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(-) Description

Title :  CRYSTAL STRUCTURE OF PLANT CELL WALL INVERTASE IN COMPLEX WITH A SPECIFIC PROTEIN INHIBITOR
 
Authors :  M. Hothorn, W. Van Den Ende, W. Lammens, V. Rybin, K. Scheffzek
Date :  07 Sep 10  (Deposition) - 06 Oct 10  (Release) - 15 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.58
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Biol. Unit 6:  K,L  (1x)
Keywords :  Hydrolase-Inhibitor Complex, Apoplast, Cell Wall, Hydrolase, Protein Inhibitor, Sugar Metabolism, Glycosidase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hothorn, W. Van Den Ende, W. Lammens, V. Rybin, K. Scheffzek
Structural Insights Into The Ph-Controlled Targeting Of Plant Cell-Wall Invertase By A Specific Inhibitor Protein.
Proc. Natl. Acad. Sci. Usa V. 107 17427 2010
PubMed-ID: 20858733  |  Reference-DOI: 10.1073/PNAS.1004481107

(-) Compounds

Molecule 1 - BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1
    Chains: A, C, E, G, I, K
    EC Number: 3.2.1.26
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Plasmid: PPICZ
    Expression System Taxid: 4922
    Fragment: RESIDUES 48-584
    Organism Common: THALE CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: CELL WALL INVERTASE 1, SUCROSE HYDROLASE 1, CELL WALL BETA-FRUCTOSIDASE 1
 
Molecule 2 - INVERTASE INHIBITOR
    Chains: B, D, F, H, J, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETM20
    Expression System Strain: ORIGAMI (DE3)
    Expression System Taxid: 562
    Expression System Variant: (DE3)
    Fragment: RESIDUES 19-166
    Organism Common: COMMON TOBACCO
    Organism Scientific: NICOTIANA TABACUM
    Organism Taxid: 4097

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): AB          
Biological Unit 2 (1x):   CD        
Biological Unit 3 (1x):     EF      
Biological Unit 4 (1x):       GH    
Biological Unit 5 (1x):         IJ  
Biological Unit 6 (1x):           KL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 73)

Asymmetric Unit (6, 73)
No.NameCountTypeFull Name
1BMA12Ligand/IonBETA-D-MANNOSE
2EPE6Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU6Ligand/IonFRUCTOSE
4MAN12Ligand/IonALPHA-D-MANNOSE
5NAG30Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO47Ligand/IonSULFATE ION
Biological Unit 1 (6, 13)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO42Ligand/IonSULFATE ION
Biological Unit 2 (6, 12)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO41Ligand/IonSULFATE ION
Biological Unit 3 (6, 12)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO41Ligand/IonSULFATE ION
Biological Unit 4 (6, 12)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO41Ligand/IonSULFATE ION
Biological Unit 5 (6, 12)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO41Ligand/IonSULFATE ION
Biological Unit 6 (6, 12)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FRU1Ligand/IonFRUCTOSE
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
6SO41Ligand/IonSULFATE ION

(-) Sites  (37, 37)

Asymmetric Unit (37, 37)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:22 , ASP A:23 , GLN A:39 , TRP A:47 , TRP A:82 , SER A:83 , ARG A:148 , ASP A:149 , GLU A:203 , TYR A:279 , ASP B:96 , LYS B:98BINDING SITE FOR RESIDUE FRU A1000
02AC2SOFTWAREASN A:143 , ALA A:144 , SER A:145 , NAG A:2000BINDING SITE FOR RESIDUE SO4 A2002
03AC3SOFTWAREASN A:116 , SER A:118BINDING SITE FOR RESIDUE NAG A3000
04AC4SOFTWAREASN B:48 , ALA B:51 , VAL B:52 , ALA B:74 , LYS B:78 , LEU B:81 , VAL G:51BINDING SITE FOR RESIDUE EPE B1000
05AC5SOFTWAREASN B:2BINDING SITE FOR RESIDUE SO4 B1001
06AC6SOFTWAREASN C:22 , ASP C:23 , GLN C:39 , TRP C:47 , TRP C:82 , SER C:83 , ARG C:148 , ASP C:149 , GLU C:203 , TYR C:279 , TRP C:297 , ASP D:96 , LYS D:98BINDING SITE FOR RESIDUE FRU C1000
07AC7SOFTWAREASN C:143 , ALA C:144 , SER C:145 , NAG C:2000BINDING SITE FOR RESIDUE SO4 C2002
08AC8SOFTWAREASN C:116 , SER C:118 , ASP C:119BINDING SITE FOR RESIDUE NAG C3000
09AC9SOFTWAREASN D:48 , ALA D:51 , VAL D:52 , ALA D:74 , LYS D:78 , LEU D:81 , HOH D:4027 , VAL E:51BINDING SITE FOR RESIDUE EPE D1000
10BC1SOFTWAREASN E:22 , ASP E:23 , GLN E:39 , TRP E:47 , TRP E:82 , SER E:83 , ARG E:148 , ASP E:149 , GLU E:203 , TYR E:279 , TRP E:297 , ASP F:96 , LYS F:98BINDING SITE FOR RESIDUE FRU E1000
11BC2SOFTWAREASN E:143 , ALA E:144 , SER E:145 , NAG E:2000BINDING SITE FOR RESIDUE SO4 E2002
12BC3SOFTWAREASN E:116BINDING SITE FOR RESIDUE NAG E3000
13BC4SOFTWAREVAL C:51 , ASN F:48 , ALA F:51 , VAL F:52 , ALA F:74 , LYS F:78 , LEU F:81BINDING SITE FOR RESIDUE EPE F1000
14BC5SOFTWAREASN G:22 , ASP G:23 , GLN G:39 , TRP G:47 , TRP G:82 , SER G:83 , ARG G:148 , ASP G:149 , GLU G:203 , TYR G:279 , ASP H:96 , LYS H:98BINDING SITE FOR RESIDUE FRU G1000
15BC6SOFTWAREASN G:143 , ALA G:144 , SER G:145 , NAG G:2000 , HOH G:4100BINDING SITE FOR RESIDUE SO4 G2002
16BC7SOFTWAREASN G:116 , SER G:118BINDING SITE FOR RESIDUE NAG G3000
17BC8SOFTWAREASN H:48 , ALA H:51 , VAL H:52 , ALA H:74 , LYS H:78 , LEU H:81BINDING SITE FOR RESIDUE EPE H1000
18BC9SOFTWAREASN I:22 , ASP I:23 , GLN I:39 , TRP I:47 , TRP I:82 , SER I:83 , ARG I:148 , ASP I:149 , GLU I:203 , ASP J:96 , LYS J:98BINDING SITE FOR RESIDUE FRU I1000
19CC1SOFTWAREASN I:143 , ALA I:144 , SER I:145 , NAG I:2000BINDING SITE FOR RESIDUE SO4 I2002
20CC2SOFTWAREASN I:116 , SER I:118 , ASP I:119BINDING SITE FOR RESIDUE NAG I3000
21CC3SOFTWAREASN J:48 , ALA J:51 , VAL J:52 , ALA J:74 , LYS J:78 , LEU J:81 , HOH J:4030 , VAL K:51 , PHE K:71BINDING SITE FOR RESIDUE EPE J1000
22CC4SOFTWAREASN K:22 , ASP K:23 , GLN K:39 , TRP K:47 , TRP K:82 , SER K:83 , ARG K:148 , ASP K:149 , GLU K:203 , TYR K:279 , ASP L:96 , LYS L:98BINDING SITE FOR RESIDUE FRU K1000
23CC5SOFTWAREASN K:143 , ALA K:144 , SER K:145 , NAG K:2000 , HOH K:4097 , HOH K:4098BINDING SITE FOR RESIDUE SO4 K2002
