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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PROTEIN ATU1372 WITH UNKNOWN FUNCTION FROM AGROBACTERIUM TUMEFACIENS
 
Authors :  R. Zhang, X. Xu, J. Gu, A. Savchenko, A. M. Edwards, A. Joachimiak, Midwe For Structural Genomics (Mcsg)
Date :  30 Apr 08  (Deposition) - 01 Jul 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,I,K  (1x)
Biol. Unit 2:  E,G,L  (1x)
Biol. Unit 3:  C,F,J  (1x)
Biol. Unit 4:  B,D,H  (1x)
Keywords :  Protein With Unknown Function, Structural Genomics, Psi, Mcsg, Protein Structure Initiative, Midwest Center For Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Zhang, X. Xu, J. Gu, A. Savchenko, A. M. Edwards, A. Joachimiak
The Crystal Structure Of The Protein Atu1372 With Unknown Function From Agrobacterium Tumefaciens.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: 33970
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PDM68
    Expression System Strain: BL21
    Expression System Vector Type: PLASMID
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR.
    Organism Taxid: 176299
    Strain: C58

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): A       I K 
Biological Unit 2 (1x):     E G    L
Biological Unit 3 (1x):   C  F   J  
Biological Unit 4 (1x):  B D   H    

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 48)

Asymmetric Unit (2, 48)
No.NameCountTypeFull Name
1MSE36Mod. Amino AcidSELENOMETHIONINE
2PG512Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
Biological Unit 1 (2, 12)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE
2PG53Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
Biological Unit 2 (2, 12)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE
2PG53Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
Biological Unit 3 (2, 13)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE
2PG54Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
Biological Unit 4 (2, 11)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE
2PG52Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU D:114 , ARG F:66 , ASP H:67 , ASN H:152BINDING SITE FOR RESIDUE PG5 H 166
02AC2SOFTWARETHR G:61 , ASP G:67 , ASN G:152 , ARG I:66 , GLU L:114BINDING SITE FOR RESIDUE PG5 G 166
03AC3SOFTWAREGLU A:114 , ARG E:66 , ASP E:67 , THR K:61 , GLY K:62 , ASN K:152BINDING SITE FOR RESIDUE PG5 K 166
04AC4SOFTWARETHR A:61 , ASN A:152 , GLU I:114 , ARG L:66BINDING SITE FOR RESIDUE PG5 A 166
05AC5SOFTWAREARG G:66 , THR I:61 , ASP I:67 , ASN I:152BINDING SITE FOR RESIDUE PG5 I 166
06AC6SOFTWAREARG A:66 , THR L:61 , ASP L:67 , ASN L:152BINDING SITE FOR RESIDUE PG5 L 166
07AC7SOFTWARETHR B:61 , ASN B:152 , ARG C:66BINDING SITE FOR RESIDUE PG5 B 166
08AC8SOFTWAREARG B:66 , THR C:61 , GLY C:62 , ASP C:67 , ASN C:152 , GLU J:114BINDING SITE FOR RESIDUE PG5 C 166
09AC9SOFTWARETHR F:61 , ASP F:67 , ASN F:152 , ARG H:66BINDING SITE FOR RESIDUE PG5 F 166
10BC1SOFTWAREARG D:66 , ASN J:152BINDING SITE FOR RESIDUE PG5 J 166
11BC2SOFTWAREGLU B:114 , GLY D:62 , ASP D:67 , ASN D:152 , ARG J:66BINDING SITE FOR RESIDUE PG5 J 167
12BC3SOFTWARETHR E:61 , ASP E:67 , ASN E:152 , GLU G:114 , ARG K:66BINDING SITE FOR RESIDUE PG5 E 166

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3D01)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3D01)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3D01)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3D01)

(-) Exons   (0, 0)

