Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  E. COLI (LACZ) BETA-GALACTOSIDASE (H418E)
 
Authors :  D. H. Juers, R. E. Huber, B. W. Matthews
Date :  28 Jul 08  (Deposition) - 28 Oct 08  (Release) - 09 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Beta-Galactosidase, Glycosidase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. H. Juers, B. Rob, M. L. Dugdale, N. Rahimzadeh, C. Giang, M. Lee, B. W. Matthews, R. E. Huber
Direct And Indirect Roles Of His-418 In Metal Binding And In The Activity Of Beta-Galactosidase (E. Coli).
Protein Sci. V. 18 1281 2009
PubMed-ID: 19472413  |  Reference-DOI: 10.1002/PRO.140
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BETA-GALACTOSIDASE
    Chains: A, B, C, D
    EC Number: 3.2.1.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: JM109
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LACZ, B0344, JW0335
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI K12
    Organism Taxid: 83333

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 108)

Asymmetric/Biological Unit (3, 108)
No.NameCountTypeFull Name
1DMS82Ligand/IonDIMETHYL SULFOXIDE
2MG10Ligand/IonMAGNESIUM ION
3NA16Ligand/IonSODIUM ION

(-) Sites  (108, 108)

Asymmetric Unit (108, 108)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREGLU A:416 , GLU A:418 , GLU A:461 , HOH A:4014 , HOH A:4077 , HOH A:4153BINDING SITE FOR RESIDUE MG A3001
002AC2SOFTWAREASP A:15 , ASN A:18 , VAL A:21 , GLN A:163 , ASP A:193BINDING SITE FOR RESIDUE MG A3002
003AC3SOFTWAREHOH A:4573 , HOH A:4716 , HOH A:4767 , DMS A:8406 , ASP D:130BINDING SITE FOR RESIDUE MG A3005
004AC4SOFTWARETYR A:100 , ASP A:201 , PHE A:601 , ASN A:604 , HOH A:4167 , HOH A:4273BINDING SITE FOR RESIDUE NA A3101
005AC5SOFTWAREPHE A:556 , TYR A:559 , PRO A:560 , LEU A:562 , HOH A:4384 , HOH A:4556BINDING SITE FOR RESIDUE NA A3102
006AC6SOFTWAREPHE A:931 , PRO A:932 , LEU A:967 , THR A:970 , HOH A:4203 , HOH A:4631BINDING SITE FOR RESIDUE NA A3103
007AC7SOFTWARESER A:647 , GLU A:650 , LEU A:670 , DMS A:8425BINDING SITE FOR RESIDUE NA A3104
008AC8SOFTWAREHOH D:4002 , HOH D:4618 , HOH D:4749 , HOH D:4754 , HOH D:4755 , HOH D:4810BINDING SITE FOR RESIDUE MG A3105
009AC9SOFTWAREGLU B:416 , GLU B:418 , GLU B:461 , HOH B:4027 , HOH B:4091 , HOH B:4168BINDING SITE FOR RESIDUE MG B3001
010BC1SOFTWAREASP B:15 , ASN B:18 , VAL B:21 , GLN B:163 , ASP B:193BINDING SITE FOR RESIDUE MG B3002
011BC2SOFTWARETYR B:100 , ASP B:201 , PHE B:601 , ASN B:604 , HOH B:4182 , HOH B:4284BINDING SITE FOR RESIDUE NA B3101
012BC3SOFTWAREPHE B:556 , TYR B:559 , PRO B:560 , LEU B:562 , HOH B:4404 , HOH B:4587BINDING SITE FOR RESIDUE NA B3102
013BC4SOFTWAREPHE B:931 , PRO B:932 , LEU B:967 , THR B:970 , HOH B:4218 , HOH B:4659BINDING SITE FOR RESIDUE NA B3103
014BC5SOFTWARESER B:647 , GLU B:650 , LEU B:670 , HOH B:4671 , DMS B:8425BINDING SITE FOR RESIDUE NA B3104
015BC6SOFTWAREGLU C:416 , GLU C:418 , GLU C:461 , HOH C:4034 , HOH C:4098 , HOH C:4176BINDING SITE FOR RESIDUE MG C3001
016BC7SOFTWAREASP C:15 , ASN C:18 , VAL C:21 , GLN C:163 , ASP C:193BINDING SITE FOR RESIDUE MG C3002
017BC8SOFTWAREASP C:201 , PHE C:601 , ASN C:604 , HOH C:4190 , HOH C:4289BINDING SITE FOR RESIDUE NA C3101
