Chain A from PDB Type:PROTEIN Length:237
aligned with Q19AK4_PSESY | Q19AK4 from UniProtKB/TrEMBL Length:245
Alignment length:237
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227
Q19AK4_PSESY - ---MRKSDREAFLGSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAKGYIEQLEVETDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSDMGLGKLSQDDHWQLLRLAEQKAIEPCVEALQYHLNRGVQAVTQYLNSKKATKA 234
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3c7jA01 A:-2-88 'winged helix' repressor DNA binding domain 3c7jA02 A:89-234 GntR ligand-binding domain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee...eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c7j A -2 SNAmRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRmPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRmFHLSLYAKTHNKRLmRLVEEGLNEEERFLRFNLSSmGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQKAGNV 234
| 7 17 27 37 47 57 | 67 77 87 97 107 117 127 137 147 157 | 167 177 | 187 197 207 217 227
| 61-MSE 146-MSE 161-MSE 182-MSE
1-MSE
Chain A from PDB Type:PROTEIN Length:237
aligned with Q87U60_PSESM | Q87U60 from UniProtKB/TrEMBL Length:245
Alignment length:237
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227
Q87U60_PSESM - ---MRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQKAGNV 234
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3c7jA01 A:-2-88 'winged helix' repressor DNA binding domain 3c7jA02 A:89-234 GntR ligand-binding domain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee...eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c7j A -2 SNAmRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRmPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRmFHLSLYAKTHNKRLmRLVEEGLNEEERFLRFNLSSmGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQKAGNV 234
| 7 17 27 37 47 57 | 67 77 87 97 107 117 127 137 147 157 | 167 177 | 187 197 207 217 227
1-MSE 61-MSE 146-MSE 161-MSE 182-MSE
Chain B from PDB Type:PROTEIN Length:227
aligned with Q19AK4_PSESY | Q19AK4 from UniProtKB/TrEMBL Length:245
Alignment length:232
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227
Q19AK4_PSESY - ---MRKSDREAFLGSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAKGYIEQLEVETDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSDMGLGKLSQDDHWQLLRLAEQKAIEPCVEALQYHLNRGVQAVTQYLNSK 229
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3c7jB01 B:-2-88 'winged helix' repressor DNA binding domain 3c7jB02 B:89-229 GntR ligand-binding domain-like CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee...eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh...-----.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c7j B -2 SNAmRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRmPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRmFHLSLYAKTHNKRLmRLVEEGLNEEERFLRFNLSSm-----SQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQ 229
| 7 17 27 37 47 57 | 67 77 87 97 107 117 127 137 147 157 | 167 177 | -| 197 207 217 227
1-MSE 61-MSE 146-MSE 161-MSE 182-MSE88
Chain B from PDB Type:PROTEIN Length:227
aligned with Q87U60_PSESM | Q87U60 from UniProtKB/TrEMBL Length:245
Alignment length:232
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227
Q87U60_PSESM - ---MRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQ 229
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3c7jB01 B:-2-88 'winged helix' repressor DNA binding domain 3c7jB02 B:89-229 GntR ligand-binding domain-like CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee...eeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh...-----.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c7j B -2 SNAmRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALRQQELATLFGVSRmPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRmFHLSLYAKTHNKRLmRLVEEGLNEEERFLRFNLSSm-----SQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQ 229
| 7 17 27 37 47 57 | 67 77 87 97 107 117 127 137 147 157 | 167 177 | -| 197 207 217 227
1-MSE 61-MSE 146-MSE 161-MSE 182-MSE88
Legend: |
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→ Mismatch |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |