2XSW - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF HUMAN INPP5E

Authors :   L. Tresaugues, P. Schutz, C. H. Arrowsmith, H. Berglund, C. Bountra, R. A. M. Edwards, S. Flodin, A. Flores, S. Graslund, M. Hammarstrom, I. Jo T. Karlberg, S. Kol, T. Kotenyova, E. Kouznetsova, M. Moche, T. Nyman, C. Persson, H. Schuler, P. Schutz, M. I. Siponen, A. G. Thorsell, S. Van Der Berg, E. Wahlberg, J. Weigelt, M. Welin, P. Nordlund

Date :   30 Sep 10 (Deposition) - 17 Nov 10 (Release) - 17 Nov 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.90

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Inositol Signalling, Sgc Stockholm, Structural Genomics Consortium, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. Tresaugues, P. Schutz, C. H. Arrowsmith, H. Berglund, C. Bountra, R. Collins, A. M. Edwards, S. Flodin, A. Flores, S. Graslund, M. Hammarstrom, I. Johansson, T. Karlberg, S. Kol, T. Kotenyova, E. Kouznetsova, M. Moche, T. Nyman, C. Persson, H. Schuler, M. I. Siponen, A. G. Thorsell, S. Van Der Berg, E. Wahlberg, J. Weigelt, M. Welin, P. Nordlund
Crystal Structure Of Human Inpp5E
To Be Published
PubMed: search

Molecule 1 - 72 KDA INOSITOL POLYPHOSPHATE 5-PHOSPHATASE
	Chains	:	A, B
	EC Number	:	3.1.3.36
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PNIC-CH2
	Expression System Strain	:	BL21(DE3)R3 PRARE
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	PHOSPHATASE DOMAIN, RESIDUES 275-623
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	MAMMALIAN GENE COLLECTION (MGC)
	Synonym	:	PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 5-PHOSPHATASE, PHOSPHATIDYLINOSITOL POLYPHOSPHATE 5-PHOSPHATASE TYPE IV

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 8)

No.	Name	Count	Type	Full Name
1	CL	5	Ligand/Ion	CHLORIDE ION
2	GOL	3	Ligand/Ion	GLYCEROL

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	2	Ligand/Ion	GLYCEROL

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	1	Ligand/Ion	GLYCEROL

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:404 , SER A:427	BINDING SITE FOR RESIDUE CL A1625
2	AC2	SOFTWARE	GLU A:340 , HIS A:424 , SER A:427 , ASP A:477 , ASN A:479 , TYR A:534 , THR A:555 , HIS A:584 , HOH A:2208 , HOH A:2209	BINDING SITE FOR RESIDUE GOL A1626
3	AC3	SOFTWARE	SER A:391 , HOH A:2061 , HOH A:2062 , ARG B:441	BINDING SITE FOR RESIDUE CL A1627
4	AC4	SOFTWARE	GLU A:340 , HIS A:424 , HOH A:2072 , HOH A:2087	BINDING SITE FOR RESIDUE CL A1628
5	AC5	SOFTWARE	ARG A:621	BINDING SITE FOR RESIDUE GOL A1629
6	AC6	SOFTWARE	VAL B:398 , LYS B:404 , SER B:427	BINDING SITE FOR RESIDUE CL B1624
7	AC7	SOFTWARE	GLU B:340 , HIS B:424	BINDING SITE FOR RESIDUE CL B1625
8	AC8	SOFTWARE	GLU B:340 , HIS B:424 , SER B:427 , ASP B:477 , ASN B:479 , TYR B:534 , HIS B:584	BINDING SITE FOR RESIDUE GOL B1626

(no "SS Bond" information available for 2XSW)

Asymmetric Unit

No.	Residues
1	Leu A:448	-	Pro A:449
2	Tyr A:534	-	Lys A:535
3	Leu B:448	-	Pro B:449
4	Tyr B:534	-	Lys B:535

Asymmetric Unit (14, 28)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_077247	G	286	R	INP5E_HUMAN	Disease (JBTS1)	757936530	A/B	G	286	R
02	UniProt	VAR_077248	V	303	M	INP5E_HUMAN	Disease (JBTS1)	746212325	A/B	V	303	M
03	UniProt	VAR_077249	R	345	S	INP5E_HUMAN	Disease (JBTS1)	---	A/B	R	345	S
04	UniProt	VAR_063012	R	378	C	INP5E_HUMAN	Disease (JBTS1)	121918130	A/B	R	378	C
05	UniProt	VAR_077250	T	426	N	INP5E_HUMAN	Disease (JBTS1)	---	A/B	T	426	N
06	UniProt	VAR_063013	R	435	Q	INP5E_HUMAN	Disease (JBTS1)	121918129	A/B	R	435	Q
07	UniProt	VAR_077251	W	474	R	INP5E_HUMAN	Unclassified (JBTS1)	---	A/B	W	474	R
08	UniProt	VAR_063014	R	512	W	INP5E_HUMAN	Disease (JBTS1)	374152018	A/B	R	512	W
09	UniProt	VAR_063015	R	515	W	INP5E_HUMAN	Disease (JBTS1)	13297509	A/B	R	515	W
10	UniProt	VAR_077252	Y	534	D	INP5E_HUMAN	Disease (JBTS1)	---	A/B	Y	534	D
11	UniProt	VAR_063016	R	563	H	INP5E_HUMAN	Disease (JBTS1)	121918128	A/B	R	563	H
12	UniProt	VAR_063017	K	580	E	INP5E_HUMAN	Disease (JBTS1)	---	A/B	K	580	E
13	UniProt	VAR_077253	R	585	C	INP5E_HUMAN	Disease (JBTS1)	763992407	A/B	R	585	C
14	UniProt	VAR_076892	R	621	Q	INP5E_HUMAN	Disease (JBTS1)	---	A/B	R	621	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (14, 14)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_077247	G	286	R	INP5E_HUMAN	Disease (JBTS1)	757936530	A	G	286	R
02	UniProt	VAR_077248	V	303	M	INP5E_HUMAN	Disease (JBTS1)	746212325	A	V	303	M
03	UniProt	VAR_077249	R	345	S	INP5E_HUMAN	Disease (JBTS1)	---	A	R	345	S
04	UniProt	VAR_063012	R	378	C	INP5E_HUMAN	Disease (JBTS1)	121918130	A	R	378	C
05	UniProt	VAR_077250	T	426	N	INP5E_HUMAN	Disease (JBTS1)	---	A	T	426	N
06	UniProt	VAR_063013	R	435	Q	INP5E_HUMAN	Disease (JBTS1)	121918129	A	R	435	Q
07	UniProt	VAR_077251	W	474	R	INP5E_HUMAN	Unclassified (JBTS1)	---	A	W	474	R
08	UniProt	VAR_063014	R	512	W	INP5E_HUMAN	Disease (JBTS1)	374152018	A	R	512	W
09	UniProt	VAR_063015	R	515	W	INP5E_HUMAN	Disease (JBTS1)	13297509	A	R	515	W
10	UniProt	VAR_077252	Y	534	D	INP5E_HUMAN	Disease (JBTS1)	---	A	Y	534	D
11	UniProt	VAR_063016	R	563	H	INP5E_HUMAN	Disease (JBTS1)	121918128	A	R	563	H
12	UniProt	VAR_063017	K	580	E	INP5E_HUMAN	Disease (JBTS1)	---	A	K	580	E
13	UniProt	VAR_077253	R	585	C	INP5E_HUMAN	Disease (JBTS1)	763992407	A	R	585	C
14	UniProt	VAR_076892	R	621	Q	INP5E_HUMAN	Disease (JBTS1)	---	A	R	621	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (14, 14)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_077247	G	286	R	INP5E_HUMAN	Disease (JBTS1)	757936530	B	G	286	R
02	UniProt	VAR_077248	V	303	M	INP5E_HUMAN	Disease (JBTS1)	746212325	B	V	303	M
03	UniProt	VAR_077249	R	345	S	INP5E_HUMAN	Disease (JBTS1)	---	B	R	345	S
04	UniProt	VAR_063012	R	378	C	INP5E_HUMAN	Disease (JBTS1)	121918130	B	R	378	C
05	UniProt	VAR_077250	T	426	N	INP5E_HUMAN	Disease (JBTS1)	---	B	T	426	N
06	UniProt	VAR_063013	R	435	Q	INP5E_HUMAN	Disease (JBTS1)	121918129	B	R	435	Q
07	UniProt	VAR_077251	W	474	R	INP5E_HUMAN	Unclassified (JBTS1)	---	B	W	474	R
08	UniProt	VAR_063014	R	512	W	INP5E_HUMAN	Disease (JBTS1)	374152018	B	R	512	W
09	UniProt	VAR_063015	R	515	W	INP5E_HUMAN	Disease (JBTS1)	13297509	B	R	515	W
10	UniProt	VAR_077252	Y	534	D	INP5E_HUMAN	Disease (JBTS1)	---	B	Y	534	D
11	UniProt	VAR_063016	R	563	H	INP5E_HUMAN	Disease (JBTS1)	121918128	B	R	563	H
12	UniProt	VAR_063017	K	580	E	INP5E_HUMAN	Disease (JBTS1)	---	B	K	580	E
13	UniProt	VAR_077253	R	585	C	INP5E_HUMAN	Disease (JBTS1)	763992407	B	R	585	C
14	UniProt	VAR_076892	R	621	Q	INP5E_HUMAN	Disease (JBTS1)	---	B	R	621	Q

