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(-) Description

Title :  SOLUTION STRUCTURE OF THE DNAJ DOMAIN FROM HUMAN WILLIAMS-BEUREN SYNDROME CHROMOSOME REGION 18 PROTEIN
 
Authors :  T. Tomizawa, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  06 Apr 07  (Deposition) - 09 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  J Domain, All Helix Protein, Chaperone, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Tomizawa, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Dnaj Domain From Human Williams-Beuren Syndrome Chromosome Region 18 Protein
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - WILLIAMS-BEUREN SYNDROME CHROMOSOME REGION 18 PROTEIN
    Chains: A
    Engineered: YES
    Expression System Plasmid: P050620-25
    Expression System Vector Type: PLASMID
    Fragment: DNAJ DOMAIN
    Gene: WBSCR18
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: CELL-FREE PROTEIN SYNTHESIS

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DNAJ_2PS50076 dnaJ domain profile.DJC30_HUMAN49-114  1A:18-83

(-) Exons   (1, 1)

NMR Structure (1, 1)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003951761ENSE00001520810chr7:73097783-730966011183DJC30_HUMAN1-2362361A:1-99 (gaps)111

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:99
 aligned with DJC30_HUMAN | Q96LL9 from UniProtKB/Swiss-Prot  Length:226

    Alignment length:111
                                    35        45        55        65        75        85        95       105       115       125       135 
          DJC30_HUMAN    26 NSAPSLGLGARTYSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRGPGVRPSRTPAPDPG 136
               SCOP domains d2yuaa_       A: automated matches                                                                              SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------DnaJ-2yuaA01 A:18-80                                           ------------------------- Pfam domains
         Sec.struct. author .......------.........hhhhhhhh.....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhh......------.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------DNAJ_2  PDB: A:18-83 UniProt: 49-114                              ---------------------- PROSITE
               Transcript 1 Exon 1.1  PDB: A:1-99 (gaps) UniProt: 1-236 [INCOMPLETE]                                                        Transcript 1
                 2yua A   1 GSSGSSG------SQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRGPGSGPS------SG  99
                                  |  -   |    14        24        34        44        54        64        74        84        94  |     98 
                                  7      8                                                                                       97     98
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2YUA)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Chaperone-J (14)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (DJC30_HUMAN | Q96LL9)
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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