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(-) Description

Title :  CRYSTAL STRUCTURE OF AUH WITHOUT RNA
 
Authors :  K. Kurimoto, K. Kuwasako, Y. Muto, O. Nureki, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  16 Aug 08  (Deposition) - 30 Jun 09  (Release) - 30 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Beta Spiral, Lyase, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Kurimoto, K. Kuwasako, A. M. Sandercock, S. Unzai, C. V. Robinson, Y. Muto, S. Yokoyama
Au-Rich Rna-Binding Induces Changes In The Quaternary Structure Of Auh
Proteins V. 75 360 2009
PubMed-ID: 18831052  |  Reference-DOI: 10.1002/PROT.22246
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - METHYLGLUTACONYL-COA HYDRATASE
    Chains: A, B, C, D, E, F
    EC Number: 4.2.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PGEX6P1
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: AUH
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: AUH, AU-SPECIFIC RNA-BINDING ENOYL-COA HYDRATASE, AU-BINDING PROTEIN/ENOYL-COA HYDRATASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2ZQR)

(-) Sites  (0, 0)

(no "Site" information available for 2ZQR)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ZQR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2ZQR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 6)

Asymmetric/Biological Unit (1, 6)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_016911A240VAUHM_HUMANDisease (MGA1)769894315A/B/C/D/E/FA240V
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 6)

Asymmetric/Biological Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ENOYL_COA_HYDRATASEPS00166 Enoyl-CoA hydratase/isomerase signature.AUHM_HUMAN176-196
 
 
 
 
 		  6A:176-196
B:176-196
C:176-196
D:176-196
E:176-196
F:176-196

(-) Exons   (10, 60)

Asymmetric/Biological Unit (10, 60)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000003757311bENSE00001826706chr9:94124195-94123910286AUHM_HUMAN1-88886A:74-88
B:75-88
C:74-88
D:75-88
E:74-88
F:75-88		15
14
15
14
15
14
1.3aENST000003757313aENSE00000983075chr9:94118437-9411837068AUHM_HUMAN88-110236A:88-110
B:88-110
C:88-110
D:88-110
E:88-110
F:88-110		23
23
23
23
23
23
1.4ENST000003757314ENSE00000983076chr9:94118252-9411816588AUHM_HUMAN111-140306A:111-140
B:111-140
C:111-140
D:111-140
E:111-140
F:111-140		30
30
30
30
30
30
1.6ENST000003757316ENSE00001089490chr9:94087686-9408760087AUHM_HUMAN140-169306A:140-169
B:140-169
C:140-169
D:140-169
E:140-169
F:140-169		30
30
30
30
30
30
1.7bENST000003757317bENSE00001031477chr9:94060358-9406026693AUHM_HUMAN169-200326A:169-200
B:169-200
C:169-200
D:169-200
E:169-200
F:169-200		32
32
32
32
32
32
1.8ENST000003757318ENSE00001031481chr9:94058359-9405830357AUHM_HUMAN200-219206A:200-219
B:200-219
C:200-219
D:200-219
E:200-219
F:200-219		20
20
20
20
20
20
1.10aENST0000037573110aENSE00001031485chr9:93983274-93983087188AUHM_HUMAN219-281636A:219-281
B:219-281
C:219-281
D:219-281
E:219-281
F:219-281		63
63
63
63
63
63
1.11ENST0000037573111ENSE00001031480chr9:93979609-9397955951AUHM_HUMAN282-298176A:282-298
B:282-298
C:282-298
D:282-298
E:282-298
F:282-298		17
17
17
17
17
17
1.12ENST0000037573112ENSE00001031476chr9:93978388-9397834148AUHM_HUMAN299-314166A:299-314
B:299-314
C:299-314
D:299-314
E:299-314
F:299-314		16
16
16
16
16
16
1.13bENST0000037573113bENSE00001151806chr9:93976707-93976097611AUHM_HUMAN315-339256A:315-339
B:315-339
C:315-339
D:315-339
E:315-339
F:315-339		25
25
25
25
25
25

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:266
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:266
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      
           AUHM_HUMAN    74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqra_ A: AUH protein                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2zqrA01 A:74-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                     2zqrA02 A:280-339                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.hhhhh.eeeeee.hhhhh.....hhhhhhhhhhhhhhhh....eeeeee....eee...hhhhhhh.hhhhhhhhhhhhhhhhhhhhh....eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.eeehhhhhhh....eee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b      ----------------------Exon 1.4  PDB: A:111-140      ----------------------------Exon 1.7b  PDB: A:169-200       ------------------Exon 1.10a  PDB: A:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: A:315-33 Transcript 1 (1)
           Transcript 1 (2) --------------Exon 1.3a  PDB: A:88-11-----------------------------Exon 1.6  PDB: A:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr A  74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      


Chain B from PDB  Type:PROTEIN  Length:265
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:265
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334     
           AUHM_HUMAN    75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqrb_ B: AUH protein                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2zqrB01 B:75-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                    2zqrB02 B:280-339                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.hhhhh.eeeeee.........hhhhhhhhhhhhhhhhhh....eeeeee...eeee...hhhhhh..hhhhhhhhhhhhhhhhhhhhh....eeeee.eeeehhhhhhhhhh.eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b     ----------------------Exon 1.4  PDB: B:111-140      ----------------------------Exon 1.7b  PDB: B:169-200       ------------------Exon 1.10a  PDB: B:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: B:315-33 Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.3a  PDB: B:88-11-----------------------------Exon 1.6  PDB: B:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr B  75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334     


Chain C from PDB  Type:PROTEIN  Length:266
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:266
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      
           AUHM_HUMAN    74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqrc_ C: AUH protein                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2zqrC01 C:74-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                     2zqrC02 C:280-339                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee...eeee...hhhhhhh.hhhhhhhhhhhhhhhhhhhhh....eeeee.eeeehhhhhhhhh..eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhh..eeehhhhhhh....eee......hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b      ----------------------Exon 1.4  PDB: C:111-140      ----------------------------Exon 1.7b  PDB: C:169-200       ------------------Exon 1.10a  PDB: C:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: C:315-33 Transcript 1 (1)
           Transcript 1 (2) --------------Exon 1.3a  PDB: C:88-11-----------------------------Exon 1.6  PDB: C:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr C  74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      


Chain D from PDB  Type:PROTEIN  Length:265
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:265
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334     
           AUHM_HUMAN    75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqrd_ D: AUH protein                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2zqrD01 D:75-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                    2zqrD02 D:280-339                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.......eeeeee.........hhhhhhhhhhhhhhhh......eeeeee...eeee...hhhhhh..hhhhhhhhhhhhhhhhhhhhh....eeeee.eeeehhhhhhhhh..eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.eeehhhhhhh....eee......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b     ----------------------Exon 1.4  PDB: D:111-140      ----------------------------Exon 1.7b  PDB: D:169-200       ------------------Exon 1.10a  PDB: D:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: D:315-33 Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.3a  PDB: D:88-11-----------------------------Exon 1.6  PDB: D:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr D  75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334     


Chain E from PDB  Type:PROTEIN  Length:266
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:266
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      
           AUHM_HUMAN    74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqre_ E: AUH protein                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2zqrE01 E:74-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                     2zqrE02 E:280-339                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee...eeee...hhhhhhh.hhhhhhhhhhhhhhhhhhhhh....eeeee.eeeehhhhhhhhhh.eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.eeehhhhhhh....eee......hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b      ----------------------Exon 1.4  PDB: E:111-140      ----------------------------Exon 1.7b  PDB: E:169-200       ------------------Exon 1.10a  PDB: E:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: E:315-33 Transcript 1 (1)
           Transcript 1 (2) --------------Exon 1.3a  PDB: E:88-11-----------------------------Exon 1.6  PDB: E:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr E  74 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333      


Chain F from PDB  Type:PROTEIN  Length:265
 aligned with AUHM_HUMAN | Q13825 from UniProtKB/Swiss-Prot  Length:339

    Alignment length:265
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334     
           AUHM_HUMAN    75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
               SCOP domains d2zqrf_ F: AUH protein                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2zqrF01 F:75-279 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                    2zqrF02 F:280-339                                            CATH domains
           Pfam domains (1) -------ECH-2zqrF01 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (1)
           Pfam domains (2) -------ECH-2zqrF02 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (2)
           Pfam domains (3) -------ECH-2zqrF03 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (3)
           Pfam domains (4) -------ECH-2zqrF04 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (4)
           Pfam domains (5) -------ECH-2zqrF05 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (5)
           Pfam domains (6) -------ECH-2zqrF06 F:82-331                                                                                                                                                                                                                                      -------- Pfam domains (6)
         Sec.struct. author ..eeeee.hhhhh.eeeeee.hhhhh.eehhhhhhhhhhhhhhhhh.....eeeeee...eeee.eehhhhhh..hhhhhhhhhhhhhhhhhhhhh....eeeee.eeeehhhhhhhhh..eeeee...eee.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee......hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b     ----------------------Exon 1.4  PDB: F:111-140      ----------------------------Exon 1.7b  PDB: F:169-200       ------------------Exon 1.10a  PDB: F:219-281 UniProt: 219-281                    Exon 1.11        Exon 1.12       Exon 1.13b  PDB: F:315-33 Transcript 1 (1)
           Transcript 1 (2) -------------Exon 1.3a  PDB: F:88-11-----------------------------Exon 1.6  PDB: F:140-169      ------------------------------Exon 1.8            ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 2zqr F  75 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Clan: ClpP_crotonase (88)
(-)
Family: ECH (52)
(-)
Homo sapiens (Human) (4)
1aECH-2zqrF01F:82-331
1bECH-2zqrF02F:82-331
1cECH-2zqrF03F:82-331
1dECH-2zqrF04F:82-331
1eECH-2zqrF05F:82-331
1fECH-2zqrF06F:82-331

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (AUHM_HUMAN | Q13825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0004300    enoyl-CoA hydratase activity    Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2-enoyl-CoA + H2O.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0003730    mRNA 3'-UTR binding    Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
    GO:0004490    methylglutaconyl-CoA hydratase activity    Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = trans-3-methylglutaconyl-CoA + H(2)O.
biological process
    GO:0009083    branched-chain amino acid catabolic process    The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
    GO:0006552    leucine catabolic process    The chemical reactions and pathways resulting in the breakdown of leucine, 2-amino-4-methylpentanoic acid.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005759    mitochondrial matrix    The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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  2zqr
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  AUHM_HUMAN | Q13825
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  4.2.1.18
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  250950
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  AUHM_HUMAN | Q13825
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AUHM_HUMAN | Q13825: 1hzd 2zqq

(-) Related Entries Specified in the PDB File

1hzd AUH STRUCTURE MIXED WITH AUUUAG RNA
1v4o THE AUTHORS WISH IT TO BE KNOWN THAT THE ENTRY IS A RE- SUBMISSION OF WITHDRAWN ENTRIES 1V4O, WHICH HAVE BEEN HELD ON PUBLICATION FOR ONE YEAR.
2e8l THE AUTHORS WISH IT TO BE KNOWN THAT THE ENTRY IS A RE- SUBMISSION OF WITHDRAWN ENTRIES 2E8L, WHICH HAVE BEEN HELD ON PUBLICATION FOR ONE YEAR. RELATED ID: TRT001000268.1 RELATED DB: TARGETDB