018BC9SOFTWAREPHE C:556 , TYR C:559 , PRO C:560 , LEU C:562 , HOH C:4401 , HOH C:4575BINDING SITE FOR RESIDUE NA C3102
019CC1SOFTWAREPHE C:931 , PRO C:932 , LEU C:967 , THR C:970 , HOH C:4227BINDING SITE FOR RESIDUE NA C3103
020CC2SOFTWARESER C:647 , GLU C:650 , LEU C:670 , DMS C:8425BINDING SITE FOR RESIDUE NA C3104
021CC3SOFTWAREGLU D:416 , GLU D:418 , GLU D:461 , HOH D:4050 , HOH D:4114 , HOH D:4191BINDING SITE FOR RESIDUE MG D3001
022CC4SOFTWAREASP D:15 , ASN D:18 , VAL D:21 , GLN D:163 , ASP D:193BINDING SITE FOR RESIDUE MG D3002
023CC5SOFTWARETYR D:100 , ASP D:201 , PHE D:601 , ASN D:604 , HOH D:4205 , HOH D:4307BINDING SITE FOR RESIDUE NA D3101
024CC6SOFTWAREPHE D:556 , TYR D:559 , PRO D:560 , LEU D:562 , HOH D:4426 , HOH D:4603BINDING SITE FOR RESIDUE NA D3102
025CC7SOFTWAREPHE D:931 , PRO D:932 , LEU D:967 , MET D:968 , THR D:970 , HOH D:4239BINDING SITE FOR RESIDUE NA D3103
026CC8SOFTWARESER D:647 , GLU D:650 , LEU D:670 , DMS D:8425BINDING SITE FOR RESIDUE NA D3104
027CC9SOFTWARETHR A:229 , GLY A:331 , ASN A:449 , ARG A:482 , HOH A:4011BINDING SITE FOR RESIDUE DMS A8401
028DC1SOFTWAREARG A:557 , HIS A:622 , GLN A:623 , GLN A:625 , GLN A:628 , HOH A:4201BINDING SITE FOR RESIDUE DMS A8402
029DC2SOFTWARELYS A:380 , ASN A:383 , PHE A:626 , TYR A:642 , TRP A:708 , HOH A:4076 , HOH A:4210 , HOH A:4293BINDING SITE FOR RESIDUE DMS A8403
030DC3SOFTWAREPRO A:32 , PHE A:33 , TRP A:36 , ALA A:327 , HOH A:4344 , HOH A:4395 , HOH A:4564BINDING SITE FOR RESIDUE DMS A8404
031DC4SOFTWARETHR A:271 , LEU A:291 , ARG A:292BINDING SITE FOR RESIDUE DMS A8405
032DC5SOFTWAREGLU A:314 , HIS A:316 , GLY A:320 , LEU A:322 , MG A:3005 , HOH A:4716BINDING SITE FOR RESIDUE DMS A8406
033DC6SOFTWARELEU A:54 , ASN A:55 , HOH A:4632BINDING SITE FOR RESIDUE DMS A8408
034DC7SOFTWAREGLU A:334 , VAL A:335 , PRO A:480 , HOH A:4205 , HOH A:4330BINDING SITE FOR RESIDUE DMS A8409
035DC8SOFTWAREILE A:576 , TRP A:585 , SER A:586 , ARG A:973 , HOH A:4101BINDING SITE FOR RESIDUE DMS A8411
036DC9SOFTWAREGLY A:275 , GLY A:276 , GLU A:277 , VAL A:289 , THR A:290 , ARG A:292BINDING SITE FOR RESIDUE DMS A8412
037EC1SOFTWAREVAL A:84 , VAL A:85 , HIS A:93BINDING SITE FOR RESIDUE DMS A8414
038EC2SOFTWAREARG A:251 , ASP A:252 , ARG D:251 , TYR D:253 , HOH D:4836BINDING SITE FOR RESIDUE DMS A8416
039EC3SOFTWAREHIS A:93 , GLY A:94 , TYR A:95BINDING SITE FOR RESIDUE DMS A8421
040EC4SOFTWARESER A:647 , ASP A:648 , ASN A:649 , GLU A:650 , PRO A:703 , ASN A:704 , NA A:3104BINDING SITE FOR RESIDUE DMS A8425
041EC5SOFTWAREASP A:45 , ARG A:46 , PRO A:47 , HOH A:4466BINDING SITE FOR RESIDUE DMS A8501
042EC6SOFTWAREGLN A:50 , GLU A:136 , HIS A:216BINDING SITE FOR RESIDUE DMS A8504
043EC7SOFTWAREGLN A:266 , VAL A:267 , ALA A:268 , HOH A:4610BINDING SITE FOR RESIDUE DMS A8602
044EC8SOFTWARETHR B:229 , GLY B:331 , ARG B:448 , ASN B:449 , PRO B:451 , ARG B:482 , HOH B:4024BINDING SITE FOR RESIDUE DMS B8401
045EC9SOFTWAREARG B:557 , HIS B:622 , GLN B:625 , GLN B:628 , HOH B:4216BINDING SITE FOR RESIDUE DMS B8402
046FC1SOFTWARELYS B:380 , ASN B:383 , PHE B:626 , TYR B:642 , TRP B:708 , HOH B:4225BINDING SITE FOR RESIDUE DMS B8403
047FC2SOFTWAREPRO B:32 , PHE B:33 , TRP B:36 , ALA B:327 , HOH B:4416 , HOH B:4593BINDING SITE FOR RESIDUE DMS B8404
048FC3SOFTWARETHR B:271 , LEU B:291 , ARG B:292BINDING SITE FOR RESIDUE DMS B8405
049FC4SOFTWAREGLU B:314 , HIS B:316 , GLY B:320 , THR B:321BINDING SITE FOR RESIDUE DMS B8406
050FC5SOFTWARELEU B:54 , ASN B:55 , GLY B:56 , GLU B:57BINDING SITE FOR RESIDUE DMS B8408
051FC6SOFTWAREGLU B:334 , VAL B:335 , PRO B:480 , HOH B:4220 , HOH B:4223 , HOH B:4501BINDING SITE FOR RESIDUE DMS B8409
052FC7SOFTWAREILE B:576 , PRO B:584 , SER B:586 , ARG B:973 , HOH B:4115BINDING SITE FOR RESIDUE DMS B8411
053FC8SOFTWAREGLY B:275 , GLY B:276 , THR B:290 , ARG B:292BINDING SITE FOR RESIDUE DMS B8412
054FC9SOFTWARETHR B:83 , VAL B:84 , VAL B:85 , HIS B:93BINDING SITE FOR RESIDUE DMS B8414
055GC1SOFTWARELEU B:250 , ARG B:251 , ASP B:252BINDING SITE FOR RESIDUE DMS B8416
056GC2SOFTWAREPHE B:231 , ASN B:232 , ASP B:233 , PHE B:235 , GLU B:334BINDING SITE FOR RESIDUE DMS B8417
057GC3SOFTWAREHIS B:93 , GLY B:94 , TYR B:95BINDING SITE FOR RESIDUE DMS B8421
058GC4SOFTWARETYR B:926 , TYR B:962 , ARG B:973BINDING SITE FOR RESIDUE DMS B8423
059GC5SOFTWARESER B:647 , ASP B:648 , ASN B:649 , GLU B:650 , PRO B:703 , NA B:3104BINDING SITE FOR RESIDUE DMS B8425
060GC6SOFTWAREARG B:37 , TRP B:133 , HIS B:216BINDING SITE FOR RESIDUE DMS B8504
061GC7SOFTWAREARG B:961 , TYR B:962BINDING SITE FOR RESIDUE DMS B8508
062GC8SOFTWAREVAL B:267 , ASN B:294 , GLU B:296BINDING SITE FOR RESIDUE DMS B8601
063GC9SOFTWARETHR C:229 , GLY C:331 , ARG C:448 , ASN C:449 , PRO C:451 , ARG C:482 , HOH C:4031BINDING SITE FOR RESIDUE DMS C8401
064HC1SOFTWAREARG C:557 , HIS C:622 , GLN C:623 , GLN C:625 , GLN C:628 , HOH C:4225BINDING SITE FOR RESIDUE DMS C8402
065HC2SOFTWARELYS C:380 , ASN C:383 , PHE C:626 , TYR C:642 , TRP C:708 , HOH C:4097 , HOH C:4234 , HOH C:4525BINDING SITE FOR RESIDUE DMS C8403
066HC3SOFTWAREPRO C:32 , PHE C:33 , TRP C:36 , ASP C:45 , ARG C:310 , ALA C:327 , HOH C:4149 , HOH C:4412 , HOH C:4580BINDING SITE FOR RESIDUE DMS C8404
067HC4SOFTWARETHR C:271 , LEU C:291 , ARG C:292 , HOH C:4619 , HOH C:4823BINDING SITE FOR RESIDUE DMS C8405
068HC5SOFTWAREGLU C:508 , PRO C:1001 , VAL C:1003 , GLN C:1008 , HOH C:4057 , HOH C:4262BINDING SITE FOR RESIDUE DMS C8407
069HC6SOFTWARELEU C:54 , ASN C:55 , HOH C:4646BINDING SITE FOR RESIDUE DMS C8408
070HC7SOFTWAREGLU C:334 , VAL C:335 , PRO C:480 , HOH C:4229 , HOH C:4232 , HOH C:4350BINDING SITE FOR RESIDUE DMS C8409
071HC8SOFTWAREILE C:576 , PRO C:584 , SER C:586 , ARG C:973BINDING SITE FOR RESIDUE DMS C8411
072HC9SOFTWAREGLY C:275 , VAL C:289 , THR C:290 , HOH C:4348BINDING SITE FOR RESIDUE DMS C8412
073IC1SOFTWAREVAL C:84 , VAL C:85 , HIS C:93BINDING SITE FOR RESIDUE DMS C8414
074IC2SOFTWAREARG C:251 , ASP C:252BINDING SITE FOR RESIDUE DMS C8416
075IC3SOFTWAREPHE C:231 , ASN C:232 , ASP C:233 , PHE C:235 , GLU C:334 , HOH C:4570BINDING SITE FOR RESIDUE DMS C8417
076IC4SOFTWARETYR C:105 , PRO C:106 , ILE C:107 , THR C:108 , HOH C:4346BINDING SITE FOR RESIDUE DMS C8419
077IC5SOFTWAREHOH B:4578 , HOH B:4700 , ASP C:428 , PRO C:430BINDING SITE FOR RESIDUE DMS C8420
078IC6SOFTWAREHIS C:93 , GLY C:94 , TYR C:95 , HOH C:4497BINDING SITE FOR RESIDUE DMS C8421
079IC7SOFTWARETYR C:926 , TYR C:962 , ARG C:973BINDING SITE FOR RESIDUE DMS C8423
080IC8SOFTWARESER C:647 , ASP C:648 , ASN C:649 , GLU C:650 , PRO C:703 , ASN C:704 , NA C:3104BINDING SITE FOR RESIDUE DMS C8425
081IC9SOFTWARETRP C:36 , ASP C:45 , ARG C:46 , PRO C:47 , SER C:48 , HOH C:4482BINDING SITE FOR RESIDUE DMS C8501
082JC1SOFTWAREGLN C:50 , SER C:132 , TRP C:133BINDING SITE FOR RESIDUE DMS C8504
083JC2SOFTWAREASN C:102 , ASP C:598 , PHE C:601 , VAL C:795 , HOH C:4719BINDING SITE FOR RESIDUE DMS C8506
084JC3SOFTWAREVAL C:267 , ASN C:294 , GLU C:296 , HOH C:4533BINDING SITE FOR RESIDUE DMS C8601
085JC4SOFTWAREGLN C:266 , VAL C:267 , ALA C:268 , LEU D:740BINDING SITE FOR RESIDUE DMS C8602
086JC5SOFTWARETRP D:474 , VAL D:478 , HOH D:4592BINDING SITE FOR RESIDUE DMS D8420
087JC6SOFTWARETHR D:229 , VAL D:330 , GLY D:331 , ASN D:449 , PRO D:451 , HOH D:4047BINDING SITE FOR RESIDUE DMS D8401
088JC7SOFTWAREARG D:557 , HIS D:622 , GLN D:623 , GLN D:625 , GLN D:628 , HOH D:4237BINDING SITE FOR RESIDUE DMS D8402
089JC8SOFTWARELYS D:380 , ASN D:383 , PHE D:626 , TYR D:642 , TRP D:708 , HOH D:4329BINDING SITE FOR RESIDUE DMS D8403
090JC9SOFTWAREPRO D:32 , PHE D:33 , ALA D:34 , TRP D:36 , ASP D:45 , ALA D:327 , HOH D:4164 , HOH D:4448 , HOH D:4499BINDING SITE FOR RESIDUE DMS D8404
091KC1SOFTWARETHR D:271 , LEU D:291 , ARG D:292 , HOH D:4651BINDING SITE FOR RESIDUE DMS D8405
092KC2SOFTWAREGLU A:136 , GLU D:314 , HIS D:316 , GLY D:320 , DMS D:8701BINDING SITE FOR RESIDUE DMS D8406
093KC3SOFTWARELEU D:54 , ASN D:55 , GLY D:56 , GLU D:57 , HOH D:4680BINDING SITE FOR RESIDUE DMS D8408
094KC4SOFTWAREVAL D:335 , ARG D:336 , PRO D:480BINDING SITE FOR RESIDUE DMS D8409
095KC5SOFTWARETRP D:585 , SER D:586 , ARG D:973 , HOH D:4286BINDING SITE FOR RESIDUE DMS D8411
096KC6SOFTWAREGLY D:275 , GLY D:276 , GLU D:277 , THR D:290 , ARG D:292BINDING SITE FOR RESIDUE DMS D8412
097KC7SOFTWAREVAL D:85 , HIS D:93 , HOH D:4687BINDING SITE FOR RESIDUE DMS D8414
098KC8SOFTWARELEU D:250 , ARG D:251 , ASP D:252BINDING SITE FOR RESIDUE DMS D8416
099KC9SOFTWARETYR D:105 , PRO D:106 , ILE D:107 , THR D:108 , HOH D:4366 , HOH D:4485BINDING SITE FOR RESIDUE DMS D8419
100LC1SOFTWAREHIS D:93 , GLY D:94 , TYR D:95BINDING SITE FOR RESIDUE DMS D8421
101LC2SOFTWARETYR D:926 , TYR D:962 , ARG D:973 , LEU D:976 , HOH D:4553BINDING SITE FOR RESIDUE DMS D8423
102LC3SOFTWARELYS B:1023 , SER D:647 , ASP D:648 , ASN D:649 , GLU D:650 , PRO D:703 , ASN D:704 , NA D:3104BINDING SITE FOR RESIDUE DMS D8425
103LC4SOFTWAREALA D:34 , TRP D:36 , ASP D:45 , HOH D:4510BINDING SITE FOR RESIDUE DMS D8501
104LC5SOFTWAREASN D:102 , ASP D:598BINDING SITE FOR RESIDUE DMS D8506
105LC6SOFTWARESER D:923 , TYR D:926 , ARG D:961 , TYR D:962 , HOH D:4147BINDING SITE FOR RESIDUE DMS D8508
106LC7SOFTWAREGLU A:136 , PRO A:218 , ILE A:323 , HOH A:4674 , HOH A:4677 , GLY D:320 , LEU D:322 , HOH D:4830 , DMS D:8406BINDING SITE FOR RESIDUE DMS D8701
107LC8SOFTWAREGLN D:49 , ASP D:130 , SER D:132 , TRP D:133 , HOH D:4835BINDING SITE FOR RESIDUE DMS D8703
108LC9SOFTWARETRP D:133 , LEU D:134 , GLN D:135 , GLU D:136 , SER D:174BINDING SITE FOR RESIDUE DMS D8705

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3DYM)

(-) Cis Peptide Bonds  (32, 32)

Asymmetric/Biological Unit
No.Residues
1Val A:86 -Pro A:87
2Pro A:111 -Pro A:112
3Asn A:147 -Ser A:148
4Ser A:390 -His A:391
5Val A:421 -Pro A:422
6Trp A:568 -Asp A:569
7Thr A:595 -Pro A:596
8Gly A:901 -Pro A:902
9Val B:86 -Pro B:87
10Pro B:111 -Pro B:112
11Asn B:147 -Ser B:148
12Ser B:390 -His B:391
13Val B:421 -Pro B:422
14Trp B:568 -Asp B:569
15Thr B:595 -Pro B:596
16Gly B:901 -Pro B:902
17Val C:86 -Pro C:87
18Pro C:111 -Pro C:112
19Asn C:147 -Ser C:148
20Ser C:390 -His C:391
21Val C:421 -Pro C:422
22Trp C:568 -Asp C:569
23Thr C:595 -Pro C:596
24Gly C:901 -Pro C:902
25Val D:86 -Pro D:87
26Pro D:111 -Pro D:112
27Asn D:147 -Ser D:148
28Ser D:390 -His D:391
29Val D:421 -Pro D:422
30Trp D:568 -Asp D:569
31Thr D:595 -Pro D:596
32Gly D:901 -Pro D:902

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3DYM)

(-) PROSITE Motifs  (2, 8)

Asymmetric/Biological Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F2_1PS00719 Glycosyl hydrolases family 2 signature 1.BGAL_ECOLI386-411
 
 
 		  4A:385-410
B:385-410
C:385-410
D:385-410
2GLYCOSYL_HYDROL_F2_2PS00608 Glycosyl hydrolases family 2 acid/base catalyst.BGAL_ECOLI448-462
 
 
 		  4A:447-461
B:447-461
C:447-461
D:447-461

(-) Exons   (0, 0)

(no "Exon" information available for 3DYM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1011
 aligned with BGAL_ECOLI | P00722 from UniProtKB/Swiss-Prot  Length:1024

    Alignment length:1011
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023 
          BGAL_ECOLI     14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
               SCOP domains d3dyma1 A:13-219 automated matches                                                                                                                                                                             d3dyma2 A:220-333 automated matches                                                                               d3dyma3 A:334-625 automated matches                                                                                                                                                                                                                                                                 d3dyma4 A:626-730 automated matches                                                                      d3dyma5 A:731-1023 automated matches                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 3dymA01 A:13-218 Galactose-binding domain-like                                                                                                                                                                3dymA02 A:219-333  [code=2.60.40.320, no name defined]                                                             3dymA03 A:334-624 Glycosidases                                                                                                                                                                                                                                                                     3dymA04 A:625-730  [code=2.60.40.320, no name defined]                                                    3dymA05 A:731-1023  [code=2.70.98.10, no name defined]                                                                                                                                                                                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh....ee.............hhhhhhhh.....eee..eeeeeeee.hhhhhhhhhhh......eeeee..hhhhhh....eee..................eeeeeeeeeehhhhhhh.eeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeee...eeeeeeeeeee.....eeeeeeeeeee......eeeeeeeee..eeeeeeeee..............eeeeeeeee............eeeeeeeee....eeeeeeeee....eeee..eeee..ee..eeeee............hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh.eeeee................hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee.................................hhhhhhh.......eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh...........hhhhhhhhhh..eeeeee..eeeeee..........eeeeeeee..eeeeeeeee.......eeeee..........eeeeeeeeeee..........eeeeeeeeeeeee.............eeee...eeeeee..eeeeee.....eeeeee..ee.eeeeeeee.....hhhhhh..........hhhhhhhhh.....eeeeeeeeeee...eeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee........eeeeeeee.....eeeeeeee............eeeeeeee.hhhh...........eeeeeeeee..eeeeeeeeeeee..hhhhhhhh.hhhhh.....eeeeeeeee.............hhhhh....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      ------------------------------------GLYCOSYL_HYDROL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3dym A   13 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETEGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1023
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022 


Chain B from PDB  Type:PROTEIN  Length:1011
 aligned with BGAL_ECOLI | P00722 from UniProtKB/Swiss-Prot  Length:1024

    Alignment length:1011
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023 
          BGAL_ECOLI     14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
               SCOP domains d3dymb1 B:13-219 automated matches                                                                                                                                                                             d3dymb2 B:220-333 automated matches                                                                               d3dymb3 B:334-625 automated matches                                                                                                                                                                                                                                                                 d3dymb4 B:626-730 automated matches                                                                      d3dymb5 B:731-1023 automated matches                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 3dymB01 B:13-218 Galactose-binding domain-like                                                                                                                                                                3dymB02 B:219-333  [code=2.60.40.320, no name defined]                                                             3dymB03 B:334-624 Glycosidases                                                                                                                                                                                                                                                                     3dymB04 B:625-730  [code=2.60.40.320, no name defined]                                                    3dymB05 B:731-1023  [code=2.70.98.10, no name defined]                                                                                                                                                                                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh....ee.............hhhhhhhh.....eee..eeeeeeee.hhhhhhhhhhhh.....eeeee..hhhhhh....eee..................eeeeeeeeeehhhhhhh.eeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeee...eeeeeeeeeee.....eeeeeeeeeee......eeeeeeeee..eeeeeeee.....eee..ee...eeeeeeeee............eeeeeeeee....eeeeeeeee....eeee..eeee..ee..eeeee............hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh.eeeee................hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee.................................hhhhhh........eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh...........hhhhhhhhhh..eeeeee..eeeeee..........eeeeeeee..eeeeeeeee.......eeeee..........eeeeeeeeeee..........eeeeeeeeeeeee.............eeee...eeeeee..eeeeee.....eeeeee..ee.eeeeeeee.....hhhhhh..........hhhhhhhhhh....eeeeeeeeeee...eeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee........eeeeeeee.....eeeeeeee............eeeeeeee.hhhh...........eeeeeeeee..eeeeeeeeeeee..hhhhhhhh.hhhhh.....eeeeeeeee.............hhhhh....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      ------------------------------------GLYCOSYL_HYDROL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3dym B   13 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETEGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1023
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022 


Chain C from PDB  Type:PROTEIN  Length:1011
 aligned with BGAL_ECOLI | P00722 from UniProtKB/Swiss-Prot  Length:1024

    Alignment length:1011
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023 
          BGAL_ECOLI     14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
               SCOP domains d3dymc1 C:13-219 automated matches                                                                                                                                                                             d3dymc2 C:220-333 automated matches                                                                               d3dymc3 C:334-625 automated matches                                                                                                                                                                                                                                                                 d3dymc4 C:626-730 automated matches                                                                      d3dymc5 C:731-1023 automated matches                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 3dymC01 C:13-218 Galactose-binding domain-like                                                                                                                                                                3dymC02 C:219-333  [code=2.60.40.320, no name defined]                                                             3dymC03 C:334-624 Glycosidases                                                                                                                                                                                                                                                                     3dymC04 C:625-730  [code=2.60.40.320, no name defined]                                                    3dymC05 C:731-1023  [code=2.70.98.10, no name defined]                                                                                                                                                                                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh....ee.............hhhhhhhh.....eee..eeeeeeee.hhhhhhhhhhhh.....eeeee..hhhhhh....eee..................eeeeeeeeeehhhhhhh.eeeeee..ee.eeeeee..eeeeeee.....eeee.......eeeeeeeeee..hhhhhhh...eee..ee...eeeeee...eeeeeeeeeee.....eeeeeeeeeee......eeeeeeeee..eeeeeeee...............eeeeeeeee............eeeeeeeee....eeeeeeeee....eeee..eeee..ee..eeeee............hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh.eeeee................hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee.................................hhhhhhh.......eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh...........hhhhhhhhhh..eeeeee..eeeeee..........eeeeeeee..eeeeeeeee.......eeeee..........eeeeeeeeee............eeeeeeeeeeee.............eeee...eeeeee..eeeeee.....eeeeee..ee......eee.....hhhhhh..........hhhhhhhhhh....eeeeeeeeeee...eeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee........eeeeeeee.....eeeeeeee............eeeeeeee.hhhh...........eeeeeeeee..eeeeeeeeeeee..hhhhhhhh.hhhhh.....eeeeeeeee.............hhhhh....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      ------------------------------------GLYCOSYL_HYDROL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3dym C   13 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETEGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1023
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022 


Chain D from PDB  Type:PROTEIN  Length:1011
 aligned with BGAL_ECOLI | P00722 from UniProtKB/Swiss-Prot  Length:1024

    Alignment length:1011
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013      1023 
          BGAL_ECOLI     14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
               SCOP domains d3dymd1 D:13-219 automated matches                                                                                                                                                                             d3dymd2 D:220-333 automated matches                                                                               d3dymd3 D:334-625 automated matches                                                                                                                                                                                                                                                                 d3dymd4 D:626-730 automated matches                                                                      d3dymd5 D:731-1023 automated matches                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 3dymD01 D:13-218 Galactose-binding domain-like                                                                                                                                                                3dymD02 D:219-333  [code=2.60.40.320, no name defined]                                                             3dymD03 D:334-624 Glycosidases                                                                                                                                                                                                                                                                     3dymD04 D:625-730  [code=2.60.40.320, no name defined]                                                    3dymD05 D:731-1023  [code=2.70.98.10, no name defined]                                                                                                                                                                                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh....ee.............hhhhhhhh.....eee..eeeeeeee.hhhhhhhhhhhh.....eeeee..hhhhhh....eee..................eeeeeeee..hhhhhhh.eeeeee..ee.eeeeee..eeeeeee.....eeee.hhhh....eeeeeeee..hhhhhhh...eee..ee...eeeeee...eeeeeeeeeee.....eeeeeeeeeee......eeeeeeeee..eeeeeeeee..............eeeeeeeee............eeeeeeeee....eeeeeeeee....eeee..eeee..ee..eeeee............hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhh.eeeee................hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh....ee.................................hhhhhhh.......eeeeee.........hhhhhhhhhhhh..eeeeee.......eeee.....eeee..........hhhhhh...........hhhhhhhhhh..eeeeee..eeeeee..........eeeeeeee..eeeeeeeee.......eeeee..........eeeeeeeeeee..........eeeeeeeeeeeee.............eeee...eeeeee..eeeeee.....eeeeee..ee.eeeeeeee.....hhhhhh..........hhhhhhhhh.....eeeeeeeeeee...eeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee........eeeeeeee.....eeeeeeee............eeeeeeee.hhhh...........eeeeeeeee..eeeeeeeeeeee..hhhhhhhh.hhhhh.....eeeeeeeee.............hhhhh....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      ------------------------------------GLYCOSYL_HYDROL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3dym D   13 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETEGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1023
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 20)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (4, 20)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3DYM)

(-) Gene Ontology  (14, 14)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (BGAL_ECOLI | P00722)
molecular function
    GO:0031420    alkali metal ion binding    Interacting selectively and non-covalently with any alkali metal ion; alkali metals are those elements in group Ia of the periodic table, with the exception of hydrogen.
    GO:0004565    beta-galactosidase activity    Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0005990    lactose catabolic process    The chemical reactions and pathways resulting in the breakdown of lactose, the disaccharide galactopyranosyl-glucose.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0009341    beta-galactosidase complex    A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.
    GO:0043231    intracellular membrane-bounded organelle    Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    DMS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
    FC4  [ RasMol ]  +environment [ RasMol ]
    FC5  [ RasMol ]  +environment [ RasMol ]
    FC6  [ RasMol ]  +environment [ RasMol ]
    FC7  [ RasMol ]  +environment [ RasMol ]
    FC8  [ RasMol ]  +environment [ RasMol ]
    FC9  [ RasMol ]  +environment [ RasMol ]
    GC1  [ RasMol ]  +environment [ RasMol ]
    GC2  [ RasMol ]  +environment [ RasMol ]
    GC3  [ RasMol ]  +environment [ RasMol ]
    GC4  [ RasMol ]  +environment [ RasMol ]
    GC5  [ RasMol ]  +environment [ RasMol ]
    GC6  [ RasMol ]  +environment [ RasMol ]
    GC7  [ RasMol ]  +environment [ RasMol ]
    GC8  [ RasMol ]  +environment [ RasMol ]
    GC9  [ RasMol ]  +environment [ RasMol ]
    HC1  [ RasMol ]  +environment [ RasMol ]
    HC2  [ RasMol ]  +environment [ RasMol ]
    HC3  [ RasMol ]  +environment [ RasMol ]
    HC4  [ RasMol ]  +environment [ RasMol ]
    HC5  [ RasMol ]  +environment [ RasMol ]
    HC6  [ RasMol ]  +environment [ RasMol ]
    HC7  [ RasMol ]  +environment [ RasMol ]
    HC8  [ RasMol ]  +environment [ RasMol ]
    HC9  [ RasMol ]  +environment [ RasMol ]
    IC1  [ RasMol ]  +environment [ RasMol ]
    IC2  [ RasMol ]  +environment [ RasMol ]
    IC3  [ RasMol ]  +environment [ RasMol ]
    IC4  [ RasMol ]  +environment [ RasMol ]
    IC5  [ RasMol ]  +environment [ RasMol ]
    IC6  [ RasMol ]  +environment [ RasMol ]
    IC7  [ RasMol ]  +environment [ RasMol ]
    IC8  [ RasMol ]  +environment [ RasMol ]
    IC9  [ RasMol ]  +environment [ RasMol ]
    JC1  [ RasMol ]  +environment [ RasMol ]
    JC2  [ RasMol ]  +environment [ RasMol ]
    JC3  [ RasMol ]  +environment [ RasMol ]
    JC4  [ RasMol ]  +environment [ RasMol ]
    JC5  [ RasMol ]  +environment [ RasMol ]
    JC6  [ RasMol ]  +environment [ RasMol ]
    JC7  [ RasMol ]  +environment [ RasMol ]
    JC8  [ RasMol ]  +environment [ RasMol ]
    JC9  [ RasMol ]  +environment [ RasMol ]
    KC1  [ RasMol ]  +environment [ RasMol ]
    KC2  [ RasMol ]  +environment [ RasMol ]
    KC3  [ RasMol ]  +environment [ RasMol ]
    KC4  [ RasMol ]  +environment [ RasMol ]
    KC5  [ RasMol ]  +environment [ RasMol ]
    KC6  [ RasMol ]  +environment [ RasMol ]
    KC7  [ RasMol ]  +environment [ RasMol ]
    KC8  [ RasMol ]  +environment [ RasMol ]
    KC9  [ RasMol ]  +environment [ RasMol ]
    LC1  [ RasMol ]  +environment [ RasMol ]
    LC2  [ RasMol ]  +environment [ RasMol ]
    LC3  [ RasMol ]  +environment [ RasMol ]
    LC4  [ RasMol ]  +environment [ RasMol ]
    LC5  [ RasMol ]  +environment [ RasMol ]
    LC6  [ RasMol ]  +environment [ RasMol ]
    LC7  [ RasMol ]  +environment [ RasMol ]
    LC8  [ RasMol ]  +environment [ RasMol ]
    LC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asn A:147 - Ser A:148   [ RasMol ]  
    Asn B:147 - Ser B:148   [ RasMol ]  
    Asn C:147 - Ser C:148   [ RasMol ]  
    Asn D:147 - Ser D:148   [ RasMol ]  
    Gly A:901 - Pro A:902   [ RasMol ]  
    Gly B:901 - Pro B:902   [ RasMol ]  
    Gly C:901 - Pro C:902   [ RasMol ]  
    Gly D:901 - Pro D:902   [ RasMol ]  
    Pro A:111 - Pro A:112   [ RasMol ]  
    Pro B:111 - Pro B:112   [ RasMol ]  
    Pro C:111 - Pro C:112   [ RasMol ]  
    Pro D:111 - Pro D:112   [ RasMol ]  
    Ser A:390 - His A:391   [ RasMol ]  
    Ser B:390 - His B:391   [ RasMol ]  
    Ser C:390 - His C:391   [ RasMol ]  
    Ser D:390 - His D:391   [ RasMol ]  
    Thr A:595 - Pro A:596   [ RasMol ]  
    Thr B:595 - Pro B:596   [ RasMol ]  
    Thr C:595 - Pro C:596   [ RasMol ]  
    Thr D:595 - Pro D:596   [ RasMol ]  
    Trp A:568 - Asp A:569   [ RasMol ]  
    Trp B:568 - Asp B:569   [ RasMol ]  
    Trp C:568 - Asp C:569   [ RasMol ]  
    Trp D:568 - Asp D:569   [ RasMol ]  
    Val A:421 - Pro A:422   [ RasMol ]  
    Val A:86 - Pro A:87   [ RasMol ]  
    Val B:421 - Pro B:422   [ RasMol ]  
    Val B:86 - Pro B:87   [ RasMol ]  
    Val C:421 - Pro C:422   [ RasMol ]  
    Val C:86 - Pro C:87   [ RasMol ]  
    Val D:421 - Pro D:422   [ RasMol ]  
    Val D:86 - Pro D:87   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3dym
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  BGAL_ECOLI | P00722
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.23
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  BGAL_ECOLI | P00722
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BGAL_ECOLI | P00722: 1dp0 1f4a 1f4h 1hn1 1jyn 1jyv 1jyw 1jyx 1jz2 1jz3 1jz4 1jz5 1jz6 1jz7 1jz8 1px3 1px4 3czj 3dyo 3dyp 3e1f 3i3b 3i3d 3i3e 3iap 3iaq 3j7h 3muy 3muz 3mv0 3mv1 3sep 3t08 3t09 3t0a 3t0b 3t0d 3t2o 3t2p 3t2q 3vd3 3vd4 3vd5 3vd7 3vd9 3vda 3vdb 3vdc 4ckd 4duv 4duw 4dux 4ttg 4v40 4v41 4v44 4v45 5a1a

(-) Related Entries Specified in the PDB File

1dp0 3dyo 3dyp