3FVI - JenaLib

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TYR A:28 , GLY A:30 , GLY A:32 , ASP A:49 , CL A:126	BINDING SITE FOR RESIDUE CA A 125
02	AC2	SOFTWARE	ASP A:49 , TYR A:69 , CA A:125	BINDING SITE FOR RESIDUE CL A 126
03	AC3	SOFTWARE	LEU A:2 , TRP A:3 , ASN A:23 , HIS B:17 , OSF B:128 , OSF C:127 , OSF D:130	BINDING SITE FOR RESIDUE OSF A 127
04	AC4	SOFTWARE	TYR B:28 , GLY B:30 , GLY B:32 , ASP B:49 , OSF B:127	BINDING SITE FOR RESIDUE CA B 125
05	AC5	SOFTWARE	ARG B:6 , HIS B:17 , PRO B:18 , LEU B:19 , MET B:20 , OSF B:128 , LEU C:64 , THR C:70	BINDING SITE FOR RESIDUE OSF B 126
06	AC6	SOFTWARE	LEU B:2 , PHE B:5 , ARG B:6 , LEU B:19 , PHE B:22 , TYR B:28 , CYS B:29 , GLY B:30 , CYS B:45 , HIS B:48 , ASP B:49 , TYR B:69 , CA B:125 , OSF D:128	BINDING SITE FOR RESIDUE OSF B 127
07	AC7	SOFTWARE	ARG A:6 , OSF A:127 , ARG B:6 , LYS B:10 , OSF B:126	BINDING SITE FOR RESIDUE OSF B 128
08	AC8	SOFTWARE	TYR C:28 , GLY C:30 , GLY C:32 , ASP C:49 , OSF C:128	BINDING SITE FOR RESIDUE CA C 125
09	AC9	SOFTWARE	LEU B:19 , ASN B:23 , PHE C:63 , LEU C:64 , VAL C:65 , LEU D:2 , TRP D:3 , ASN D:23	BINDING SITE FOR RESIDUE OSF C 126
10	BC1	SOFTWARE	TYR A:69 , THR A:70 , OSF A:127 , ARG C:6 , HIS C:17 , PRO C:18 , LEU C:19 , MET C:20 , HOH C:138	BINDING SITE FOR RESIDUE OSF C 127
11	BC2	SOFTWARE	PHE C:5 , ARG C:6 , PRO C:18 , LEU C:19 , TYR C:28 , CYS C:29 , GLY C:30 , HIS C:48 , TYR C:69 , CA C:125 , LEU D:64 , OSF D:130	BINDING SITE FOR RESIDUE OSF C 128
12	BC3	SOFTWARE	ASN C:24 , LEU C:31 , THR C:120 , LYS D:56 , ASN D:57 , ASP D:59 , CYS D:61 , LYS D:62	BINDING SITE FOR RESIDUE OSF C 129
13	BC4	SOFTWARE	TYR D:28 , GLY D:30 , GLY D:32 , ASP D:49 , OSF D:129	BINDING SITE FOR RESIDUE CA D 125
14	BC5	SOFTWARE	LYS C:56 , ASN C:67 , LYS D:56 , ASN D:67	BINDING SITE FOR RESIDUE CL D 127
15	BC6	SOFTWARE	ASN B:23 , ASN B:67 , TYR B:69 , OSF B:127 , ARG D:6 , HIS D:17 , PRO D:18 , LEU D:19 , MET D:20	BINDING SITE FOR RESIDUE OSF D 128
16	BC7	SOFTWARE	ARG D:6 , PRO D:18 , LEU D:19 , TYR D:28 , CYS D:29 , GLY D:30 , CYS D:45 , HIS D:48 , ASP D:49 , TYR D:69 , CA D:125	BINDING SITE FOR RESIDUE OSF D 129
17	BC8	SOFTWARE	OSF A:127 , LEU C:2 , TRP C:3 , LEU C:19 , ASN C:23 , OSF C:128 , PHE D:63 , LEU D:64 , VAL D:65	BINDING SITE FOR RESIDUE OSF D 130
18	BC9	SOFTWARE	LYS B:121 , LYS C:56 , ASN C:57 , LEU C:58 , ASP C:59 , CYS C:61 , LYS C:62 , ASN D:24 , LEU D:31 , THR D:120	BINDING SITE FOR RESIDUE OSF D 131

SS Bonds (28, 28)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 8)

Asymmetric Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PA2_HIS	PS00118	Phospholipase A2 histidine active site.	PA21B_PIG	66-73	4	A:44-51 B:44-51 C:44-51 D:44-51
2	PA2_ASP	PS00119	Phospholipase A2 aspartic acid active site.	PA21B_PIG	117-127	4	A:95-105 B:95-105 C:95-105 D:95-105

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PA2_HIS	PS00118	Phospholipase A2 histidine active site.	PA21B_PIG	66-73	1	A:44-51 - - -
2	PA2_ASP	PS00119	Phospholipase A2 aspartic acid active site.	PA21B_PIG	117-127	1	A:95-105 - - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PA2_HIS	PS00118	Phospholipase A2 histidine active site.	PA21B_PIG	66-73	1	- B:44-51 - -
2	PA2_ASP	PS00119	Phospholipase A2 aspartic acid active site.	PA21B_PIG	117-127	1	- B:95-105 - -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PA2_HIS	PS00118	Phospholipase A2 histidine active site.	PA21B_PIG	66-73	1	- - C:44-51 -
2	PA2_ASP	PS00119	Phospholipase A2 aspartic acid active site.	PA21B_PIG	117-127	1	- - C:95-105 -

Biological Unit 4 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PA2_HIS	PS00118	Phospholipase A2 histidine active site.	PA21B_PIG	66-73	1	- - - D:44-51
2	PA2_ASP	PS00119	Phospholipase A2 aspartic acid active site.	PA21B_PIG	117-127	1	- - - D:95-105

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:124
 aligned with PA21B_PIG | P00592 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:124
                                    32        42        52        62        72        82        92       102       112       122       132       142    
            PA21B_PIG    23 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 146
               SCOP domains d3fvia_ A: automated matches                                                                                                 SCOP domains
               CATH domains 3fviA00 A:1-124 Phospholipase A2                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhh....hhhhh...eee....eee....hhhhhhhhhhhhhhhhhhhhh..hhhhh..hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------PA2_HIS -------------------------------------------PA2_ASP    ------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fvi A   1 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Chain B from PDB  Type:PROTEIN  Length:124
 aligned with PA21B_PIG | P00592 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:124
                                    32        42        52        62        72        82        92       102       112       122       132       142    
            PA21B_PIG    23 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 146
               SCOP domains d3fvib_ B: automated matches                                                                                                 SCOP domains
               CATH domains 3fviB00 B:1-124 Phospholipase A2                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhh....hhhhh....eee..eee.....hhhhhhhhhhhhhhhhhhhh...hhhhh..hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------PA2_HIS -------------------------------------------PA2_ASP    ------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fvi B   1 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Chain C from PDB  Type:PROTEIN  Length:124
 aligned with PA21B_PIG | P00592 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:124
                                    32        42        52        62        72        82        92       102       112       122       132       142    
            PA21B_PIG    23 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 146
               SCOP domains d3fvic_ C: automated matches                                                                                                 SCOP domains
               CATH domains 3fviC00 C:1-124 Phospholipase A2                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhh................hhhhhhhhhhhhhhhhhhhh....hhhhh.......eeee..eeee....hhhhhhhhhhhhhhhhhhh....hhhhh..hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------PA2_HIS -------------------------------------------PA2_ASP    ------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fvi C   1 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Chain D from PDB  Type:PROTEIN  Length:124
 aligned with PA21B_PIG | P00592 from UniProtKB/Swiss-Prot  Length:146

    Alignment length:124
                                    32        42        52        62        72        82        92       102       112       122       132       142    
            PA21B_PIG    23 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 146
               SCOP domains d3fvid_ D: automated matches                                                                                                 SCOP domains
               CATH domains 3fviD00 D:1-124 Phospholipase A2                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhh...............hhhhhhhhhhhhhhhhhhhh....hhhhh.......eee....eee....hhhhhhhhhhhhhhhhhhhhh..hhhhh..hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------PA2_HIS -------------------------------------------PA2_ASP    ------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fvi D   1 ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (1, 4)

Pfam Domains (0, 0)

Gene Ontology (28, 28)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (PA21B_PIG | P00592)

molecular function
	GO:0032052	bile acid binding	Interacting selectively and non-covalently with bile acids, any of a group of steroid carboxylic acids occurring in bile.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004623	phospholipase A2 activity	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate.
	GO:0005102	receptor binding	Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
	GO:0000187	activation of MAPK activity	The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
	GO:0050482	arachidonic acid secretion	The controlled release of arachidonic acid from a cell or a tissue.
	GO:0032869	cellular response to insulin stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.
	GO:0006633	fatty acid biosynthetic process	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
	GO:0015758	glucose transport	The directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0032612	interleukin-1 production	The appearance of interleukin-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.
	GO:0032637	interleukin-8 production	The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.
	GO:0035556	intracellular signal transduction	The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
	GO:0019370	leukotriene biosynthetic process	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.
	GO:0016042	lipid catabolic process	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0030593	neutrophil chemotaxis	The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
	GO:0002446	neutrophil mediated immunity	Any process involved in the carrying out of an immune response by a neutrophil.
	GO:0045740	positive regulation of DNA replication	Any process that activates or increases the frequency, rate or extent of DNA replication.
	GO:0051092	positive regulation of NF-kappaB transcription factor activity	Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB.
	GO:0010524	positive regulation of calcium ion transport into cytosol	Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components.
	GO:0048146	positive regulation of fibroblast proliferation	Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells.
	GO:0050778	positive regulation of immune response	Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.
	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
cellular component
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

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	3fvi
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	3.1.1.4
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 19)

Sites (18, 18)