(no "Exon" information available for 3D01)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:158
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:163
                                     1                                                                                                                                                         
                                     1        11        21        31        41        51        61        71        81        91       101       111       121       131       141       151   
         A9CJ63_AGRFC     - ---------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEI 154
               SCOP domains d3d01a_ A: automated matche     s                                                                                                                                   SCOP domains
               CATH domains 3d01A00 A:1-163  [code=3.30     .1330.40, no name defined]                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh......-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 A   1 GTENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEI 163
                                    10        20      |  -  |     40        50  |     60        70        80        90       100       110       120       130       140     | 150       160   
                                    10-MSE           27    33                  53-MSE                                                                                      146-MSE             


Chain B from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:162
                                  1                                                                                                                                                           
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       154  
         A9CJ63_AGRFC     - ------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEIDV 156
               SCOP domains d3d01b_ B: automated ma     tches                                                                                                                                  SCOP domains
               CATH domains 3d01B00 B:4-165  [code=     3.30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh.....-----......eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3d01 B   4 NLYFQGmSDVIEGRLKELGFTLP-----AANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEIDV 165
                                  | 13        23  |     33        43        53        63        73        83        93       103       113       123       133       143  |    153       163  
                                 10-MSE          26    32                   53-MSE                                                                                      146-MSE               


Chain C from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:162
                                   1                                                                                                                                                          
                                   | 3        13        23        33        43        53        63        73        83        93       103       113       123       133       143       153  
         A9CJ63_AGRFC     - -------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01c_ C: automated matc     hes                                                                                                                                  SCOP domains
               CATH domains 3d01C00 C:3-164  [code=3.     30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.....-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3d01 C   3 ENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                   |12        22    |    -|       42        52|       62        72        82        92       102       112       122       132       142   |   152       162  
                                  10-MSE           27    33                  53-MSE                                                                                      146-MSE              


Chain D from PDB  Type:PROTEIN  Length:156
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:161
                                   1                                                                                                                                                         
                                   | 3        13        23        33        43        53        63        73        83        93       103       113       123       133       143       153 
         A9CJ63_AGRFC     - -------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEI 154
               SCOP domains d3d01d_ D: automated matc     hes                                                                                                                                 SCOP domains
               CATH domains 3d01D00 D:3-163  [code=3.     30.1330.40, no name defined]                                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh......-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 D   3 ENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEI 163
                                   |12        22    |    -|       42        52|       62        72        82        92       102       112       122       132       142   |   152       162 
                                  10-MSE           27    33                  53-MSE                                                                                      146-MSE             


Chain E from PDB  Type:PROTEIN  Length:155
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:161
                                  1                                                                                                                                                          
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       154 
         A9CJ63_AGRFC     - ------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01e_ E: automated ma      tches                                                                                                                                SCOP domains
               CATH domains 3d01E00 E:4-164  [code=      3.30.1330.40, no name defined]                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh.....------.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 E   4 NLYFQGmSDVIEGRLKELGFTLP------ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                  | 13        23  |     33        43        53        63        73        83        93       103       113       123       133       143  |    153       163 
                                 10-MSE          26     33                  53-MSE                                                                                      146-MSE              


Chain F from PDB  Type:PROTEIN  Length:158
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:163
                                    1                                                                                                                                                          
                                    |2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152   
         A9CJ63_AGRFC     - --------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01f_ F: automated match     es                                                                                                                                   SCOP domains
               CATH domains 3d01F00 F:2-164  [code=3.3     0.1330.40, no name defined]                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh......-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 F   2 TENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                    11        21     |   - |      41        51 |      61        71        81        91       101       111       121       131       141    |  151       161   
                                   10-MSE           27    33                  53-MSE                                                                                      146-MSE              


Chain G from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:162
                                    1                                                                                                                                                         
                                    |2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  
         A9CJ63_AGRFC     - --------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEI 154
               SCOP domains d3d01g_ G: automated matc     hes                                                                                                                                  SCOP domains
               CATH domains 3d01G00 G:2-163  [code=3.     30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.....-----......eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3d01 G   2 TENLYFQGmSDVIEGRLKELGFTLP-----AANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEI 163
                                    11        21    |    -|       41        51 |      61        71        81        91       101       111       121       131       141    |  151       161  
                                   10-MSE          26    32                   53-MSE                                                                                      146-MSE             


Chain H from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:162
                                   1                                                                                                                                                          
                                   | 3        13        23        33        43        53        63        73        83        93       103       113       123       133       143       153  
         A9CJ63_AGRFC     - -------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01h_ H: automated matc     hes                                                                                                                                  SCOP domains
               CATH domains 3d01H00 H:3-164  [code=3.     30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh......-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3d01 H   3 ENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                   |12        22    |    -|       42        52|       62        72        82        92       102       112       122       132       142   |   152       162  
                                  10-MSE           27    33                  53-MSE                                                                                      146-MSE              


Chain I from PDB  Type:PROTEIN  Length:159
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:163
                                    1                                                                                                                                                          
                                    |2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152   
         A9CJ63_AGRFC     - --------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01i_ I: automated matche    s                                                                                                                                    SCOP domains
               CATH domains 3d01I00 I:2-164  [code=3.30    .1330.40, no name defined]                                                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.......----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 I   2 TENLYFQGmSDVIEGRLKELGFTLPVA----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                    11        21      |  - |      41        51 |      61        71        81        91       101       111       121       131       141    |  151       161   
                                   10-MSE            28   33                  53-MSE                                                                                      146-MSE              


Chain J from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:162
                                   1                                                                                                                                                          
                                   | 3        13        23        33        43        53        63        73        83        93       103       113       123       133       143       153  
         A9CJ63_AGRFC     - -------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEID 155
               SCOP domains d3d01j_ J: automated matc     hes                                                                                                                                  SCOP domains
               CATH domains 3d01J00 J:3-164  [code=3.     30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh......-----.....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3d01 J   3 ENLYFQGmSDVIEGRLKELGFTLPV-----ANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEID 164
                                   |12        22    |    -|       42        52|       62        72        82        92       102       112       122       132       142   |   152       162  
                                  10-MSE           27    33                  53-MSE                                                                                      146-MSE              


Chain K from PDB  Type:PROTEIN  Length:157
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:164
                                    1                                                                                                                                                           
                                    |2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152    
         A9CJ63_AGRFC     - --------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEIDV 156
               SCOP domains d3d01k_ K: automated matc       hes                                                                                                                                  SCOP domains
               CATH domains 3d01K00 K:2-165  [code=3.       30.1330.40, no name defined]                                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.....-------....eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 K   2 TENLYFQGmSDVIEGRLKELGFTLP-------NYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEIDV 165
                                    11        21    |    -  |     41        51 |      61        71        81        91       101       111       121       131       141    |  151       161    
                                   10-MSE          26      34                 53-MSE                                                                                      146-MSE               


Chain L from PDB  Type:PROTEIN  Length:160
 aligned with A9CJ63_AGRFC | A9CJ63 from UniProtKB/TrEMBL  Length:156

    Alignment length:164
                                    1                                                                                                                                                           
                                    |2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152    
         A9CJ63_AGRFC     - --------MSDVIEGRLKELGFTLPVAAAPAANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGMASLPFNASVEIDAIVEIDV 156
               SCOP domains d3d01l_ L: automated match    es                                                                                                                                     SCOP domains
               CATH domains 3d01L00 L:2-165  [code=3.3    0.1330.40, no name defined]                                                                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh......----......eeee..eeeeeee..ee..ee..........hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhh.eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3d01 L   2 TENLYFQGmSDVIEGRLKELGFTLPV----AANYVPFTISGNLLYVSGQLPmESGKIAVTGLVGRDVDVASAQRAAELCAVNILAQVKAALNGDLSKIRRVIKLNGFVASVPEFVEQHLVINGASNLIATVLGEPGRHARAAVGmASLPFNASVEIDAIVEIDV 165
                                    11        21     |   -|       41        51 |      61        71        81        91       101       111       121       131       141    |  151       161    
                                   10-MSE           27   32                   53-MSE                                                                                      146-MSE
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Class: Alpha and beta proteins (a+b) (23004)

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Class: Alpha Beta (26913)

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