Chain A from PDB Type:PROTEIN Length:134
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:134
1
| 8 18 28 38 48 58 68 78 88 98 108 118 128
O86696_STRCO - --MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh...ee.hhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j A -1 SHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 8 | 18 28 38 48 58 68 78 88 98 108 118 128
| 11-MSE
1-MSE
Chain B from PDB Type:PROTEIN Length:134
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:134
1
| 8 18 28 38 48 58 68 78 88 98 108 118 128
O86696_STRCO - --MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh...ee.hhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j B -1 SHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 8 | 18 28 38 48 58 68 78 88 98 108 118 128
1-MSE 11-MSE
Chain C from PDB Type:PROTEIN Length:135
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:135
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127
O86696_STRCO - ---MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3d7jC00 C:-2-132 [code=3.30.479.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh....hhhhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j C -2 GSHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 7 | 17 27 37 47 57 67 77 87 97 107 117 127
1-MSE 11-MSE
Chain D from PDB Type:PROTEIN Length:134
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:134
1
| 8 18 28 38 48 58 68 78 88 98 108 118 128
O86696_STRCO - --MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh...ee.hhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j D -1 SHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 8 | 18 28 38 48 58 68 78 88 98 108 118 128
1-MSE 11-MSE
Chain E from PDB Type:PROTEIN Length:134
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:134
1
| 8 18 28 38 48 58 68 78 88 98 108 118 128
O86696_STRCO - --MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh...ee.hhhhhhh....hhhhhhhhhhhhhhhhhhhh..hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j E -1 SHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 8 | 18 28 38 48 58 68 78 88 98 108 118 128
1-MSE 11-MSE
Chain F from PDB Type:PROTEIN Length:135
aligned with O86696_STRCO | O86696 from UniProtKB/TrEMBL Length:132
Alignment length:135
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127
O86696_STRCO - ---MFSITVRDHIMIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3d7jF00 F:-2-132 [code=3.30.479.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeeeee...hhhhhhhhh.eeeeeeeeeeeee..........hhhhhhhhhhhhhhh...ee.hhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhh.eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
3d7j F -2 GSHmFSITVRDHImIAHSFRGDVFGPAQRLHGATFLVDATFRREQLDEDNIVVDIGLATQELGAVVGALNYRNLDNEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERAL 132
| 7 | 17 27 37 47 57 67 77 87 97 107 117 127
1-MSE 11-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |