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(-) Description

Title :  CRYSTAL STRUCTURE OF GALACTO-N-BIOSE/LACTO-N-BIOSE I PHOSPHORYLASE IN COMPLEX WITH GALNAC
 
Authors :  M. Hidaka, M. Nishimoto, M. Kitaoka, T. Wakagi, H. Shoun, S. Fushinobu
Date :  28 Oct 08  (Deposition) - 30 Dec 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Beta-Alpha-Barrel, Tim Barrel, Glycosyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hidaka, M. Nishimoto, M. Kitaoka, T. Wakagi, H. Shoun, S. Fushinobu
The Crystal Structure Of Galacto-N-Biose/Lacto-N-Biose I Phosphorylase: A Large Deformation Of A Tim Barrel Scaffold
J. Biol. Chem. V. 284 7273 2009
PubMed-ID: 19124470  |  Reference-DOI: 10.1074/JBC.M808525200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - LACTO-N-BIOSE PHOSPHORYLASE
    Chains: A, B, C, D
    EC Number: 2.4.1.211
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LNPA
    Organism Scientific: BIFIDOBACTERIUM LONGUM
    Organism Taxid: 216816
    Strain: JCM1217
    Synonym: GALACTO-N-BIOSE/LACTO-N-BIOSE I PHOSPHORYLASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 20)

Asymmetric Unit (4, 20)
No.NameCountTypeFull Name
1A2G4Ligand/IonN-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
2GOL9Ligand/IonGLYCEROL
3MG6Ligand/IonMAGNESIUM ION
4NO31Ligand/IonNITRATE ION
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
1A2G2Ligand/IonN-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
2GOL5Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION
4NO31Ligand/IonNITRATE ION
Biological Unit 2 (2, 6)
No.NameCountTypeFull Name
1A2G2Ligand/IonN-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
2GOL4Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION
4NO3-1Ligand/IonNITRATE ION

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREVAL A:162 , TYR A:165 , PHE A:218 , TRP A:233 , PHE A:310 , LEU A:311 , GLY A:312 , ASP A:313 , HOH A:822 , HOH A:843 , HOH A:957 , HOH A:1657 , HOH A:1909 , HOH A:3110 , HOH B:1950BINDING SITE FOR RESIDUE A2G A4001
02AC2SOFTWARETRP A:447 , GLY A:448 , LYS A:449 , MET A:450 , ASP A:491 , NO3 A:4014BINDING SITE FOR RESIDUE GOL A4005
03AC3SOFTWAREARG A:118 , GLY A:121 , ARG A:257 , HOH A:1238BINDING SITE FOR RESIDUE GOL A4006
04AC4SOFTWAREPRO A:463 , ASN A:464 , HOH A:2383 , HOH A:2848BINDING SITE FOR RESIDUE GOL A4007
05AC5SOFTWARETYR A:321 , LYS A:322 , ASP A:323 , LYS A:449 , HOH A:1522 , HOH A:2506 , GOL A:4005BINDING SITE FOR RESIDUE NO3 A4014
06AC6SOFTWAREHOH A:2324 , HOH A:2572 , HOH A:2591 , HOH A:2597 , HOH A:2656BINDING SITE FOR RESIDUE MG A4016
07AC7SOFTWAREHOH A:2053 , VAL B:162 , TYR B:165 , PHE B:218 , TRP B:233 , PHE B:310 , LEU B:311 , GLY B:312 , ASP B:313 , HOH B:831 , HOH B:940 , HOH B:1015 , HOH B:1567 , HOH B:1944BINDING SITE FOR RESIDUE A2G B4002
08AC8SOFTWARETRP B:447 , GLY B:448 , LYS B:449 , MET B:450 , ASP B:491 , HOH B:2367BINDING SITE FOR RESIDUE GOL B4008
09AC9SOFTWAREGLY B:121 , ARG B:257 , GLU B:259BINDING SITE FOR RESIDUE GOL B4009
10BC1SOFTWAREHOH A:2391 , LYS B:229 , HOH B:1397 , HOH B:2133 , HOH B:2337BINDING SITE FOR RESIDUE MG B4015
11BC2SOFTWAREHOH B:1472 , HOH B:1599 , HOH B:1743 , HOH B:1798 , HOH B:2026 , HOH B:2225BINDING SITE FOR RESIDUE MG B4019
12BC3SOFTWAREVAL C:162 , TYR C:165 , PHE C:218 , TRP C:233 , PHE C:310 , LEU C:311 , GLY C:312 , ASP C:313 , HOH C:908 , HOH C:950 , HOH C:1043 , HOH C:1159 , HOH C:1776 , HOH C:1922 , HOH D:1987BINDING SITE FOR RESIDUE A2G C4003
13BC4SOFTWARETRP C:447 , GLY C:448 , LYS C:449 , MET C:450 , ASP C:491 , HOH C:2215 , HOH C:2376BINDING SITE FOR RESIDUE GOL C4010
14BC5SOFTWAREGLY C:121 , ARG C:257BINDING SITE FOR RESIDUE GOL C4011
15BC6SOFTWAREASP C:174 , HOH C:987 , HOH C:1425 , HOH C:1642 , HOH C:2307 , HOH C:2803BINDING SITE FOR RESIDUE MG C4018
16BC7SOFTWAREHOH C:2141 , VAL D:162 , TYR D:165 , PHE D:218 , TRP D:233 , LEU D:311 , GLY D:312 , ASP D:313 , HOH D:922 , HOH D:981 , HOH D:1993 , HOH D:2040 , HOH D:2946BINDING SITE FOR RESIDUE A2G D4004
17BC8SOFTWARETRP D:447 , GLY D:448 , LYS D:449 , MET D:450 , ASP D:491 , HOH D:2160BINDING SITE FOR RESIDUE GOL D4012
18BC9SOFTWAREHOH C:1478 , GLY D:121 , ARG D:257BINDING SITE FOR RESIDUE GOL D4013
19CC1SOFTWAREHOH D:806 , HOH D:914 , HOH D:994 , HOH D:1162 , HOH D:1377 , HOH D:2264BINDING SITE FOR RESIDUE MG D4017
20CC2SOFTWAREHOH C:1571 , HOH D:1301 , HOH D:2113 , HOH D:2245 , HOH D:2329 , HOH D:3047BINDING SITE FOR RESIDUE MG D4020

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ZUT)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Thr A:212 -Thr A:213
2Leu A:360 -Pro A:361
3Thr B:212 -Thr B:213
4Leu B:360 -Pro B:361
5Thr C:212 -Thr C:213
6Leu C:360 -Pro C:361
7Thr D:212 -Thr D:213
8Leu D:360 -Pro D:361

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ZUT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2ZUT)

(-) Exons   (0, 0)

(no "Exon" information available for 2ZUT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:744
 aligned with LNPA_BIFL2 | E8MF13 from UniProtKB/Swiss-Prot  Length:751

    Alignment length:752
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      751   
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742        |-  
           LNPA_BIFL2     3 STGRFTLPSEENFAEKTKELAELWGADAIRNSDGTHLDEAVLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWREA---   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhh...eee..--------hhhhh.eeeeee.....hhhhhhhhhhhh.eeeee...ee....eeeee.........eee....hhhhhheeee.......hhh.eee.....eeeee......eeeeeeeeee..hhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhh.....eeee........eee.....eeee.........hhhhhhhhhhhhh....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.............hhhhhh..eeeee..hhhhhhhhhh.....eeeee..............hhhhhhhhhhhhhhhhhh......ee...hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.hhhhhh..............hhhhhhhhhhhhh...eeeeeehhhhhhhh......eeeeee.......hhhhhhhhhhhhhhhhhhhh..eeeeee...eeeeee..eee.hhhhhheee..................hhhhh....hhhhhhhhhhhh............................eee.....eeee.......eeeeee..eeeeee.....hhhhhhhhhhhhhhhh.hhhhhh..ee....eeeeeehhh.eeeeee.....eeeeee.....eeeeee....eeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zut A   3 STGRFTLPSEENFAEKTKELAELWGADAIRNS--------VLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWREALEH 754
                                    12        22        32 |       -|       52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752  
                                                          34       43                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:735
 aligned with LNPA_BIFL2 | E8MF13 from UniProtKB/Swiss-Prot  Length:751

    Alignment length:747
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       
           LNPA_BIFL2     3 STGRFTLPSEENFAEKTKELAELWGADAIRNSDGTHLDEAVLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWR 749
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhhh..eee..------------..eeeeee.....hhhhhhhhhhhh.eeeee...ee....eeeee.........eee....hhhhhheeee.......hhh.eee.....eeeee......eeeeeeeeee..hhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhh.....eeee.......eeee.....eeeee...hhhhhhhhhhhhhhhhhh....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.............hhhhhh..eeeee..hhhhhhhhhh.....eeeee...............hhhhhhhhhhhhhhhhhhh...eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeee.hhhhhh..............hhhhhhhhhhhhh...eeeeeehhhhhhhh......eeeeee.......hhhhhhhhhhhhhhhhhhhh..eeeeee...eeeeee..eee.hhhhhheee...........................hhhhhhhhhhhh............................eee.....eeee.......eeeeee..eeeeee.....hhhhhhhhhhhhhhhh.hhhhhh..ee....eeeeee....eeeeee.....eeeeee.....eeeeee....eeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zut B   3 STGRFTLPSEENFAEKTKELAELWGADAIRNS------------GKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWR 749
                                    12        22        32 |       -    |   52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       
                                                          34           47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:744
 aligned with LNPA_BIFL2 | E8MF13 from UniProtKB/Swiss-Prot  Length:751

    Alignment length:752
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      751   
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742        |-  
           LNPA_BIFL2     3 STGRFTLPSEENFAEKTKELAELWGADAIRNSDGTHLDEAVLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWREA---   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhhh..eee..--------hhhhh.eeeeee.....hhhhhhhhhhhh.eeeee...ee....eeeee.........eee....hhhhhheeee.......hhh.eee.....eeeee......eeeeeeeeee..hhhhhhhhhhh..............hhhhhhhhhhhhhhhhhh.....eeee.......eeee.....eeeee........hhhhhhhhhhhhh....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.............hhhhhh..eeeee..hhhhhhhhhh.....eeeee..............hhhhhhhhhhhhhhhhhh......ee...hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.hhhhhh..............hhhhhhhhhhhhh...eeeeeehhhhhhhh......eeeeee.......hhhhhhhhhhhhhhhhhhhh..eeeeee...eeeeee..eee.hhhhhheee...........................hhhhhhhhhhhh............................eee.....eeee.......eeeeee..eeeeee.....hhhhhhhhhhhhhhhh.hhhhh...ee....eeeeeehhh.eeeeee.....eeeeee.....eeeeee....eeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zut C   3 STGRFTLPSEENFAEKTKELAELWGADAIRNS--------VLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWREALEH 754
                                    12        22        32 |       -|       52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752  
                                                          34       43                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:739
 aligned with LNPA_BIFL2 | E8MF13 from UniProtKB/Swiss-Prot  Length:751

    Alignment length:748
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742        
           LNPA_BIFL2     3 STGRFTLPSEENFAEKTKELAELWGADAIRNSDGTHLDEAVLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWRE 750
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhhh..eee.---------hhhhh.eeeeee.....hhhhhhhhhhhh.eeeee...ee....eeeee.........eee....hhhhhheeee.......hhh.eee.....eeeee......eeeeeeeeee..hhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhh.....eeee.......eeee.....eeeee...hhhhhhhhhhhhhhhhhh....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.............hhhhhh..eeeee..hhhhhhhhhh.....eeeee..............hhhhhhhhhhhhhhhhhhhh....ee...hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.hhhhhh..............hhhhhhhhhhhhh...eeeeeehhhhhhhh......eeeeee.......hhhhhhhhhhhhhhhhhhhh..eeeeee...eeeeee..eee.hhhhhheee...........................hhhhhhhhhhhh............................eee.....eeee.......eeeeee..eeeeee.....hhhhhhhhhhhhhhhh.hhhhh...ee....eeeeeehhhheeeeee.....eeeeee.....eeeeee....eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zut D   3 STGRFTLPSEENFAEKTKELAELWGADAIRN---------VLALGKKIYNAYFPTRAHNEWITLHMDETPQVYLLTDRILAESDTVDIPLMESFFAEQLKPNRDADPHKYWEVVDRTTGEVVDSANWTLDADEDTVHVSGVAAWHEYTVSFLAYIIWDPVEMYNHLTNDWGDKEHEIPFDIYHPATRKFVFDTFEQWLKDSPQTDVVRFTTFFYQFTLLFDEKRREKVVDWFGCACTVSPRALDDFEAKYGYRLRPEDFVDGGAYNSAWRVPRKAQRDWIDFLSGFVRENVKQLADMSHAAGKEAMMFLGDQWIGTEPYKDGFDELGLDAVVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRSPISRMGYGGYLSLAAKFPKFVDTVTHIANEFRDIHDRTGGVAAEGELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQLADVIGVDEERYQTLSVDKYFPPVVPDHFITADVPVDPAAREAWEQAGYRIPLSGCGGGQSIKPLGGIDFGEPVLNTYPVNENVTLLRADGGQVQLATNDYGKGRGVYISGLPYSAANARLLERVLFYASHNEDKYAAWSSSNPECEVAHFPEQGLYCVINNTDQPQKTTVTLADGTTEDFDLPDSGIAWRE 750
                                    12        22        32|        -|       52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742        
                                                         33        43
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2ZUT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2ZUT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2ZUT)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (LNPA_BIFL2 | E8MF13)
molecular function
    GO:0050500    1,3-beta-galactosyl-N-acetylhexosamine phosphorylase activity    Catalysis of the reaction: phosphate + beta-D-galactopyranosyl-(1->3)-N-acetyl-D-glucosamine = N-acetyl-D-glucosamine + alpha-D-galactopyranose 1-phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016757    transferase activity, transferring glycosyl groups    Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
    GO:0016758    transferase activity, transferring hexosyl groups    Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

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  2zut
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  2.4.1.211
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LNPA_BIFL2 | E8MF13: 2zus 2zuu 2zuv 2zuw 3wfz

(-) Related Entries Specified in the PDB File

2zus 2zuu 2zuv 2zuw