Chain A from PDB Type:PROTEIN Length:321
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:321
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPP 322
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh..eeeeeeehhhhhh......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeee.hhhhhhh..hhhhhhhhh...eeeeee.eeee.....................eeee.......hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds A 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPP 321
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Chain B from PDB Type:PROTEIN Length:322
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:322
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPPS 323
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh......eehhhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeeehhhhhhhhh.hhhhhhhhh...eeeeee.eeee.....................eeee.......hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds B 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPPS 322
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Chain C from PDB Type:PROTEIN Length:322
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:322
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPPS 323
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh.....eeeehhhhhhhhh...hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeee...hhhhhh.hhhhhhhhh...eeeeee.eeee.....................eeee.......hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds C 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPPS 322
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Chain D from PDB Type:PROTEIN Length:322
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:322
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPPS 323
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh......eeehhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeee.hhhhh....hhhhhhhhh...eeeeee..eee.....................eee........hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds D 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPPS 322
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Chain E from PDB Type:PROTEIN Length:321
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:321
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPP 322
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh..eeeeeehhhhhhhhhh...hhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeee.hhhhhhhh.hhhhhhhhh...eeeeee.eeee.....................eeee.......hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds E 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPP 321
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Chain F from PDB Type:PROTEIN Length:322
aligned with O69946_STRCO | O69946 from UniProtKB/TrEMBL Length:332
Alignment length:322
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
O69946_STRCO 2 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFDFEPPS 323
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -------------------AP_endonuc_2-2zdsF01 F:20-273 AP_endonuc_2_N-2zdsF07 F:274-322 Pfam domains (1)
Pfam domains (2) -------------------AP_endonuc_2-2zdsF02 F:20-273 AP_endonuc_2_N-2zdsF08 F:274-322 Pfam domains (2)
Pfam domains (3) -------------------AP_endonuc_2-2zdsF03 F:20-273 AP_endonuc_2_N-2zdsF09 F:274-322 Pfam domains (3)
Pfam domains (4) -------------------AP_endonuc_2-2zdsF04 F:20-273 AP_endonuc_2_N-2zdsF10 F:274-322 Pfam domains (4)
Pfam domains (5) -------------------AP_endonuc_2-2zdsF05 F:20-273 AP_endonuc_2_N-2zdsF11 F:274-322 Pfam domains (5)
Pfam domains (6) -------------------AP_endonuc_2-2zdsF06 F:20-273 AP_endonuc_2_N-2zdsF12 F:274-322 Pfam domains (6)
Sec.struct. author ...eeee.hhhh..hhhhhhhhhhhhh..eeeee......hhhhhhhh.hhhhhhhhhhhhh..eeeeeeehhhhhh......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeee.....hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhh.....eeeeehhhhhhhhh.hhhhhhhhh...eeeeee.eeee.....................eeee.......hhhhhhhhhhhh.....eee.......hhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zds F 1 PRNFTLFTGQWADLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAmFPPAPESmIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRmLRSIDYQGPVSVEWEDAGmDRLQGAPEALTRLKAFDFEPPS 322
10 20 30 40 50 60 70 80 90 100 110 120 130 140| 150 160 170 180 190 200 210 220 230 240 250 260 270 280| 290 300 310 320
141-MSE 149-MSE 281-MSE 300-MSE
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |