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(-) Description

Title :  CRYSTAL STRUCTURE OF ACTIN CAPPING PROTEIN IN COMPLEX WITH CARMIL FRAGMENT
 
Authors :  S. Takeda, S. Minakata, A. Narita, M. Kitazawa, T. Yamakuni, Y. Maeda, Y
Date :  16 Nov 09  (Deposition) - 17 Nov 10  (Release) - 17 Nov 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,V,W,X,Y,Z
Biol. Unit 1:  A,B,X  (1x)
Biol. Unit 2:  C,D,Y  (1x)
Biol. Unit 3:  E,F,Z  (1x)
Biol. Unit 4:  G,H,W  (1x)
Biol. Unit 5:  I,J,V  (1x)
Keywords :  Actin Capping Protein, Barbed End Regulation, Carmil Family Protein, Conformational Change, Cell Motility, Actin Capping, Actin-Binding, Cytoskeleton, Isopeptide Bond, Leucine-Rich Repeat, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Takeda, S. Minakata, A. Narita, M. Kitazawa, T. Yamakuni, Y. Maeda, Y. Nitanai
Two Distinct Mechanisms For The Regulation Of Actin Capping Protein-Competitive Or Allosteric Inhibitions
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA-1
    ChainsA, C, E, G, I
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPETDUET1
    Expression System StrainROSETTA2 (DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCAPZA1
    Organism CommonCHICKEN
    Organism ScientificGALLUS GALLUS
    Organism Taxid9031
    SynonymCAPZ 36/32, BETA-ACTININ SUBUNIT I
 
Molecule 2 - F-ACTIN-CAPPING PROTEIN SUBUNIT BETA ISOFORMS 1 AND 2
    ChainsB, D, F, H, J
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPETDUET1
    Expression System StrainROSETTA2 (DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCAPZB
    Organism CommonCHICKEN
    Organism ScientificGALLUS GALLUS
    Organism Taxid9031
    SynonymCAPZ B1 AND B2, CAPZ 36/32, BETA-ACTININ SUBUNIT II
 
Molecule 3 - 32MER PEPTIDE FROM LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16A
    ChainsX, Y, Z, W, V
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX6P1
    Expression System StrainROSETTA2 (DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentCP-BINDING MOTIF, RESIDUES 971-1002
    GeneLRRC16A
    Organism CommonMOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    SynonymCARMIL, CAPPING PROTEIN ARP2/3 MYOSIN I LINKER, CARMIL HOMOLOG

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric Unit ABCDEFGHIJVWXYZ
Biological Unit 1 (1x)AB          X  
Biological Unit 2 (1x)  CD         Y 
Biological Unit 3 (1x)    EF        Z
Biological Unit 4 (1x)      GH   W   
Biological Unit 5 (1x)        IJV    

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3AAE)

(-) Sites  (0, 0)

(no "Site" information available for 3AAE)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3AAE)

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1Asp A:71 -Asp A:72
2Pro A:183 -Pro A:184
3Asp B:80 -Pro B:81
4Asp C:71 -Asp C:72
5Pro C:183 -Pro C:184
6Asp D:80 -Pro D:81
7Asp E:71 -Asp E:72
8Pro E:183 -Pro E:184
9Asp F:80 -Pro F:81
10Asp G:71 -Asp G:72
11Pro G:183 -Pro G:184
12Asp H:80 -Pro H:81
13Asp I:71 -Asp I:72
14Pro I:183 -Pro I:184
15Asp J:80 -Pro J:81
16Leu X:974 -Ile X:975

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 5)

Asymmetric Unit (1, 5)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---A/C/E/G/IF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (1, 1)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---AF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (1, 1)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---CF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (1, 1)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---EF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (1, 1)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---GF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 5 (1, 1)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CAZA1_CHICK_001 *F163ICAZA1_CHICK  ---  ---IF163I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (3, 15)

Asymmetric Unit (3, 15)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  5B:62-67
D:62-67
F:62-67
H:62-67
J:62-67
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  5A:196-204
C:196-204
E:196-204
G:196-204
I:196-204
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  5A:256-266
C:256-266
E:256-266
G:256-266
I:256-266
Biological Unit 1 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  1B:62-67
-
-
-
-
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  1A:196-204
-
-
-
-
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  1A:256-266
-
-
-
-
Biological Unit 2 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  1-
D:62-67
-
-
-
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  1-
C:196-204
-
-
-
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  1-
C:256-266
-
-
-
Biological Unit 3 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  1-
-
F:62-67
-
-
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  1-
-
E:196-204
-
-
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  1-
-
E:256-266
-
-
Biological Unit 4 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  1-
-
-
H:62-67
-
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  1-
-
-
G:196-204
-
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  1-
-
-
G:256-266
-
Biological Unit 5 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1F_ACTIN_CAPPING_BETAPS00231 F-actin capping protein beta subunit signature.CAPZB_CHICK62-67
 
 
 
 
  1-
-
-
-
J:62-67
2F_ACTIN_CAPPING_A_1PS00748 F-actin capping protein alpha subunit signature 1.CAZA1_CHICK196-204
 
 
 
 
  1-
-
-
-
I:196-204
3F_ACTIN_CAPPING_A_2PS00749 F-actin capping protein alpha subunit signature 2.CAZA1_CHICK256-266
 
 
 
 
  1-
-
-
-
I:256-266

(-) Exons   (9, 45)

Asymmetric Unit (9, 45)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2aENSGALT000000064252aENSGALE00000042043chr21:4747591-474750191CAPZB_CHICK1-30305B:3-30
D:3-30
F:3-30
H:3-30
J:3-30
28
28
28
28
28
1.3ENSGALT000000064253ENSGALE00000042051chr21:4734482-4734361122CAPZB_CHICK31-71415B:31-71
D:31-71
F:31-71
H:31-71
J:31-71
41
41
41
41
41
1.4ENSGALT000000064254ENSGALE00000042045chr21:4723866-4723753114CAPZB_CHICK71-109395B:71-109
D:71-109
F:71-109
H:71-109
J:71-109
39
39
39
39
39
1.5ENSGALT000000064255ENSGALE00000042044chr21:4709816-4709675142CAPZB_CHICK109-156485B:109-156
D:109-156
F:109-156
H:109-156
J:109-156
48
48
48
48
48
1.6ENSGALT000000064256ENSGALE00000042049chr21:4709146-4709030117CAPZB_CHICK157-195395B:157-195
D:157-195
F:157-195
H:157-195
J:157-195
39
39
39
39
39
1.7ENSGALT000000064257ENSGALE00000042042chr21:4702101-470203666CAPZB_CHICK196-217225B:196-217
D:196-217
F:196-217
H:196-217
J:196-217
22
22
22
22
22
1.8ENSGALT000000064258ENSGALE00000042048chr21:4701227-470115177CAPZB_CHICK218-243265B:218-243
D:218-243
F:218-243
H:218-243
J:218-243
26
26
26
26
26
1.9ENSGALT000000064259ENSGALE00000042047chr21:4699862-4699750113CAPZB_CHICK243-276345B:243-266
D:243-266
F:243-252
H:243-251
J:243-251
24
24
10
9
9
1.10aENSGALT0000000642510aENSGALE00000042050chr21:4697971-4697725247CAPZB_CHICK-00--

