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(-) Description

Title :  CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF A CHITOBIASE (BF3579) FROM BACTEROIDES FRAGILIS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BFR260B
 
Authors :  F. Forouhar, S. Lew, J. Seetharaman, H. Janjua, R. Xiao, E. L. Foote, C. Ciccosanti, D. Lee, R. Nair, J. K. Everett, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomic Consortium (Nesg)
Date :  30 Oct 08  (Deposition) - 18 Nov 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym./Biol. Unit :  A
Keywords :  The Present C-Terminal Domain Is Predominantly Composed Of Beta Strands. , Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, S. Lew, J. Seetharaman, H. Janjua, R. Xiao, E. L. Foote, C. Ciccosanti, D. Lee, R. Nair, J. K. Everett, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The C-Terminal Domain Of A Chitobiase (Bf3579) From Bacteroides Fragilis, Northeast Structural Genomics Consortium Target Bfr260B
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN BF3579
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: C-TERMINAL DOMAIN, RESIDUES 291-440
    Gene: BF3579
    Organism Scientific: BACTEROIDES FRAGILIS
    Organism Taxid: 272559
    Strain: NCTC 9343

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:342 -Pro A:343

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:149
 aligned with Q5L9G5_BACFN | Q5L9G5 from UniProtKB/TrEMBL  Length:440

    Alignment length:149
                                   301       311       321       331       341       351       361       371       381       391       401       411       421       431         
         Q5L9G5_BACFN   292 DKLSKTDWKIVSFTTEEASGEGSNNGHAKHLIDGNIETFWHSRWQGGSDPLPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEASEDGTNWESIGQFGFTNQDAALKYYVKSSTARYIKLVIPDGVGNGTVAAIRELDVRGTVVN 440
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee.............hhhhhh.......ee...........eeeeeeeeeeeeeeeeeeee..........eeeeeee......eeeeeee.......eee....eeeeeeeeee..........eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3f2z A 292 DKLSKTDWKIVSFTTEEASGEGSNNGHAKHLIDGNIETFWHSRWQGGSDPLPYEIIIDmNHRVKIAQIELLPRGRGSNNPIKVVRFEASEDGTNWESIGQFGFTNQDAALKYYVKSSTARYIKLVIPDGVGNGTVAAIRELDVRGTVVN 440
                                   301       311       321       331       341       351       361       371       381       391       401       411       421       431         
                                                                                    350-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3F2Z)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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    Leu A:342 - Pro A:343   [ RasMol ]  
 

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