3GES - JenaLib

Title :   CRYSTAL STRUCTURE OF THE GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-O-METHYLGUANINE

Authors :   S. D. Gilbert, R. T. Batey

Date :   26 Feb 09 (Deposition) - 23 Jun 09 (Release) - 23 Jun 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.15

Chains :   Asym./Biol. Unit : A

Keywords :   Riboswitch, Mrna, Guanine, Rna-Ligand Complex, Double Helix, Three-Way Junction, Base Triple (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. D. Gilbert, F. E. Reyes, A. L. Edwards, R. T. Batey
Adaptive Ligand Binding By The Purine Riboswitch In The Recognition Of Guanine And Adenine Analogs
Structure V. 17 857 2009
PubMed-ID: 19523903 | Reference-DOI: 10.1016/J.STR.2009.04.009
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 10)

Sites (10, 10)

Asymmetric Unit (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	A A:21 , U A:22 , U A:47 , U A:51 , A A:52 , A A:73 , U A:74 , U A:75 , HOH A:310	BINDING SITE FOR RESIDUE 6GO A 91
02	AC2	SOFTWARE	G A:32 , A A:33 , G A:38 , C A:39 , U A:67 , HOH A:328	BINDING SITE FOR RESIDUE ACT A 96
03	AC3	SOFTWARE	G A:27 , C A:28 , G A:29 , U A:30 , A A:66 , U A:67 , HOH A:410	BINDING SITE FOR RESIDUE NCO A 101
04	AC4	SOFTWARE	G A:38 , C A:39 , G A:56 , G A:57 , C A:58 , HOH A:333	BINDING SITE FOR RESIDUE NCO A 102
05	AC5	SOFTWARE	C A:39 , G A:55 , G A:56 , G A:57 , G A:68 , U A:69 , HOH A:339	BINDING SITE FOR RESIDUE NCO A 103
06	AC6	SOFTWARE	U A:30 , G A:31 , G A:32 , A A:65 , A A:66 , HOH A:305 , HOH A:312 , HOH A:328	BINDING SITE FOR RESIDUE NCO A 104
07	AC7	SOFTWARE	G A:37 , G A:38 , HOH A:365 , HOH A:396	BINDING SITE FOR RESIDUE NCO A 105
08	AC8	SOFTWARE	G A:46 , U A:47 , C A:50 , HOH A:382	BINDING SITE FOR RESIDUE NCO A 108
09	AC9	SOFTWARE	A A:24 , C A:71 , HOH A:307	BINDING SITE FOR RESIDUE NCO A 109
10	BC1	SOFTWARE	U A:36 , G A:42 , C A:43 , G A:72 , A A:73 , HOH A:353 , HOH A:356 , HOH A:413	BINDING SITE FOR RESIDUE NCO A 112

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:RNA  Length:67
                                                                                                  
                  3ges A 15 GGACAUAUAAUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC 81
                                    24        34        44        54        64        74

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Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (0, 0)

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