2.1aENSMUST000000728891aENSMUSE00000912403chr13:24372664-24372430235CARL1_MOUSE1-14140--
2.3ENSMUST000000728893ENSMUSE00000413275chr13:24368423-2436832698CARL1_MOUSE14-46330--
2.6ENSMUST000000728896ENSMUSE00000370559chr13:24270126-2427007651CARL1_MOUSE47-63170--
2.7bENSMUST000000728897bENSMUSE00000413785chr13:24265544-2426548560CARL1_MOUSE64-83200--
2.8bENSMUST000000728898bENSMUSE00000337149chr13:24256791-24256670122CARL1_MOUSE84-124410--
2.9bENSMUST000000728899bENSMUSE00000380434chr13:24247356-2424725998CARL1_MOUSE124-157340--
2.11ENSMUST0000007288911ENSMUSE00000399014chr13:24246923-2424685371CARL1_MOUSE157-180240--
2.12ENSMUST0000007288912ENSMUSE00000355440chr13:24246620-2424654774CARL1_MOUSE181-205250--
2.13ENSMUST0000007288913ENSMUSE00000571498chr13:24233600-2423352576CARL1_MOUSE205-230260--
2.14aENSMUST0000007288914aENSMUSE00000571497chr13:24231246-2423115889CARL1_MOUSE231-260300--
2.15ENSMUST0000007288915ENSMUSE00000571496chr13:24229100-2422900695CARL1_MOUSE260-292330--
2.16ENSMUST0000007288916ENSMUSE00000571495chr13:24213794-2421370887CARL1_MOUSE292-321300--
2.17ENSMUST0000007288917ENSMUSE00000571494chr13:24207447-24207344104CARL1_MOUSE321-355350--
2.19ENSMUST0000007288919ENSMUSE00000571493chr13:24203960-2420388378CARL1_MOUSE356-381260--
2.20ENSMUST0000007288920ENSMUSE00000571492chr13:24203755-2420367977CARL1_MOUSE382-407260--
2.21bENSMUST0000007288921bENSMUSE00000862598chr13:24200463-24200359105CARL1_MOUSE407-442360--
2.22ENSMUST0000007288922ENSMUSE00000617391chr13:24198247-2419817870CARL1_MOUSE442-465240--
2.23ENSMUST0000007288923ENSMUSE00000683869chr13:24193952-2419394112CARL1_MOUSE466-46940--
2.26aENSMUST0000007288926aENSMUSE00000896395chr13:24191532-2419145182CARL1_MOUSE470-497280--
2.27ENSMUST0000007288927ENSMUSE00000617388chr13:24190929-24190830100CARL1_MOUSE497-530340--
2.28ENSMUST0000007288928ENSMUSE00000643068chr13:24190729-2419067555CARL1_MOUSE530-548190--
2.29aENSMUST0000007288929aENSMUSE00000643067chr13:24186439-24186267173CARL1_MOUSE549-606580--
2.30ENSMUST0000007288930ENSMUSE00000643065chr13:24184443-2418437569CARL1_MOUSE606-629240--
2.31ENSMUST0000007288931ENSMUSE00000643062chr13:24180940-2418084794CARL1_MOUSE629-660320--
2.32ENSMUST0000007288932ENSMUSE00000643060chr13:24173896-2417379899CARL1_MOUSE661-693330--
2.33ENSMUST0000007288933ENSMUSE00000643058chr13:24167609-24167481129CARL1_MOUSE694-736430--
2.34ENSMUST0000007288934ENSMUSE00000643057chr13:24165940-24165809132CARL1_MOUSE737-780440--
2.35ENSMUST0000007288935ENSMUSE00000643055chr13:24161675-24161500176CARL1_MOUSE781-839590--
2.36ENSMUST0000007288936ENSMUSE00000643053chr13:24159088-2415900188CARL1_MOUSE839-868300--
2.37aENSMUST0000007288937aENSMUSE00000643052chr13:24156595-24156446150CARL1_MOUSE869-918500--
2.40ENSMUST0000007288940ENSMUSE00000643049chr13:24136951-2413688567CARL1_MOUSE919-941230--
2.41ENSMUST0000007288941ENSMUSE00000643046chr13:24136239-24136043197CARL1_MOUSE941-1006665V:978-998
W:977-1002
X:974-1002
Y:975-1002
Z:975-1002
21
26
29
28
28
2.42ENSMUST0000007288942ENSMUSE00000643045chr13:24133654-24133542113CARL1_MOUSE1007-1044380--
2.43bENSMUST0000007288943bENSMUSE00000643044chr13:24128477-24128054424CARL1_MOUSE1044-11851420--
2.44ENSMUST0000007288944ENSMUSE00000643043chr13:24117804-2411772382CARL1_MOUSE1186-1213280--
2.45ENSMUST0000007288945ENSMUSE00000643042chr13:24116404-24116192213CARL1_MOUSE1213-1284720--
2.46aENSMUST0000007288946aENSMUSE00000643041chr13:24114505-24114365141CARL1_MOUSE1284-1331480--
2.49cENSMUST0000007288949cENSMUSE00000478715chr13:24105329-24104528802CARL1_MOUSE1331-1374440--

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:270
 aligned with CAZA1_CHICK | P13127 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:270
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
         CAZA1_CHICK      7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........eee.........eeee....eeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeeeeeehhh.eeeeeeeeeeeeee..eeeeeeeeeeeeee...eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F_ACTIN_C---------------------------------------------------F_ACTIN_CAP---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3aae A    7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276