24CC6SOFTWAREASN K:116 , SER K:118 , ASP K:119 , HOH K:4099BINDING SITE FOR RESIDUE NAG K3000
25CC7SOFTWAREVAL I:51 , ASN L:48 , ALA L:51 , VAL L:52 , ALA L:74 , LYS L:78 , LEU L:81BINDING SITE FOR RESIDUE EPE L1000
26CC8SOFTWAREGLY A:141 , ASN A:143 , LYS A:168 , HIS A:170 , SO4 A:2002BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 143 RESIDUES 2000 TO 2001
27CC9SOFTWARELYS A:242 , LYS A:277 , ASN A:299 , GLU A:300 , SER A:301 , SER A:400 , LYS A:401 , ASP A:461 , THR A:463 , HOH A:4104 , HOH A:4120 , HOH A:4121 , HOH A:4122 , VAL B:105 , HOH B:4023BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 299 RESIDUES 1001 TO 1006
28DC1SOFTWAREASN C:143 , LYS C:168 , ILE C:169 , HIS C:170 , SO4 C:2002 , HOH C:4040BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 143 RESIDUES 2000 TO 2001
29DC2SOFTWARELYS C:242 , LYS C:277 , TRP C:297 , ASN C:299 , GLU C:300 , SER C:301 , GLN C:396 , SER C:400 , LYS C:401 , ASP C:461 , THR C:463 , HOH C:4071 , HOH C:4073 , HOH C:4117 , HOH C:4118 , VAL D:105 , GLU I:187BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 299 RESIDUES 1001 TO 1006
30DC3SOFTWAREASN E:143 , LYS E:168 , ILE E:169 , HIS E:170 , SO4 E:2002BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 143 RESIDUES 2000 TO 2001
31DC4SOFTWARELYS E:242 , LYS E:277 , ASN E:299 , GLU E:300 , SER E:400 , LYS E:401 , ASP E:461 , THR E:463 , HOH E:4048 , HOH E:4106 , HOH E:4107 , HOH E:4109 , HOH E:4110 , VAL F:105 , HOH F:4015BINDING SITE FOR CHAIN E OF SUGAR BOUND TO ASN E 299 RESIDUES 1001 TO 1006
32DC5SOFTWAREASN G:143 , LYS G:168 , ILE G:169 , HIS G:170 , SO4 G:2002BINDING SITE FOR CHAIN G OF SUGAR BOUND TO ASN G 143 RESIDUES 2000 TO 2001
33DC6SOFTWARELYS G:242 , LYS G:277 , TRP G:297 , ASN G:299 , GLU G:300 , GLN G:396 , SER G:400 , LYS G:401 , ASP G:461 , THR G:463 , HOH G:4068 , HOH G:4083 , VAL H:105 , HOH H:4015BINDING SITE FOR CHAIN G OF SUGAR BOUND TO ASN G 299 RESIDUES 1001 TO 1006
34DC7SOFTWAREASN I:143 , LYS I:168 , ILE I:169 , HIS I:170 , SO4 I:2002BINDING SITE FOR CHAIN I OF SUGAR BOUND TO ASN I 143 RESIDUES 2000 TO 2001
35DC8SOFTWARELYS I:242 , LYS I:277 , TRP I:297 , ASN I:299 , GLU I:300 , SER I:301 , SER I:400 , LYS I:401 , ASP I:461 , THR I:463 , HOH I:4105 , HOH I:4106 , HOH I:4107 , VAL J:105BINDING SITE FOR CHAIN I OF SUGAR BOUND TO ASN I 299 RESIDUES 1001 TO 1006
36DC9SOFTWAREASN K:143 , LYS K:168 , HIS K:170 , SO4 K:2002BINDING SITE FOR CHAIN K OF SUGAR BOUND TO ASN K 143 RESIDUES 2000 TO 2001
37EC1SOFTWARELYS K:242 , LYS K:277 , TYR K:279 , TRP K:297 , ASN K:299 , GLU K:300 , LEU K:397 , SER K:400 , LYS K:401 , ASP K:461 , THR K:463 , HOH K:4095 , HOH K:4096 , VAL L:105BINDING SITE FOR CHAIN K OF SUGAR BOUND TO ASN K 299 RESIDUES 1001 TO 1006

(-) SS Bonds  (18, 18)

Asymmetric Unit
No.Residues
1A:399 -A:448
2B:8 -B:17
3B:73 -B:114
4C:399 -C:448
5D:8 -D:17
6D:73 -D:114
7E:399 -E:448
8F:8 -F:17
9F:73 -F:114
10G:399 -G:448
11H:8 -H:17
12H:73 -H:114
13I:399 -I:448
14J:8 -J:17
15J:73 -J:114
16K:399 -K:448
17L:8 -L:17
18L:73 -L:114

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Asn A:131 -Pro A:132
2Gly A:411 -Pro A:412
3Asn C:131 -Pro C:132
4Gly C:411 -Pro C:412
5Asn E:131 -Pro E:132
6Gly E:411 -Pro E:412
7Asn G:131 -Pro G:132
8Gly G:411 -Pro G:412
9Asn I:131 -Pro I:132
10Gly I:411 -Pro I:412
11Asn K:131 -Pro K:132
12Gly K:411 -Pro K:412

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2XQR)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  6A:13-26
C:13-26
E:13-26
G:13-26
I:13-26
K:13-26
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1A:13-26
-
-
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1-
C:13-26
-
-
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1-
-
E:13-26
-
-
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1-
-
-
G:13-26
-
-
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1-
-
-
-
I:13-26
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F32PS00609 Glycosyl hydrolases family 32 active site.INV1_ARATH56-69
 
 
 
 
 		  1-
-
-
-
-
K:13-26

(-) Exons   (0, 0)

(no "Exon" information available for 2XQR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................ee.....ee.....eeeeeeeee..eeeeeeeee.....eee.....eeee....eeeeeeeeee..................eeeeeeeee....eeeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee.hhhhhee......hhhhhhhhh.......eeeeeeeeee.......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhhhheeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr A   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain B from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrb_ B: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr B   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      


Chain C from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................ee.....ee.....eeeeeeeee..eeeeeeeee......ee.....eeee....eeeeeeeeee..................eeeeeeeee....eeeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee.hhhhhee......hhhhhhhhh.......eeeeeeeeee.......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhhhheeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr C   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain D from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrd_ D: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr D   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      


Chain E from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................ee.....ee.....eeeeeeeee..eeeeeeeee.....eee.....eeee....eeeeeeeeee..................eeeeeeeee....eeeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee......ee......hhhhhhhhh.......eeeeeeeeee.......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhhhheeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr E   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain F from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrf_ F: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr F   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      


Chain G from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................eeee...ee.....eeeeeeeee..eeeeeeeee......ee.....eeee....eeeeeeeeee..................eeeeeeeee....eeeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee.hhhhh........hhhhhhhhh.......eeeeeeeeeee......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhh.eeeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr G   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain H from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrh_ H: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr H   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      


Chain I from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................eeee...ee.....eeeeeeeee..eeeeeeeee.....eee.....eeee....eeeeeeeeee..................eeeeeeeee.....eeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee.hhhhhee......hhhhhhhhh.......eeeeeeeeee.......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhhhheeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr I   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain J from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrj_ J: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr J   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      


Chain K from PDB  Type:PROTEIN  Length:537
 aligned with INV1_ARATH | Q43866 from UniProtKB/Swiss-Prot  Length:584

