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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  STRUCTURE OF WZZE- BACTERIAL POLYSACCHARIDE CO-POLYMERASE
 
Authors :  A. Tocilj, A. Matte, M. Cygler
Date :  01 Nov 07  (Deposition) - 22 Jan 08  (Release) - 18 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Wzz, Wzze, Bacterial Polysaccharide Co-Polymerase, Inner Membrane, Lipopolysaccharide Biosynthesis, Membrane, Transmembrane, Membrane Protein, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Tocilj, C. Munger, A. Proteau, R. Morona, L. Purins, E. Ajamian, J. Wagner, M. Papadopoulos, L. Van Den Bosch, J. L. Rubinstein, J. Fethiere, A. Matte, M. Cygler
Bacterial Polysaccharide Co-Polymerases Share A Common Framework For Control Of Polymer Length
Nat. Struct. Mol. Biol. V. 15 130 2008
PubMed-ID: 18204465  |  Reference-DOI: 10.1038/NSMB.1374

(-) Compounds

Molecule 1 - LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN WZZE
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PGEX-4T1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: PERIPLASMIC DOMAIN
    Gene: WZZE, WZZ
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83334

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 64)

Asymmetric/Biological Unit (1, 64)
No.NameCountTypeFull Name
1MSE64Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3B8O)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3B8O)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3B8O)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3B8O)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3B8O)

(-) Exons   (0, 0)

(no "Exon" information available for 3B8O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8oa1 A:55-319 Lipopolysaccha         ride biosynthesis protein WzzE                                                                                                                                                                                                    SCOP domains
               CATH domains 3b8oA01 A:55-288,A:290-319 FepE         -like                                                                                                                                                                                             -3b8oA01 A:55-288,A:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhhhh...---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.eeee..........eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o A  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain B from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8ob_ B: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oB01 B:55-288,B:290-319 FepE         -like                                                                                                                                                                                             -3b8oB01 B:55-288,B:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhhhhhhhh---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhheeee..hhhhh..eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhh............eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o B  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain C from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8oc_ C: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oC01 C:55-288,C:290-319 FepE         -like                                                                                                                                                                                             -3b8oC01 C:55-288,C:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhhhhh...---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.eeee..hhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o C  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain D from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8od_ D: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oD01 D:55-288,D:290-319 FepE         -like                                                                                                                                                                                             -3b8oD01 D:55-288,D:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhhhhhhhh---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhheeee..hhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o D  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain E from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8oe_ E: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oE01 E:55-288,E:290-319 FepE         -like                                                                                                                                                                                             -3b8oE01 E:55-288,E:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhhhhhhh---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.eeee..........eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhh....hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o E  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain F from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8of_ F: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oF01 F:55-288,F:290-319 FepE         -like                                                                                                                                                                                             -3b8oF01 F:55-288,F:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhhhhh...---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhheeee..hhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o F  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain G from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8og_ G: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oG01 G:55-288,G:290-319 FepE         -like                                                                                                                                                                                             -3b8oG01 G:55-288,G:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhhhhh...---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhheeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------.hhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o G  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE                                                                                                                                                                                                                         


Chain H from PDB  Type:PROTEIN  Length:221
 aligned with WZZE_ECO57 | P0AG01 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:265
                                    63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313     
           WZZE_ECO57    54 EWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318
               SCOP domains d3b8oh_ H: Lipopolysaccharide b         iosynthesis protein WzzE                                                                                                                                                                                                          SCOP domains
               CATH domains 3b8oH01 H:55-288,H:290-319 FepE         -like                                                                                                                                                                                             -3b8oH01 H:55-288,H:290-319     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhhhhhhh---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhheeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------------------------------hhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b8o H  55 EWSSTAITDRPTVNmLGGYYSQQQFLRNLDV---------PSVmDEAYKEFVmQLASWDTRREFWLQTDYYKQRmVGNSKADAALLDEmINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQmKAQVKRQEEVAKAIYDRRmNSIEQ-----------------------------------QARLENLQAVGPAFDLDYDQNRAmLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 319
                                    64    |   74        84|        -|  |   104  |    114       124    |  134       144       154       164       174       184       194       204 |     214       224|    |   -         -         -         - |     274       284    |  294       304       314     
                                         69-MSE          85        95  |      107-MSE               129-MSE       143-MSE                                                        206-MSE            225-MSE0                                 266                    289-MSE                          
                                                                      98-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Topology: Bacterial polysaccharide co-polymerase-like (4)
(-)
Homologous Superfamily: FepE-like (4)
(-)
Escherichia coli o157:h7. Organism_taxid: 83334. Strain: o157:h7. (2)
1a3b8oA01A:55-288,A:290-319
1b3b8oB01B:55-288,B:290-319
1c3b8oC01C:55-288,C:290-319
1d3b8oD01D:55-288,D:290-319
1e3b8oE01E:55-288,E:290-319
1f3b8oF01F:55-288,F:290-319
1g3b8oG01G:55-288,G:290-319
1h3b8oH01H:55-288,H:290-319

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3B8O)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (WZZE_ECO57 | P0AG01)
biological process
    GO:0009246    enterobacterial common antigen biosynthetic process    The chemical reactions and pathways resulting in the formation of the enterobacterial common antigen, an acidic polysaccharide containing N-acetyl-D-glucosamine, N-acetyl-D-mannosaminouronic acid, and 4-acetamido-4,6-dideoxy-D-galactose. A major component of the cell wall outer membrane of Gram-negative bacteria.
    GO:0009103    lipopolysaccharide biosynthetic process    The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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3b8m 3b8n 3b8p