Chain B from PDB  Type:PROTEIN  Length:264
 aligned with CAPZB_CHICK | P14315 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:264
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262    
         CAPZB_CHICK      3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKYKQLQRELSQVL  266
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh....eeeee....eeeeehhh.ee..eee......ee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeeeee.......eeeeeeeeeeeeee.....eeeeeeeeeeeeeeee.hhhhheeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------F_ACTI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2a  PDB: B:3-30      Exon 1.3  PDB: B:31-71 UniProt: 31-71    -------------------------------------Exon 1.5  PDB: B:109-156 UniProt: 109-156       Exon 1.6  PDB: B:157-195               Exon 1.7              Exon 1.8  PDB: B:218-243  ----------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------Exon 1.4  PDB: B:71-109 UniProt: 71-109-------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:243-266 Transcript 1 (2)
                3aae B    3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKYKQLQRELSQVL  266
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262    

Chain C from PDB  Type:PROTEIN  Length:270
 aligned with CAZA1_CHICK | P13127 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:270
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
         CAZA1_CHICK      7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........eee.........eeee....eeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeeeeeehhh.eeeeeeeeeeeeee..eeeeeeeeeeeeee...eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F_ACTIN_C---------------------------------------------------F_ACTIN_CAP---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3aae C    7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276

Chain D from PDB  Type:PROTEIN  Length:264
 aligned with CAPZB_CHICK | P14315 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:264
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262    
         CAPZB_CHICK      3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKYKQLQRELSQVL  266
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh....eeeee....eeeeehhh.ee..eee......ee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeeeee.......eeeeeeeeeeeeee.....eeeeeeeeeeeeeeee.hhhhheeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhh..hhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------F_ACTI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2a  PDB: D:3-30      Exon 1.3  PDB: D:31-71 UniProt: 31-71    -------------------------------------Exon 1.5  PDB: D:109-156 UniProt: 109-156       Exon 1.6  PDB: D:157-195               Exon 1.7              Exon 1.8  PDB: D:218-243  ----------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------Exon 1.4  PDB: D:71-109 UniProt: 71-109-------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: D:243-266 Transcript 1 (2)
                3aae D    3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKYKQLQRELSQVL  266
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262    

Chain E from PDB  Type:PROTEIN  Length:270
 aligned with CAZA1_CHICK | P13127 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:270
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
         CAZA1_CHICK      7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........eee.........eeee....eeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeeeeeehhh.eeeeeeeeeeeeee..eeeeeeeeeeeeee...eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F_ACTIN_C---------------------------------------------------F_ACTIN_CAP---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3aae E    7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276

Chain F from PDB  Type:PROTEIN  Length:250
 aligned with CAPZB_CHICK | P14315 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:250
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252
         CAPZB_CHICK      3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDN  252
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh....eeeee....eeeeehhh.ee..eee......ee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeeeee.......eeeeeeeeeeeeee.....eeeeeeeeeeeeeeee.hhhhheeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------F_ACTI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2a  PDB: F:3-30      Exon 1.3  PDB: F:31-71 UniProt: 31-71    -------------------------------------Exon 1.5  PDB: F:109-156 UniProt: 109-156       Exon 1.6  PDB: F:157-195               Exon 1.7              Exon 1.8  PDB: F:218-243  --------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------Exon 1.4  PDB: F:71-109 UniProt: 71-109-------------------------------------------------------------------------------------------------------------------------------------Exon 1.9   Transcript 1 (2)
                3aae F    3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDN  252
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252

Chain G from PDB  Type:PROTEIN  Length:270
 aligned with CAZA1_CHICK | P13127 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:270
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
         CAZA1_CHICK      7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........eee.........eeee....eeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeeeeeehhh.eeeeeeeeeeeeee..eeeeeeeeeeeeee...eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F_ACTIN_C---------------------------------------------------F_ACTIN_CAP---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3aae G    7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276

Chain H from PDB  Type:PROTEIN  Length:249
 aligned with CAPZB_CHICK | P14315 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:249
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242         
         CAPZB_CHICK      3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPD  251
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh....eeeee....eeeeehhh.ee..eee......ee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeeeee.......eeeeeeeeeeeeee.....eeeeeeeeeeeeeeee.hhhhheeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------F_ACTI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2a  PDB: H:3-30      Exon 1.3  PDB: H:31-71 UniProt: 31-71    -------------------------------------Exon 1.5  PDB: H:109-156 UniProt: 109-156       Exon 1.6  PDB: H:157-195               Exon 1.7              Exon 1.8  PDB: H:218-243  -------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------Exon 1.4  PDB: H:71-109 UniProt: 71-109-------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  Transcript 1 (2)
                3aae H    3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPD  251
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242         

Chain I from PDB  Type:PROTEIN  Length:270
 aligned with CAZA1_CHICK | P13127 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:270
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
         CAZA1_CHICK      7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee........eee.........eeee....eeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeeeeeehhh.eeeeeeeeeeeeee..eeeeeeeeeeeeee...eeeeeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------I----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F_ACTIN_C---------------------------------------------------F_ACTIN_CAP---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3aae I    7 RVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS  276
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276

Chain J from PDB  Type:PROTEIN  Length:249
 aligned with CAPZB_CHICK | P14315 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:249
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242         
         CAPZB_CHICK      3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPD  251
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh....eeeee....eeeeehhh.ee..eee......ee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeeeee.......eeeeeeeeeeeeee.....eeeeeeeeeeeeeeee.hhhhheeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------F_ACTI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2a  PDB: J:3-30      Exon 1.3  PDB: J:31-71 UniProt: 31-71    -------------------------------------Exon 1.5  PDB: J:109-156 UniProt: 109-156       Exon 1.6  PDB: J:157-195               Exon 1.7              Exon 1.8  PDB: J:218-243  -------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------Exon 1.4  PDB: J:71-109 UniProt: 71-109-------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  Transcript 1 (2)
                3aae J    3 DQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPD  251
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242         

Chain V from PDB  Type:PROTEIN  Length:21
 aligned with CARL1_MOUSE | Q6EDY6 from UniProtKB/Swiss-Prot  Length:1374

    Alignment length:21
                                   987       997 
         CARL1_MOUSE    978 LPSEEGRRLEHFTKLRPKRNK  998
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author ..........hhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
               Transcript 2 Exon 2.41             Transcript 2
                3aae V  978 LPSEEGRRLEHFTKLRPKRNK  998
                                   987       997 

Chain W from PDB  Type:PROTEIN  Length:26
 aligned with CARL1_MOUSE | Q6EDY6 from UniProtKB/Swiss-Prot  Length:1374

    Alignment length:26
                                   986       996      
         CARL1_MOUSE    977 ELPSEEGRRLEHFTKLRPKRNKKQQP 1002
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
               Transcript 2 Exon 2.41  PDB: W:977-1002 Transcript 2
                3aae W  977 ELPSEEGRRLEHFTKLRPKRNKKQQP 1002
                                   986       996      

Chain X from PDB  Type:PROTEIN  Length:29
 aligned with CARL1_MOUSE | Q6EDY6 from UniProtKB/Swiss-Prot  Length:1374

    Alignment length:29
                                   983       993         
         CARL1_MOUSE    974 LISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
               SCOP domains ----------------------------- SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author ............................. Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
               Transcript 2 Exon 2.41  PDB: X:974-1002    Transcript 2
                3aae X  974 LISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
                                   983       993         

Chain Y from PDB  Type:PROTEIN  Length:28
 aligned with CARL1_MOUSE | Q6EDY6 from UniProtKB/Swiss-Prot  Length:1374

    Alignment length:28
                                   984       994        
         CARL1_MOUSE    975 ISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author ............................ Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
               Transcript 2 Exon 2.41  PDB: Y:975-1002   Transcript 2
                3aae Y  975 ISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
                                   984       994        

Chain Z from PDB  Type:PROTEIN  Length:28
 aligned with CARL1_MOUSE | Q6EDY6 from UniProtKB/Swiss-Prot  Length:1374

    Alignment length:28
                                   984       994        
         CARL1_MOUSE    975 ISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author .............hhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
               Transcript 2 Exon 2.41  PDB: Z:975-1002   Transcript 2
                3aae Z  975 ISELPSEEGRRLEHFTKLRPKRNKKQQP 1002
                                   984       994        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3AAE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3AAE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3AAE)

(-) Gene Ontology  (53, 66)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I   (CAZA1_CHICK | P13127)
molecular function
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
biological process
    GO:0051693    actin filament capping    The binding of a protein or protein complex to the end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.
    GO:0051016    barbed-end actin filament capping    The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.
cellular component
    GO:0008290    F-actin capping protein complex    A heterodimer consisting of alpha and beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments.
    GO:0071203    WASH complex    A protein complex that localizes at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization. In human, the WASH complex is composed of F-actin-capping protein subunits alpha and beta, WASH1, FAM21, KIAA1033, KIAA0196 and CCDC53.
    GO:0030018    Z disc    Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

Chain B,D,F,H,J   (CAPZB_CHICK | P14315)
molecular function
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0051015    actin filament binding    Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
    GO:0048487    beta-tubulin binding    Interacting selectively and non-covalently with the microtubule constituent protein beta-tubulin.
biological process
    GO:0030036    actin cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0051693    actin filament capping    The binding of a protein or protein complex to the end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.
    GO:0051016    barbed-end actin filament capping    The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.
    GO:0000902    cell morphogenesis    The developmental process in which the size or shape of a cell is generated and organized.
    GO:0030030    cell projection organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0007010    cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
    GO:0030032    lamellipodium assembly    Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
    GO:0048747    muscle fiber development    The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. In skeletal muscle, fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
    GO:0051490    negative regulation of filopodium assembly    Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
    GO:0031115    negative regulation of microtubule polymerization    Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
    GO:0031175    neuron projection development    The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:0022604    regulation of cell morphogenesis    Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.
    GO:0010591    regulation of lamellipodium assembly    Any process that modulates the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
    GO:0090036    regulation of protein kinase C signaling    Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.
cellular component
    GO:0008290    F-actin capping protein complex    A heterodimer consisting of alpha and beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments.
    GO:0031674    I band    A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.
    GO:0030018    Z disc    Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
    GO:0001669    acrosomal vesicle    A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome.
    GO:0005884    actin filament    A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
    GO:0005903    brush border    The dense covering of microvilli on the apical surface of a epithelial cells in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell.
    GO:0030863    cortical cytoskeleton    The portion of the cytoskeleton that lies just beneath the plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0014704    intercalated disc    A complex cell-cell junction at which myofibrils terminate in cardiomyocytes; mediates mechanical and electrochemical integration between individual cardiomyocytes. The intercalated disc contains regions of tight mechanical attachment (fasciae adherentes and desmosomes) and electrical coupling (gap junctions) between adjacent cells.
    GO:0030027    lamellipodium    A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain V,W,X,Y,Z   (CARL1_MOUSE | Q6EDY6)
molecular function
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0051639    actin filament network formation    The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments.
    GO:0051638    barbed-end actin filament uncapping    The removal of capping protein from the barbed (or plus) end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.
    GO:0016477    cell migration    The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.
    GO:0007163    establishment or maintenance of cell polarity    Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.
    GO:0030032    lamellipodium assembly    Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
    GO:0044351    macropinocytosis    An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.
    GO:2000813    negative regulation of barbed-end actin filament capping    Any process that stops, prevents or reduces the frequency, rate or extent of barbed-end actin filament capping.
    GO:0030838    positive regulation of actin filament polymerization    Any process that activates or increases the frequency, rate or extent of actin polymerization.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:1902745    positive regulation of lamellipodium organization    Any process that activates or increases the frequency, rate or extent of lamellipodium organization.
    GO:0051496    positive regulation of stress fiber assembly    Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.
    GO:1900026    positive regulation of substrate adhesion-dependent cell spreading    Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.
    GO:0031529    ruffle organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell.
    GO:0046415    urate metabolic process    The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.
cellular component
    GO:0031252    cell leading edge    The area of a motile cell closest to the direction of movement.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0031941    filamentous actin    A two-stranded helical polymer of the protein actin.
    GO:0045111    intermediate filament cytoskeleton    Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.
    GO:0030027    lamellipodium    A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
    GO:0044354    macropinosome    A membrane-bounded, uncoated intracellular vesicle formed by the process of macropinocytosis.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CAPZB_CHICK | P143151izn 2kxp 2kz7 3aa0 3aa1 3aa6 3aa7 3aaa 3lk2 3lk3 3lk4
        CARL1_MOUSE | Q6EDY62kz7 3aa0 4k17
        CAZA1_CHICK | P131271izn 2kxp 2kz7 3aa0 3aa1 3aa6 3aa7 3aaa 3lk2 3lk3 3lk4

(-) Related Entries Specified in the PDB File

1izn THE SAME PROTEIN IN APO-FORM
3aa0 THE SAME PROTEIN IN COMPLEXED WITH THE 21 AA LENGTH CARMIL FRAGMENT
3aa1 THE SAME PROTEIN IN COMPLEXED WITH THE 23 AA LENGTH CKIP-1 FRAGMENT
3aa6 THE SAME PROTEIN IN COMPLEXED WITH THE 23 AA LENGTH CD2AP FRAGMENT
3aa7 THE SAME PROTEIN IN APO-FORM
3aaa THE SAME PROTEIN IN COMPLEXED WITH V-1