2ZW6 - JenaLib

Title :   CRYSTAL STRUCTURE OF BLEOMYCIN N-ACETYLTRANSFERASE FROM BLEOMYCIN-PRODUCING STREPTOMYCES VERTICILLUS ATCC15003

Authors :   K. Oda, Y. Matoba, M. Sugiyama

Date :   01 Dec 08 (Deposition) - 03 Nov 09 (Release) - 02 Feb 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym./Biol. Unit : A,B

Keywords :   Dimer, Two Domains, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Oda, Y. Matoba, M. Noda, T. Kumagai, M. Sugiyama
Catalytic Mechanism Of Bleomycin N-Acetyltransferase Proposed On The Basis Of Its Crystal Structure.
J. Biol. Chem. V. 285 1446 2010
PubMed-ID: 19889644 | Reference-DOI: 10.1074/JBC.M109.022277

Compounds

Molecule 1 - BLEOMYCIN ACETYLTRANSFERASE
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-21A(+)
	Expression System Strain	:	B834(DE3)PLYSS
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	BLMB
	Organism Scientific	:	STREPTOMYCES VERTICILLUS
	Organism Taxid	:	29309
	Strain	:	ATCC15003

Structural Features

Chains, Units

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 4)

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LEU A:99 , GLY A:105 , HIS A:106 , GLY A:107 , TYR A:108 , ALA A:109 , THR A:110 , ARG A:139 , VAL A:143	BINDING SITE FOR RESIDUE SO4 A 401
2	AC2	SOFTWARE	ARG A:16 , HIS A:106 , TYR A:108 , HIS B:30	BINDING SITE FOR RESIDUE SO4 A 402
3	AC3	SOFTWARE	ARG A:46 , ARG A:57 , TYR A:58 , ARG B:46 , GLU B:54 , ARG B:57	BINDING SITE FOR RESIDUE SO4 A 404
4	AC4	SOFTWARE	GLY B:105 , HIS B:106 , GLY B:107 , TYR B:108 , ALA B:109 , THR B:110 , HOH B:435	BINDING SITE FOR RESIDUE SO4 B 403

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:297
 aligned with Q53796_9ACTN | Q53796 from UniProtKB/TrEMBL  Length:301

    Alignment length:297
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       
         Q53796_9ACTN     5 PRAHTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAPV 301
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....eeee.hhhhhhhhhhhhhh..............hhhhhhhhhhhhhhh...eeeeee.......eeeee.........eeee.hhhh..hhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhh.eeeeeeee........eeeeeeeee......eeeeeeeeeee.hhhhhhhhhhhhh..eeeeee.....eeeee........eeeeee..........eeeeeee.hhhhhhhhhhhh........ee.....eeeeee.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zw6 A   5 PRAHTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAPV 301
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294

Chain B from PDB  Type:PROTEIN  Length:294
 aligned with Q53796_9ACTN | Q53796 from UniProtKB/TrEMBL  Length:301

    Alignment length:294
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297    
         Q53796_9ACTN     8 HTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAPV 301
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eee..eeeee.hhhhhhhhhhhhhh..hhhhh.......hhhhhhhhhhhhhhh...eeeeee.......eeeee........eeeee.......hhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhh..eeeeeeee........eeeeeeeee......eeeeeeeeeee.hhhhhhhhhhhhh..eeeee......eeeee........eeeeee..........eeeeeee.hhhhhhhhhhh................eeeeee.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2zw6 B   8 HTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAPV 301
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (2, 2)

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	Cis Peptide Bonds
		Asp B:215 - Pro B:216	[ RasMol ]
		Gly B:240 - Pro B:241	[ RasMol ]

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