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 2XSW)

(no "Exon" information available for 2XSW)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:340
 aligned with INP5E_HUMAN | Q9NRR6 from UniProtKB/Swiss-Prot  Length:644

    Alignment length:343
                                   291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621   
          INP5E_HUMAN   282 GALLGADELARYFPDRNVALFVATWNMQGQKELPPSLDEFLLPAEADYAQDLYVIGVQEGCSDRREWETRLQETLGPHYVLLSSAAHGVLYMSLFIRRDLIWFCSEVECSTVTTRIVSQIKTKGALGISFTFFGTSFLFITSHFTSGDGKVAERLLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSGGRTVVDALLCQGLVVDVPALLQHDQLIREMRKGSIFKGFQEPDIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYRSRHKGDICPVSYSSCPGIKTSDHRPVYGLFRVKVRPGRDNIPLAAGKFDRELYLLGIKRRISK 624
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhh...eeeeeeeeee..........hhhhhh.........eeeeeee....hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee.hhhhh....eeeeeeeeeee..eeeeeeeeeeee..eeeeeeeee......hhhhhhhhhhhhhhhh.........hhhhh....hhhh..eeeeeee.......hhhhhhhhhh---..hhhhhhh.hhhhhhhhh.......................................eeeeeee.....eeeeeeee...........eeeeeeee...............hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----R----------------M-----------------------------------------S--------------------------------C-----------------------------------------------N--------Q--------------------------------------R-------------------------------------W--W------------------D----------------------------H----------------E----C-----------------------------------Q--- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xsw A 282 GALLGADELARYFPDRNVALFVATWNMQGQKELPPSLDEFLLPAEADYAQDLYVIGVQEGCSDRREWETRLQETLGPHYVLLSSAAHGVLYMSLFIRRDLIWFCSEVECSTVTTRIVSQIKTKGALGISFTFFGTSFLFITSHFTSGDGKVAERLLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSGGRTVVDALLC---VVDVPALLQHDQLIREMRKGSIFKGFQEPDIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYRSRHKGDICPVSYSSCPGIKTSDHRPVYGLFRVKVRPGRDNIPLAAGKFDRELYLLGIKRRISA 624
                                   291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491  |   |501       511       521       531       541       551       561       571       581       591       601       611       621   
                                                                                                                                                                                                                                              494 498

Chain B from PDB  Type:PROTEIN  Length:326
 aligned with INP5E_HUMAN | Q9NRR6 from UniProtKB/Swiss-Prot  Length:644

    Alignment length:342
                                   291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621  
          INP5E_HUMAN   282 GALLGADELARYFPDRNVALFVATWNMQGQKELPPSLDEFLLPAEADYAQDLYVIGVQEGCSDRREWETRLQETLGPHYVLLSSAAHGVLYMSLFIRRDLIWFCSEVECSTVTTRIVSQIKTKGALGISFTFFGTSFLFITSHFTSGDGKVAERLLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSGGRTVVDALLCQGLVVDVPALLQHDQLIREMRKGSIFKGFQEPDIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYRSRHKGDICPVSYSSCPGIKTSDHRPVYGLFRVKVRPGRDNIPLAAGKFDRELYLLGIKRRIS 623
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------------------Exo_endo_phos-2xswB01 B:304-584                                                                                                                                                                                                                                                          --------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------Exo_endo_phos-2xswB02 B:304-584                                                                                                                                                                                                                                                          --------------------------------------- Pfam domains (2)
         Sec.struct. author ....hhhhhhhhh...eeeeeeeeee..........hhhhhh.........eeeeeee....hhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee.hhhhh....eeeeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhhhhhhhhhhhhh.................hhhhh..eeeeeee.......--....--------.hhhhhhh.hhhhhhhhhh................eee......ee------eee..eeeeeee.....eeeeeeee...........eeeeeeee...............hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----R----------------M-----------------------------------------S--------------------------------C-----------------------------------------------N--------Q--------------------------------------R-------------------------------------W--W------------------D----------------------------H----------------E----C-----------------------------------Q-- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2xsw B 282 GALLGADELARYFPDRNVALFVATWNMQGQKELPPSLDEFLLPAEADYAQDLYVIGVQEGCSDRREWETRLQETLGPHYVLLSSAAHGVLYMSLFIRRDLIWFCSEVECSTVTTRIVSQIKTKGALGISFTFFGTSFLFITSHFTSGDGKVAERLLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSG--TVVD--------VDVPALLQHDQLIREMRKGSIFKGFQEPDIHFLPSYKFDIGKDTYD------TPSYTDRVLYRSRHKGDICPVSYSSCPGIKTSDHRPVYGLFRVKVRPGRDNIPLAAGKFDRELYLLGIKRRIS 623
                                   291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481  |  |  |-       501       511       521       531       541  |    551       561       571       581       591       601       611       621  
                                                                                                                                                                                                                                    484  |  |      499                                          544    551                                                                        
                                                                                                                                                                                                                                       487  |                                                                                                                                     
                                                                                                                                                                                                                                          490

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2XSW)

(no "CATH Domain" information available for 2XSW)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Exo_endo_phos] (21)

Family: Exo_endo_phos (21)

Homo sapiens (Human) (9)

1a	Exo_endo_phos-2xswB01	B:304-584
1b	Exo_endo_phos-2xswB02	B:304-584

Asymmetric Unit(hide GO term definitions)

Chain A,B (INP5E_HUMAN | Q9NRR6)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0004445	inositol-polyphosphate 5-phosphatase activity	Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.
	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate.
biological process
	GO:0008150	biological_process	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
	GO:0046855	inositol phosphate dephosphorylation	The process of removing a phosphate group from any mono- or polyphosphorylated inositol.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0006661	phosphatidylinositol biosynthetic process	The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
	GO:0046856	phosphatidylinositol dephosphorylation	The process of removing one or more phosphate groups from a phosphatidylinositol.
	GO:0046488	phosphatidylinositol metabolic process	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
	GO:0010976	positive regulation of neuron projection development	Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0032580	Golgi cisterna membrane	The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.
	GO:0000139	Golgi membrane	The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
	GO:0005930	axoneme	The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
	GO:0042995	cell projection	A prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0005929	cilium	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0001726	ruffle	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.

Asymmetric Unit
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	Cis Peptide Bonds
		Leu A:448 - Pro A:449	[ RasMol ]
		Leu B:448 - Pro B:449	[ RasMol ]
		Tyr A:534 - Lys A:535	[ RasMol ]
		Tyr B:534 - Lys B:535	[ RasMol ]

Biological Units
	Complete Structure
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		Biological Unit 2	[ Jena3D ]

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	2xsw
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	INP5E_HUMAN \| Q9NRR6
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	3.1.3.36
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	213300
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(no "Entries Sharing at Least One Protein Chain" available for 2XSW)

(no "Related Entries Specified in the PDB File" available for 2XSW)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (14, 28)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (1, 2)

Gene Ontology (22, 22)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File