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(-) Description

Title :  CRYSTAL STRUCTURE OF P450BIOI IN COMPLEX WITH OCTADEC-9Z-ENOIC ACID LIGATED ACYL CARRIER PROTEIN
 
Authors :  M. J. Cryle, I. Schlichting
Date :  18 Sep 08  (Deposition) - 07 Oct 08  (Release) - 08 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Protein-Protein Complex, Cytochrome P450 Fold, Carrier Protein, 4- Helix Bundle, Fatty Acid Biosynthesis, Lipid Synthesis, Phosphopantetheine, Biotin Biosynthesis, Heme, Iron, Metal-Binding, Monooxygenase, Oxidoreductase, Oxidoreductase-Lipid Transport Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. J. Cryle, I. Schlichting
Structural Insights From A P450 Carrier Protein Complex Reveal How Specificity Is Achieved In The P450(Bioi) Acp Complex.
Proc. Natl. Acad. Sci. Usa V. 105 15696 2008
PubMed-ID: 18838690  |  Reference-DOI: 10.1073/PNAS.0805983105

(-) Compounds

Molecule 1 - ACYL CARRIER PROTEIN
    ChainsA, C, E, G
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A(+)
    Expression System StrainC41(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneACPP, B1094, JW1080
    Organism ScientificESCHERICHIA COLI
    Organism Taxid83333
    StrainK-12
    SynonymACP, CYTOSOLIC-ACTIVATING FACTOR, CAF, FATTY ACID SYNTHASE ACYL CARRIER PROTEIN
 
Molecule 2 - BIOTIN BIOSYNTHESIS CYTOCHROME P450-LIKE ENZYME
    ChainsB, D, F, H
    EC Number1.14.-.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET24B(+)
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneBIOI, CYP107H, BSU30190
    Organism ScientificBACILLUS SUBTILIS
    Organism Taxid1423
    StrainGP208

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)AB      
Biological Unit 2 (1x)  CD    
Biological Unit 3 (1x)    EF  
Biological Unit 4 (1x)      GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 15)

Asymmetric Unit (3, 15)
No.NameCountTypeFull Name
1HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2HTG7Ligand/IonHEPTYL 1-THIOHEXOPYRANOSIDE
3ZMO4Ligand/IonS-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] (9Z)-OCTADEC-9-ENETHIOATE
Biological Unit 1 (3, 4)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2HTG2Ligand/IonHEPTYL 1-THIOHEXOPYRANOSIDE
3ZMO1Ligand/IonS-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] (9Z)-OCTADEC-9-ENETHIOATE
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2HTG2Ligand/IonHEPTYL 1-THIOHEXOPYRANOSIDE
3ZMO1Ligand/IonS-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] (9Z)-OCTADEC-9-ENETHIOATE
Biological Unit 3 (3, 3)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2HTG1Ligand/IonHEPTYL 1-THIOHEXOPYRANOSIDE
3ZMO1Ligand/IonS-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] (9Z)-OCTADEC-9-ENETHIOATE
Biological Unit 4 (3, 4)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
2HTG2Ligand/IonHEPTYL 1-THIOHEXOPYRANOSIDE
3ZMO1Ligand/IonS-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] (9Z)-OCTADEC-9-ENETHIOATE

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:56 , HOH A:102 , HOH A:103 , HOH A:104 , HOH A:107 , HOH A:110 , HOH A:119 , HOH A:125 , TYR B:36 , ARG B:59 , THR B:60 , PRO B:61 , LEU B:62 , PRO B:63 , ILE B:168 , PHE B:170 , ARG B:172 , ILE B:233 , ALA B:234 , THR B:281 , MET B:283 , THR B:284 , ALA B:285 , GLN B:304 , TYR B:306 , HEM B:405 , HOH B:436BINDING SITE FOR RESIDUE ZMO A 99
02AC2SOFTWAREPHE A:48 , THR A:59 , VAL A:63 , ALA A:79 , GLU A:80 , ILE A:82 , THR A:83 , HOH A:120BINDING SITE FOR RESIDUE HTG A 100
03AC3SOFTWAREZMO A:99 , MET B:80 , LEU B:81 , HIS B:88 , ARG B:92 , LEU B:231 , ALA B:234 , GLY B:235 , THR B:238 , THR B:239 , LEU B:275 , PRO B:280 , THR B:281 , THR B:284 , ARG B:286 , LEU B:309 , SER B:336 , PHE B:337 , GLY B:338 , HIS B:342 , CYS B:344 , LEU B:345 , LEU B:349 , HOH B:427 , HOH B:448BINDING SITE FOR RESIDUE HEM B 405
04AC4SOFTWAREHOH A:137 , LYS B:30 , GLY B:31 , PRO B:37 , GLY B:38 , TRP B:39 , GLU B:303BINDING SITE FOR RESIDUE HTG B 417
05AC5SOFTWARESER C:56 , HOH C:103 , HOH C:106 , HOH C:133 , HOH C:134 , TYR D:36 , ARG D:59 , THR D:60 , PRO D:61 , PRO D:63 , MET D:79 , LEU D:164 , ILE D:165 , THR D:167 , ILE D:168 , PHE D:170 , ARG D:172 , MET D:283 , THR D:284 , TYR D:306 , HEM D:405 , HOH D:491BINDING SITE FOR RESIDUE ZMO C 99
06AC6SOFTWAREPHE C:48 , THR C:59 , VAL C:60 , ALA C:79 , GLU C:80 , ILE C:82 , HOH D:477BINDING SITE FOR RESIDUE HTG C 100
07AC7SOFTWAREZMO C:99 , MET D:80 , LEU D:81 , HIS D:88 , ARG D:92 , PHE D:99 , ILE D:143 , LEU D:231 , ALA D:234 , THR D:238 , THR D:239 , LEU D:242 , THR D:281 , THR D:284 , ARG D:286 , SER D:336 , PHE D:337 , GLY D:338 , HIS D:341 , HIS D:342 , CYS D:344 , LEU D:345 , GLY D:346 , ALA D:350 , HOH D:432 , HOH D:447 , HOH D:474BINDING SITE FOR RESIDUE HEM D 405
08AC8SOFTWAREALA D:7 , SER D:8 , PHE D:11 , PHE D:18 , PHE D:381 , ASN G:45BINDING SITE FOR RESIDUE HTG D 417
09AC9SOFTWARESER E:56 , HOH E:101 , HOH E:107 , HOH E:109 , HOH E:111 , HOH E:125 , HOH E:126 , HOH E:145 , TYR F:36 , ARG F:59 , THR F:60 , PRO F:61 , LEU F:62 , PRO F:63 , LEU F:164 , ILE F:168 , PHE F:170 , ARG F:172 , ILE F:233 , MET F:283 , GLN F:304 , TYR F:306 , HEM F:405 , HOH F:549BINDING SITE FOR RESIDUE ZMO E 99
10BC1SOFTWAREPHE E:48 , THR E:59 , VAL E:60 , ALA E:79 , GLU E:80 , ILE E:82 , THR E:83 , HOH E:114 , HOH E:115BINDING SITE FOR RESIDUE HTG E 100
11BC2SOFTWAREZMO E:99 , MET F:80 , LEU F:81 , HIS F:88 , ARG F:92 , PHE F:99 , ILE F:143 , LEU F:231 , ALA F:234 , THR F:238 , THR F:239 , LEU F:242 , PRO F:280 , THR F:281 , THR F:284 , ARG F:286 , LEU F:309 , SER F:336 , PHE F:337 , GLY F:338 , HIS F:342 , CYS F:344 , HOH F:417 , HOH F:434BINDING SITE FOR RESIDUE HEM F 405
12BC3SOFTWARESER G:56 , HOH G:103 , HOH G:124 , HOH G:129 , TYR H:36 , ARG H:59 , THR H:60 , PRO H:61 , PRO H:63 , LEU H:164 , THR H:167 , ILE H:168 , PHE H:170 , ARG H:172 , ALA H:234 , THR H:281 , MET H:283 , THR H:284 , TYR H:306 , HEM H:405 , HOH H:497BINDING SITE FOR RESIDUE ZMO G 99
13BC4SOFTWAREPHE G:48 , THR G:59 , ALA G:79 , GLU G:80 , ILE G:82BINDING SITE FOR RESIDUE HTG G 100
14BC5SOFTWAREZMO G:99 , MET H:80 , LEU H:81 , HIS H:88 , ARG H:92 , PHE H:99 , ALA H:234 , GLY H:235 , THR H:238 , THR H:239 , LEU H:275 , PRO H:280 , THR H:281 , THR H:284 , ARG H:286 , LEU H:309 , SER H:336 , PHE H:337 , GLY H:338 , HIS H:342 , CYS H:344 , GLY H:346 , HOH H:427 , HOH H:438BINDING SITE FOR RESIDUE HEM H 405
15BC6SOFTWAREASN C:45 , PHE H:11 , PHE H:18BINDING SITE FOR RESIDUE HTG H 417

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EJE)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Gln B:85 -Pro B:86
2Ser B:330 -Pro B:331
3Gln D:85 -Pro D:86
4Ser D:330 -Pro D:331
5Gln F:85 -Pro F:86
6Ser F:330 -Pro F:331
7Gln H:85 -Pro H:86
8Ser H:330 -Pro H:331

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3EJE)

(-) PROSITE Motifs  (3, 12)

Asymmetric Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARRIERPS50075 Carrier protein (CP) domain profile.ACP_ECOLI2-77
 
 
 
  4A:21-95
C:21-95
E:21-93
G:21-92
2PHOSPHOPANTETHEINEPS00012 Phosphopantetheine attachment site.ACP_ECOLI32-47
 
 
 
  4A:51-66
C:51-66
E:51-66
G:51-66
3CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.BIOI_BACSU338-347
 
 
 
  4B:337-346
D:337-346
F:337-346
H:337-346
Biological Unit 1 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARRIERPS50075 Carrier protein (CP) domain profile.ACP_ECOLI2-77
 
 
 
  1A:21-95
-
-
-
2PHOSPHOPANTETHEINEPS00012 Phosphopantetheine attachment site.ACP_ECOLI32-47
 
 
 
  1A:51-66
-
-
-
3CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.BIOI_BACSU338-347
 
 
 
  1B:337-346
-
-
-
Biological Unit 2 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARRIERPS50075 Carrier protein (CP) domain profile.ACP_ECOLI2-77
 
 
 
  1-
C:21-95
-
-
2PHOSPHOPANTETHEINEPS00012 Phosphopantetheine attachment site.ACP_ECOLI32-47
 
 
 
  1-
C:51-66
-
-
3CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.BIOI_BACSU338-347
 
 
 
  1-
D:337-346
-
-
Biological Unit 3 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARRIERPS50075 Carrier protein (CP) domain profile.ACP_ECOLI2-77
 
 
 
  1-
-
E:21-93
-
2PHOSPHOPANTETHEINEPS00012 Phosphopantetheine attachment site.ACP_ECOLI32-47
 
 
 
  1-
-
E:51-66
-
3CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.BIOI_BACSU338-347
 
 
 
  1-
-
F:337-346
-
Biological Unit 4 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARRIERPS50075 Carrier protein (CP) domain profile.ACP_ECOLI2-77
 
 
 
  1-
-
-
G:21-92
2PHOSPHOPANTETHEINEPS00012 Phosphopantetheine attachment site.ACP_ECOLI32-47
 
 
 
  1-
-
-
G:51-66
3CYTOCHROME_P450PS00086 Cytochrome P450 cysteine heme-iron ligand signature.BIOI_BACSU338-347
 
 
 
  1-
-
-
H:337-346

(-) Exons   (0, 0)

(no "Exon" information available for 3EJE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:78
 aligned with ACP_ECOLI | P0A6A8 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
            ACP_ECOLI     - --MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH  76
               SCOP domains d3ejea_ A: Acyl carrier protein                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh....................hhhhhhhhhhhhhh....hhhhhhhh.hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---CARRIER  PDB: A:21-95 UniProt: 2-77                                         PROSITE (1)
                PROSITE (2) ---------------------------------PHOSPHOPANTETHEI----------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------ Transcript
                 3eje A  18 SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH  95
                                    27        37        47        57        67        77        87        

Chain B from PDB  Type:PROTEIN  Length:378
 aligned with BIOI_BACSU | P53554 from UniProtKB/Swiss-Prot  Length:395

    Alignment length:386
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389      
           BIOI_BACSU    10 SEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRYRPLFGFRALEELPVTFE 395
               SCOP domains d3ejeb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhhh..ee...........hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh-----..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh....eeeeee...eee..eee....eeeeehhhhh.........................hhhhh..hhhhhhhhhhhhhhhhhhhh...ee.---...............eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eje B   9 SEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLK-----KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLA---WRYRPLFGFRALEELPVTFE 394
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208   |   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368  |   |378       388      
                                                                                                                                                                                                                                     212   218                                                                                                                                                      371 375                   

Chain C from PDB  Type:PROTEIN  Length:78
 aligned with ACP_ECOLI | P0A6A8 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
            ACP_ECOLI     - --MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH  76
               SCOP domains d3ejec_ C: Acyl carrier protein                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh....................hhhhhhhhhhhhhh....hhhhhhhh.hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ---CARRIER  PDB: C:21-95 UniProt: 2-77                                         PROSITE (1)
                PROSITE (2) ---------------------------------PHOSPHOPANTETHEI----------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------ Transcript
                 3eje C  18 SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH  95
                                    27        37        47        57        67        77        87        

Chain D from PDB  Type:PROTEIN  Length:385
 aligned with BIOI_BACSU | P53554 from UniProtKB/Swiss-Prot  Length:395

    Alignment length:389
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386         
           BIOI_BACSU     7 TASSEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRYRPLFGFRALEELPVTFE 395
               SCOP domains d3ejed_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhhh..ee...........hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh.---..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh....eeeeee...eee..eee....eeeeehhhhh.........................hhhhh..hhhhhhhhhhhhhhhhhhhh...ee...-...............eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eje D   6 TASSEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGR---KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF-WRYRPLFGFRALEELPVTFE 394
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205        |-  |    225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385         
                                                                                                                                                                                                                                          214 218                                                                                                                                                        373 |                   
                                                                                                                                                                                                                                                                                                                                                                                                           375                   

Chain E from PDB  Type:PROTEIN  Length:76
 aligned with ACP_ECOLI | P0A6A8 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:76
                              1                                                                         
                              |      8        18        28        38        48        58        68      
            ACP_ECOLI     - --MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN  74
               SCOP domains d3ejee_ E: Acyl carrier protein                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh....................hhhhhhhhhhhhhh....hhhhhh...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---CARRIER  PDB: E:21-93 UniProt: 2-77                                       PROSITE (1)
                PROSITE (2) ---------------------------------PHOSPHOPANTETHEI--------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------- Transcript
                 3eje E  18 SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN  93
                                    27        37        47        57        67        77        87      

Chain F from PDB  Type:PROTEIN  Length:380
 aligned with BIOI_BACSU | P53554 from UniProtKB/Swiss-Prot  Length:395

    Alignment length:386
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389      
           BIOI_BACSU    10 SEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRYRPLFGFRALEELPVTFE 395
               SCOP domains d3ejef_ F: automated matches                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhhh..ee...........hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh-----..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh....eeeeee...eee..eee....eeeeehhhhh.........................hhhhh..hhhhhhhhhhhhhhhhhhhh...ee..-................eee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eje F   9 SEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLK-----KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLAD-EWRYRPLFGFRALEELPVTFE 394
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208   |   218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368   | | 378       388      
                                                                                                                                                                                                                                     212   218                                                                                                                                                       372 |                    
                                                                                                                                                                                                                                                                                                                                                                                                       374                    

Chain G from PDB  Type:PROTEIN  Length:75
 aligned with ACP_ECOLI | P0A6A8 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:75
                              1                                                                        
                              |      8        18        28        38        48        58        68     
            ACP_ECOLI     - --MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYI  73
               SCOP domains d3ejeg_ G: Acyl carrier protein                                             SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh....................hhhhhhhhhhhhhh....hhhhhhhh.hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---CARRIER  PDB: G:21-92 UniProt: 2-77                                      PROSITE (1)
                PROSITE (2) ---------------------------------PHOSPHOPANTETHEI-------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------- Transcript
                 3eje G  18 SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYI  92
                                    27        37        47        57        67        77        87     

Chain H from PDB  Type:PROTEIN  Length:383
 aligned with BIOI_BACSU | P53554 from UniProtKB/Swiss-Prot  Length:395

    Alignment length:389
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386         
           BIOI_BACSU     7 TASSEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRYRPLFGFRALEELPVTFE 395
               SCOP domains d3ejeh_ H: automated matches                                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhhh..ee...........hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh---....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh....eeeeee...eee..eee....eeeeehhhhh.........................hhhhh..hhhhhhhhhhhhhhhhhhhh...ee.---...............eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTOCHROME------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eje H   6 TASSEFLKNPYSFYDTLRAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLK---KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLA---WRYRPLFGFRALEELPVTFE 394
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205      |  -|      225       235       245       255       265       275       285       295       305       315       325       335       345       355       365     | 375       385         
                                                                                                                                                                                                                                        212 216                                                                                                                                                        371 375                   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EJE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EJE)

(-) Gene Ontology  (20, 20)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (ACP_ECOLI | P0A6A8)
molecular function
    GO:0000036    ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process    Interacting selectively and non-covalently with the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP) as part of the process of fatty acid biosynthesis.
    GO:0000035    acyl binding    Interacting selectively and non-covalently with an acyl group, any group formally derived by removal of the hydroxyl group from the acid function of a carboxylic acid.
    GO:0031177    phosphopantetheine binding    Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0006633    fatty acid biosynthetic process    The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
    GO:0006631    fatty acid metabolic process    The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
    GO:0009245    lipid A biosynthetic process    The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.
    GO:0008610    lipid biosynthetic process    The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0042493    response to drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (BIOI_BACSU | P53554)
molecular function
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0005506    iron ion binding    Interacting selectively and non-covalently with iron (Fe) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016705    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen    Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
biological process
    GO:0009102    biotin biosynthetic process    The chemical reactions and pathways resulting in the formation of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACP_ECOLI | P0A6A81acp 1l0h 1l0i 1t8k 2fac 2fad 2fae 2fhs 2k92 2k93 2k94 3ejb 3ejd 3ny7 5usr
        BIOI_BACSU | P535543ejb 3ejd

(-) Related Entries Specified in the PDB File

3ejb 3ejd