3B5H - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE EXTRACELLULAR PORTION OF HAB18G/CD147

Authors :   X. -L. Yu, Z. -N. Chen

Date :   26 Oct 07 (Deposition) - 06 May 08 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Ig-Like Domain, Cell Invasion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   X. L. Yu, T. Hu, J. M. Du, J. P. Ding, X. M. Yang, J. Zhang, B. Yang, X. Shen, Z. Zhang, W. D. Zhong, N. Wen, H. Jiang, P. Zhu, Z. N. Chen
Crystal Structure Of Hab18G/Cd147: Implications For Immunoglobulin Superfamily Homophilic Adhesion.
J. Biol. Chem. V. 283 18056 2008
PubMed-ID: 18430721 | Reference-DOI: 10.1074/JBC.M802694200

Molecule 1 - CERVICAL EMMPRIN
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21A(+)
	Expression System Strain	:	ORIGAMIB(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	EXTRACELLULAR PORTION, UNP RESIDUES 22-205
	Gene	:	BSG
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	HAB18G/CD147

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 1)

No.	Name	Count	Type	Full Name
1	ACT	1	Ligand/Ion	ACETATE ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	ACT	-1	Ligand/Ion	ACETATE ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	ACT	-1	Ligand/Ion	ACETATE ION

Biological Unit 3 (0, 0)

No.	Name	Count	Type	Full Name
1	ACT	-1	Ligand/Ion	ACETATE ION

Biological Unit 4 (1, 1)

No.	Name	Count	Type	Full Name
1	ACT	1	Ligand/Ion	ACETATE ION

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASN C:152 , SER D:162	BINDING SITE FOR RESIDUE ACT D 1001

Asymmetric Unit

No.	Residues
1	A:41	-	A:87
2	A:126	-	A:185
3	B:41	-	B:87
4	B:126	-	B:185
5	C:41	-	C:87
6	C:126	-	C:185
7	D:41	-	D:87
8	D:126	-	D:185

Asymmetric Unit

No.	Residues
1	Leu A:90	-	Pro A:91
2	Glu A:92	-	Pro A:93
3	Val A:131	-	Pro A:132
4	Leu B:90	-	Pro B:91
5	Glu B:92	-	Pro B:93
6	Val B:131	-	Pro B:132
7	Leu C:90	-	Pro C:91
8	Glu C:92	-	Pro C:93
9	Val C:131	-	Pro C:132
10	Leu D:90	-	Pro D:91
11	Glu D:92	-	Pro D:93
12	Val D:131	-	Pro D:132

Asymmetric Unit (2, 8)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_013574	E	208	K	BASI_HUMAN	Polymorphism	104894669	A/B/C/D	E	92	K
2	UniProt	VAR_011720	G	269	V	BASI_HUMAN	Polymorphism	1803203	A/B/C/D	G	153	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_013574	E	208	K	BASI_HUMAN	Polymorphism	104894669	A	E	92	K
2	UniProt	VAR_011720	G	269	V	BASI_HUMAN	Polymorphism	1803203	A	G	153	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_013574	E	208	K	BASI_HUMAN	Polymorphism	104894669	B	E	92	K
2	UniProt	VAR_011720	G	269	V	BASI_HUMAN	Polymorphism	1803203	B	G	153	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_013574	E	208	K	BASI_HUMAN	Polymorphism	104894669	C	E	92	K
2	UniProt	VAR_011720	G	269	V	BASI_HUMAN	Polymorphism	1803203	C	G	153	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_013574	E	208	K	BASI_HUMAN	Polymorphism	104894669	D	E	92	K
2	UniProt	VAR_011720	G	269	V	BASI_HUMAN	Polymorphism	1803203	D	G	153	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 3B5H)

(no "Exon" information available for 3B5H)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:181
 aligned with BASI_HUMAN | P35613 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:181
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318 
           BASI_HUMAN   139 PGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 319
               SCOP domains d3b5ha2 A:23-102 Cervical EMMPRIN                                               d3b5ha1 A:103-203 Cervical EMMPRIN                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeee.......eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee......ee...eeeee....eeeeee........eeeeee......ee...hhhh.eeeeee..eeeeee.........eeeeeeeee..eeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V-------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h A  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain A from PDB  Type:PROTEIN  Length:181
 aligned with Q54A51_HUMAN | Q54A51 from UniProtKB/TrEMBL  Length:269

    Alignment length:181
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202 
         Q54A51_HUMAN    23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
               SCOP domains d3b5ha2 A:23-102 Cervical EMMPRIN                                               d3b5ha1 A:103-203 Cervical EMMPRIN                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeee.......eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee......ee...eeeee....eeeeee........eeeeee......ee...hhhh.eeeeee..eeeeee.........eeeeeeeee..eeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V-------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h A  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain B from PDB  Type:PROTEIN  Length:181
 aligned with BASI_HUMAN | P35613 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:181
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318 
           BASI_HUMAN   139 PGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 319
               SCOP domains d3b5hb2 B:23-102 Cervical EMMPRIN                                               d3b5hb1 B:103-203 Cervical EMMPRIN                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee....eeeeeeee.......eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee.....eee...eeee.....eeeeeee.......eeeeeee....eee...hhhh.eeeeee..eeeeee.........eeeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V-------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h B  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain B from PDB  Type:PROTEIN  Length:181
 aligned with Q54A51_HUMAN | Q54A51 from UniProtKB/TrEMBL  Length:269

    Alignment length:181
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202 
         Q54A51_HUMAN    23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
               SCOP domains d3b5hb2 B:23-102 Cervical EMMPRIN                                               d3b5hb1 B:103-203 Cervical EMMPRIN                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee....eeeeeeee.......eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee.....eee...eeee.....eeeeeee.......eeeeeee....eee...hhhh.eeeeee..eeeeee.........eeeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V-------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h B  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 203
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain C from PDB  Type:PROTEIN  Length:180
 aligned with BASI_HUMAN | P35613 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:180
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318
           BASI_HUMAN   139 PGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 318
               SCOP domains d3b5hc2 C:23-102 Cervical EMMPRIN                                               d3b5hc1 C:103-202 Cervical EMMPRIN                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeeeee........eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee......ee...ee......eeeeeee........eeeeeee.....ee...hhhh.eeeeee..eeeeeee........eeeeeeeee..eee..eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3b5h C  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 202
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain C from PDB  Type:PROTEIN  Length:180
 aligned with Q54A51_HUMAN | Q54A51 from UniProtKB/TrEMBL  Length:269

    Alignment length:180
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202
         Q54A51_HUMAN    23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 202
               SCOP domains d3b5hc2 C:23-102 Cervical EMMPRIN                                               d3b5hc1 C:103-202 Cervical EMMPRIN                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeeeee........eeeee...eeee.......eeeeeehhhhh.eeeeeeee....eeeeeee......ee...ee......eeeeeee........eeeeeee.....ee...hhhh.eeeeee..eeeeeee........eeeeeeeee..eee..eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3b5h C  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 202
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202

Chain D from PDB  Type:PROTEIN  Length:179
 aligned with BASI_HUMAN | P35613 from UniProtKB/Swiss-Prot  Length:385

    Alignment length:179
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308         
           BASI_HUMAN   139 PGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 317
               SCOP domains d3b5hd2 D:23-102 Cervical EMMPRIN                                               d3b5hd1 D:103-201 Cervical EMMPRIN                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee...eeeeeeeee.......eeeee...eeee.......eeeeeee.hhh..eeeeeee.....eeeee......eee...ee.......eeeeeee.......eeeeeee....eee...hhhh.eeeee...eeeeee..........eeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h D  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 201
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192

Chain D from PDB  Type:PROTEIN  Length:179
 aligned with Q54A51_HUMAN | Q54A51 from UniProtKB/TrEMBL  Length:269

    Alignment length:179
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192         
         Q54A51_HUMAN    23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 201
               SCOP domains d3b5hd2 D:23-102 Cervical EMMPRIN                                               d3b5hd1 D:103-201 Cervical EMMPRIN                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee...eeeeeeeee.......eeeee...eeee.......eeeeeee.hhh..eeeeeee.....eeeee......eee...ee.......eeeeeee.......eeeeeee....eee...hhhh.eeeee...eeeeee..........eeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------K------------------------------------------------------------V------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3b5h D  23 AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 201
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Immunoglobulin-like beta-sandwich (7299)

Superfamily: Immunoglobulin (5995)

Family: I set domains (152)

Protein domain: Cervical EMMPRIN (1)

Human (Homo sapiens) [TaxId: 9606] (1)

1a	d3b5ha1	A:103-203
1b	d3b5ha2	A:23-102
1c	d3b5hb1	B:103-203
1d	d3b5hb2	B:23-102
1e	d3b5hc1	C:103-202
1f	d3b5hc2	C:23-102
1g	d3b5hd1	D:103-201
1h	d3b5hd2	D:23-102

(no "CATH Domain" information available for 3B5H)

(no "Pfam Domain" information available for 3B5H)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (Q54A51_HUMAN | Q54A51)

cellular component
	GO:0016021		integral component of membrane		The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020		membrane		A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain A,B,C,D (BASI_HUMAN | P35613)

molecular function
	GO:0030246	carbohydrate binding	Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
	GO:0005537	mannose binding	Interacting selectively and non-covalently with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.
	GO:0008028	monocarboxylic acid transmembrane transporter activity	Enables the transfer of monocarboxylic acids from one side of the membrane to the other. A monocarboxylic acid is an organic acid with one COOH group.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0007166	cell surface receptor signaling pathway	A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
	GO:0046697	decidualization	The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta.
	GO:0007566	embryo implantation	Attachment of the blastocyst to the uterine lining.
	GO:0022617	extracellular matrix disassembly	A process that results in the breakdown of the extracellular matrix.
	GO:0030198	extracellular matrix organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
	GO:0050900	leukocyte migration	The movement of a leukocyte within or between different tissues and organs of the body.
	GO:0015718	monocarboxylic acid transport	The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0042475	odontogenesis of dentin-containing tooth	The process whose specific outcome is the progression of a dentin-containing tooth over time, from its formation to the mature structure. A dentin-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and is composed mainly of dentin, a dense calcified substance, covered by a layer of enamel.
	GO:0072661	protein targeting to plasma membrane	The process of directing proteins towards the plasma membrane; usually uses signals contained within the protein.
	GO:0006090	pyruvate metabolic process	The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.
	GO:0051591	response to cAMP	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.
	GO:0046689	response to mercury ion	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercury ion stimulus.
	GO:0043434	response to peptide hormone	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.
cellular component
	GO:0000139	Golgi membrane	The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
	GO:0002080	acrosomal membrane	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005887	integral component of plasma membrane	The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0042470	melanosome	A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0042383	sarcolemma	The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.

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	3b5h
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	Q54A51_HUMAN \| Q54A51
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	BASI_HUMAN \| P35613	:	3i84 3i85 3qqn 3qr2 4u0q
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(no "Related Entries Specified in the PDB File" available for 3B5H)

Description

Compounds

Structural Features

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Ligands, Modified Residues, Ions (1, 1)

Sites (1, 1)

SS Bonds (8, 8)

Cis Peptide Bonds (12, 12)

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