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(-) Description

Title :  THREE-DIMENSIONAL STRUCTURE AND REACTIVITY OF A PHOTOCHEMICAL CLEAVAGE AGENT BOUND TO DNA
 
Authors :  S. M. Gasper, B. Armitage, X. Shui, G. G. Hu, C. Yu, G. Schuster, L. D. Williams
Date :  11 Mar 98  (Deposition) - 12 Mar 98  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Right Handed Dna, Double Helix, Complexed With Drug (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Gasper, B. Armitage, X. Shui, G. G. Hu, C. Yu, G. Schuster, L. D. Williams
Three-Dimensional Structure And Reactivity Of A Photochemical Cleavage Agent Bound To Dna
J. Am. Chem. Soc. V. 120 12402 1998
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
    Chains: A
    Engineered: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1AQS1Ligand/IonN,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1AQS2Ligand/IonN,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDC A:1 , DG A:2 , DA A:4 , DC A:5 , DG A:6 , HOH A:36BINDING SITE FOR RESIDUE AQS A 7

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 386D)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

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Chain A from PDB  Type:DNA  Length:6
                                    
                   386d A 1 CGTACG 6
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 386D)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 386D)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  386d
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

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