFTWAREILE A:126 , SER A:212 , ALA A:213 , ASP A:214 , ASN A:236 , ALA A:237 , GLY A:238 , TYR A:239 , VAL A:240 , VAL A:245 , ARG A:322 , GLY A:324 , GLN A:335 , HOH A:352 , HOH A:400 , LYS B:10 , LEU B:19 , GLU B:26 , HOH B:378 , HOH E:271BINDING SITE FOR CHAIN E OF MICROCIN C7 ANALOG
08AC8SOFTWARELYS A:10 , TYR A:14 , GLU A:26 , TYR A:28 , ILE B:126 , SER B:212 , ALA B:213 , ASP B:214 , ASN B:236 , ALA B:237 , GLY B:238 , TYR B:239 , VAL B:240 , VAL B:245 , PRO B:288 , ARG B:322 , GLY B:324 , TRP B:326 , HIS B:333 , GLN B:335 , HOH B:389 , HOH F:202 , HOH F:382 , HOH F:416BINDING SITE FOR CHAIN F OF MICROCIN C7 ANALOG
09AC9SOFTWAREARG C:322 , HIS C:333 , GLN C:335BINDING SITE FOR CHAIN G OF MICROCIN C7 ANALOG
10BC1SOFTWAREGLU C:26 , ARG D:322 , HIS D:333 , GLN D:335BINDING SITE FOR CHAIN H OF MICROCIN C7 ANALOG

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3H5R)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1His A:215 -Pro A:216
2Gly A:247 -Pro A:248
3His B:215 -Pro B:216
4Gly B:247 -Pro B:248
5His C:215 -Pro C:216
6Gly C:247 -Pro C:248
7His D:215 -Pro D:216
8Gly D:247 -Pro D:248

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3H5R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3H5R)

(-) Exons   (0, 0)

(no "Exon" information available for 3H5R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:340
 aligned with Q47506_ECOLX | Q47506 from UniProtKB/TrEMBL  Length:350

    Alignment length:348
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340        
         Q47506_ECOLX     1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCGN 348
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eee.....eeee..eeee......eee.hhhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhhhhhhhhhh..eee.hhhh.......hhhhhhhhhh..hhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh..eeeee......hhhhhh....hhhhh..hhhhhhhhhhhhhh...eeeee......hhhhhhh....eeee......hhhhhhhhhhhhhh..eeeeeee..eeeeeeee.............--------...................hhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3h5r A   1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKV--------KENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCGN 348
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  |      - |     280       290       300       310       320       330       340        
                                                                                                                                                                                                                                                                                                263      272                                                                            


Chain B from PDB  Type:PROTEIN  Length:334
 aligned with Q47506_ECOLX | Q47506 from UniProtKB/TrEMBL  Length:350

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
         Q47506_ECOLX     1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCG 347
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee..eeee......eee.hhhhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhh..eee.hhhh----..hhhhhhhhhh...hhhhhhhhhhh.eeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhh....hhhhh..hhhhhhhhhhhhhh...eeeee.....hhhhhhhh....eeee......hhhhhhhhhhhhhh..eeeeeee..eeeeeeee............---------hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh........eeeee......eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h5r B   1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNN----NRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQK---------KENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCG 347
                                    10        20        30        40        50        60        70        80    |   90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260 |       - |     280       290       300       310       320       330       340       
                                                                                                               85   90                                                                                                                                                                         262       272                                                                           


Chain C from PDB  Type:PROTEIN  Length:343
 aligned with Q47506_ECOLX | Q47506 from UniProtKB/TrEMBL  Length:350

    Alignment length:349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340         
         Q47506_ECOLX     1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCGNR 349
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.....eeee..eeee.hhhhheee.hhhhhhhhhhhhhhh...eehhhhhh....hhhhhhhhhhhhhhh..eee.hhhh......hhhhhhhhhhh..hhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh..eeeee.....hhhhhhh....hhhhh..hhhhhhhhhhhhhh...eeeee......hhhhhhh....eeee......hhhhhhhhhhhhh...eeeeeee..eeeeeeee.............------..hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h5r C   1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKV------SEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCGNR 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  |    270       280       290       300       310       320       330       340         
                                                                                                                                                                                                                                                                                                263    270                                                                               


