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(-) Description

Title :  MACROPHAGE MIGRATION INHIBITORY FACTOR (MIF) FROM /LEISHMANIA MAJOR
 
Authors :  S. Zierow, Y. Cho, E. Lolis
Date :  27 Oct 07  (Deposition) - 10 Jun 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.03
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Cytokine, Leishmania, Macrophage Migration Inhibitory Factor, Mif, Lm1740Mif, Lmmif, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Kamir, S. Zierow, L. Leng, Y. Cho, Y. Diaz, J. Griffith, C. Mcdonald, M. Merk, R. A. Mitchell, J. Trent, Y. Chen, Y. K. Kwong, H. Xiong, J. Vermeire, M. Cappello, D. Mcmahon-Pratt, J. Walker, J. Bernhagen, E. Lolis, R. Bucala
A Leishmania Ortholog Of Macrophage Migration Inhibitory Factor Modulates Host Macrophage Responses.
J. Immunol. V. 180 8250 2008
PubMed-ID: 18523291
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MACROPHAGE MIGRATION INHIBITORY FACTOR-LIKE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PCRT7/CT-TOPO
    Expression System Strain: BL21
    Expression System Vector Type: PLASMID
    Organism Scientific: LEISHMANIA MAJOR

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1IPA1Ligand/IonISOPROPYL ALCOHOL
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1IPA3Ligand/IonISOPROPYL ALCOHOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:107 , THR A:110 , ASN A:111 , PHE A:112BINDING SITE FOR RESIDUE IPA A 113

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3B64)

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(no "Exon" information available for 3B64)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:112
 aligned with Q4Q413_LEIMA | Q4Q413 from UniProtKB/TrEMBL  Length:113

    Alignment length:112
                                    11        21        31        41        51        61        71        81        91       101       111  
         Q4Q413_LEIMA     2 PVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYFSPLHCGWNGTNF 113
               SCOP domains d3b64a_ A: automated matches                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....hhhhhhhhhhhhhhhhhhh...hhhhheeeee..............eeeeee.......hhhhhhhhhhhhhhhhhhh.hhh.eeeeee.....ee..ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 3b64 A   1 PVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYFSPLHCGWNGTNF 112
                                    10        20        30        40        50        60        70        80        90       100       110
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3B64)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q4Q413_LEIMA | Q4Q413: 3fwu 4nwr

(-) Related Entries Specified in the PDB File

1mif CRYSTAL STRUCTURE AT 2.6-A RESOLUTION OF HUMAN MACROPHAGE MIGRATION INHIBITORY FACTOR.
2os5 STRUCTURAL CHARACTERIZATION OF A MACROPHAGE MIGRATION INHIBITORY FACTOR FROM ANCYLOSTOMA HOOKWORMS: EVIDENCE FOR INTERACTION WITH HUMAN MIF RECEPTOR CD74