Chain A from PDB Type:PROTEIN Length:204
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNR 220
SCOP domains d3guya_ A: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhh......eee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee...----------------..hhhhhhhhhhhhh.ee..eeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy A 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM----------------FMSAEDAALMIHGALANIGNGYVSDITVNR 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | - -| 200 210 220
174 191
Chain B from PDB Type:PROTEIN Length:204
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:221
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNRQ 221
SCOP domains d3guyb_ B: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhh....eeeeee....hhhhhhhhhhh.-....eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee...----------------..hhhhhhhhhhhhh.....eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy B 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM----------------FMSAEDAALMIHGALANIGNGYVSDITVNRE 221
10 20 30 40 50 60 | 70 80 90 100 110 120 130 140 150 160 170 | - -| 200 210 220
67 | 174 191
69
Chain C from PDB Type:PROTEIN Length:212
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:221
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNRQ 221
SCOP domains d3guyc_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhh.......eee....hhhhhhhhhhh......eeee.....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhh.---------....hhhhhhhhhhhhh.ee..eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy C 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW---------SSFMSAEDAALMIHGALANIGNGYVSDITVNRE 221
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 |- 190 200 210 220
179 189
Chain D from PDB Type:PROTEIN Length:220
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:222
221
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220|
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNRQ- -
SCOP domains d3guyd_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhh.......eee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhh........--....hhhhhhhhhhhhhh.....eeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3guy D 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSL--SSFMSAEDAALMIHGALANIGNGYVSDITVNREG 222
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 | 190 200 210 220
186 |
189
Chain E from PDB Type:PROTEIN Length:204
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNR 220
SCOP domains d3guye_ E: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhh....eeeeee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee...----------------..hhhhhhhhhhhhh.ee..ee..eeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy E 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM----------------FMSAEDAALMIHGALANIGNGYVSDITVNR 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | - -| 200 210 220
174 191
Chain F from PDB Type:PROTEIN Length:204
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNR 220
SCOP domains d3guyf_ F: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhh......eee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee...----------------..hhhhhhhhhhhhh.ee..ee..eeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy F 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM----------------FMSAEDAALMIHGALANIGNGYVSDITVNR 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | - -| 200 210 220
174 191
Chain G from PDB Type:PROTEIN Length:228
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:228
221
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220|
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNRQ------- -
SCOP domains d3guyg_ G: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eee....hhhhhhhhhhhhhh...eeeee.hhhhhhhhhh.......eee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee.hhhhh...eee........hhhhhhhhhhhhh.........eeeee......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3guy G 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREGHHHHHH 228
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
Chain H from PDB Type:PROTEIN Length:209
aligned with A6B7Q2_VIBPQ | A6B7Q2 from UniProtKB/TrEMBL Length:221
Alignment length:220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
A6B7Q2_VIBPQ 1 MIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRACDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGSLANIGNGYVSDITVNR 220
SCOP domains d3guyh_ H: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhh......eee....hhhhhhhhhhh......eeee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhh.-----------..hhhhhhhhhhhhh.ee..ee..eeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3guy H 1 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW-----------FMSAEDAALMIHGALANIGNGYVSDITVNR 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 |- -| 200 210 220
179 191
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |