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(-) Description

Title :  CRYSTAL STRUCTURE OF MMUTATOR MUTT PROTEIN FROM BACILLUS HALODURANS
 
Authors :  J. B. Bonanno, J. Freeman, K. T. Bain, S. Hu, R. Romero, S. Wasserman, J. M. Sauder, S. K. Burley, S. C. Almo, New York Sgx Research Center For Structural Genomics (Nysgxrc)
Date :  16 Dec 08  (Deposition) - 13 Jan 09  (Release) - 13 Jan 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Hydrolase, Psi-2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. B. Bonanno, J. Freeman, K. T. Bain, S. Hu, R. Romero, S. Wasserman, J. M. Sauder, S. K. Burley, S. C. Almo
Crystal Structure Of Mmutator Mutt Protein From Bacillus Halodurans
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MUTATOR MUTT PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MODIFIED PET26
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BH3570
    Organism Scientific: BACILLUS HALODURANS
    Organism Taxid: 86665

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3FK9)

(-) Sites  (0, 0)

(no "Site" information available for 3FK9)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3FK9)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Asp A:150 -Pro A:151
2Asp B:150 -Pro B:151

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3FK9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3FK9)

(-) Exons   (0, 0)

(no "Exon" information available for 3FK9)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:153
 aligned with Q9K704_BACHD | Q9K704 from UniProtKB/TrEMBL  Length:159

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9K704_BACHD     1 MQRVTNCIVVDHDQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDRLLYGTFHYTPDFELLSYRLDPEP 153
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeee......ee..eee.....hhhhhhhhhhhhhhh.ee...eeeeeeeeeeee..eeeeeeeeeeeee..ee.....ee..eeeeeee.hhhhhh..hhhhhhhhhhhh.....eeeeeee.....eeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fk9 A   1 LQRVTNCIVVDHDQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDRLLYGTFHYTPDFELLSYRLDPEP 153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   


Chain B from PDB  Type:PROTEIN  Length:153
 aligned with Q9K704_BACHD | Q9K704 from UniProtKB/TrEMBL  Length:159

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9K704_BACHD     1 MQRVTNCIVVDHDQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDRLLYGTFHYTPDFELLSYRLDPEP 153
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeee......ee..eee.....hhhhhhhhhhhhhhh.ee...eeeeeeeeeeee..eeeeeeeeeeeee..ee..........eeeeee.hhhhhh..hhhhhhhhhhhh.....eeeeeee.....eeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fk9 B   1 LQRVTNCIVVDHDQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDRLLYGTFHYTPDFELLSYRLDPEP 153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3FK9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3FK9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3FK9)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (Q9K704_BACHD | Q9K704)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

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  Cis Peptide Bonds
    Asp A:150 - Pro A:151   [ RasMol ]  
    Asp B:150 - Pro B:151   [ RasMol ]  
 

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