Chain D from PDB  Type:PROTEIN  Length:333
 aligned with Q47506_ECOLX | Q47506 from UniProtKB/TrEMBL  Length:350

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
         Q47506_ECOLX     1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCG 347
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeee..eeee.hhhhheee.hhhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhhhhhhhhhh..eee.hhh.----..hhhhhhhhhhh..hhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh..eeeee.....hhhhhhh...........hhhhhhhhhhhhhh...eeeee.....hhhhhhhh....eeee......hhhhhhhhhhhhh...eeeeeee..eeeeeeee...........----------.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h5r D   1 MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSSYTAALETANIPEKDFSNCFRFLKENFFIIPGEYNN----NRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPGKTGCYECQ----------KENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCG 347
                                    10        20        30        40        50        60        70        80    |   90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260|        - |     280       290       300       310       320       330       340       
                                                                                                               85   90                                                                                                                                                                        261        272                                                                           


Chain E from PDB  Type:PROTEIN  Length:7
 aligned with MCCC7_ECOLX | Q47505 from UniProtKB/Swiss-Prot  Length:7

    Alignment length:7
          MCCC7_ECOLX     1 MRTGNAN   7
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                 3h5r E  71 MRTGNAd  77
                                  |
                                 77-SNN


Chain F from PDB  Type:PROTEIN  Length:7
 aligned with MCCC7_ECOLX | Q47505 from UniProtKB/Swiss-Prot  Length:7

    Alignment length:7
          MCCC7_ECOLX     1 MRTGNAN   7
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                 3h5r F  71 MRTGNAd  77
                                  |
                                 77-SNN


Chain G from PDB  Type:PROTEIN  Length:1
 aligned with MCCC7_ECOLX | Q47505 from UniProtKB/Swiss-Prot  Length:7

    Alignment length:1
          MCCC7_ECOLX     1 M   1
               SCOP domains - SCOP domains
               CATH domains - CATH domains
               Pfam domains - Pfam domains
         Sec.struct. author . Sec.struct. author
                 SAPs(SNPs) - SAPs(SNPs)
                    PROSITE - PROSITE
                 Transcript - Transcript
                 3h5r G  71 M  71


Chain H from PDB  Type:PROTEIN  Length:1
 aligned with MCCC7_ECOLX | Q47505 from UniProtKB/Swiss-Prot  Length:7

    Alignment length:1
          MCCC7_ECOLX     1 M   1
               SCOP domains - SCOP domains
               CATH domains - CATH domains
               Pfam domains - Pfam domains
         Sec.struct. author . Sec.struct. author
                 SAPs(SNPs) - SAPs(SNPs)
                    PROSITE - PROSITE
                 Transcript - Transcript
                 3h5r H  71 M  71
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3H5R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3H5R)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3H5R)

(-) Gene Ontology  (6, 7)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (Q47506_ECOLX | Q47506)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0008641    small protein activating enzyme activity    Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.

Chain E,F,G,H   (MCCC7_ECOLX | Q47505)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0042742    defense response to bacterium    Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

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  3h5r
    Family and Domain Information: ProDom | SYSTERS
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  MCCC7_ECOLX | Q47505
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  Q47506_ECOLX | Q47506
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    Protein Cavities: castP
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    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  MCCC7_ECOLX | Q47505
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q47506_ECOLX | Q47506
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MCCC7_ECOLX | Q47505: 3h9g 3h9j 3h9q
UniProtKB/TrEMBL
        Q47506_ECOLX | Q47506: 3h5a 3h5n 3h9g 3h9j 3h9q

(-) Related Entries Specified in the PDB File

3h5a E. COLI MCCB
3h5n E. COLI MCCB + ATP
3h9g E. COLI MCCB + MCCA-N7ISOASN
3h9j E. COLI MCCB + AMPCPP + SEMET MCCA
3h9q E. COLI MCCB + SEMET MCCA