    Alignment length:537
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       
           INV1_ARATH    48 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------Glyco_hydro_32N-2xqrK01 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK07 K:386-495                                                                             ---------------------------------------------- Pfam domains (1)
           Pfam domains (2) --------Glyco_hydro_32N-2xqrK02 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK08 K:386-495                                                                             ---------------------------------------------- Pfam domains (2)
           Pfam domains (3) --------Glyco_hydro_32N-2xqrK03 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK09 K:386-495                                                                             ---------------------------------------------- Pfam domains (3)
           Pfam domains (4) --------Glyco_hydro_32N-2xqrK04 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK10 K:386-495                                                                             ---------------------------------------------- Pfam domains (4)
           Pfam domains (5) --------Glyco_hydro_32N-2xqrK05 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK11 K:386-495                                                                             ---------------------------------------------- Pfam domains (5)
           Pfam domains (6) --------Glyco_hydro_32N-2xqrK06 K:13-335                                                                                                                                                                                                                                                                                                   --------------------------------------------------Glyco_hydro_32C-2xqrK12 K:386-495                                                                             ---------------------------------------------- Pfam domains (6)
         Sec.struct. author ..............eeeeeeeeeeee..eeeeeeee..........eeeeeee......eeeeeee...hhhhh..eeeeeeee.....eeeeeeee.....eeeeeeee..........eee...................ee.....ee.....eeeeeeeee..eeeeeeeee......ee.....eeee....eeeeeeeeee..................eeeeeeeee....eeeeeeeeee....eeee..................eeeeeeee....eeeeeeee....hhhhhhhhhee.ee...eeeee......eeeee.hhhhhh.....eeeeeeee...eeee.......eeeeeeeeee......ee......hhhhhhhhh.......eeeeeeeeeee......eeeeeeeee.......eeeeeeee..............eeeee.......eeeeeeee..eeeeee....eeeeee......hhh.eeeeeee.....eeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GLYCOSYL_HYDRO----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr K   5 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       


Chain L from PDB  Type:PROTEIN  Length:146
 aligned with O49908_TOBAC | O49908 from UniProtKB/TrEMBL  Length:166

    Alignment length:146
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160      
         O49908_TOBAC    21 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 166
               SCOP domains d2xqrl_ L: automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) PMEI-2xqrL01 L:2-142                                                                                                                         ----- Pfam domains (1)
           Pfam domains (2) PMEI-2xqrL02 L:2-142                                                                                                                         ----- Pfam domains (2)
           Pfam domains (3) PMEI-2xqrL03 L:2-142                                                                                                                         ----- Pfam domains (3)
           Pfam domains (4) PMEI-2xqrL04 L:2-142                                                                                                                         ----- Pfam domains (4)
           Pfam domains (5) PMEI-2xqrL05 L:2-142                                                                                                                         ----- Pfam domains (5)
           Pfam domains (6) PMEI-2xqrL06 L:2-142                                                                                                                         ----- Pfam domains (6)
         Sec.struct. author hhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xqr L   2 NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL 147
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2XQR)

(-) Pfam Domains  (3, 18)

Asymmetric Unit
(-)
Clan: B_Fructosidase (34)
(-)
Clan: no clan defined [family: Glyco_hydro_32C] (13)
(-)
Clan: no clan defined [family: PMEI] (6)

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I,K   (INV1_ARATH | Q43866)
molecular function
    GO:0004564    beta-fructofuranosidase activity    Catalysis of the reaction: a fructofuranosylated fructofuranosyl acceptor + H2O = a non fructofuranosylated fructofuranosyl acceptor + a beta-D-fructofuranoside.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0004575    sucrose alpha-glucosidase activity    Catalysis of the reaction: sucrose + H2O = alpha-D-glucose + beta-D-fructose.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0080167    response to karrikin    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants).
    GO:0009611    response to wounding    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
cellular component
    GO:0048046    apoplast    The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain B,D,F,H,J,L   (O49908_TOBAC | O49908)
molecular function
    GO:0004857    enzyme inhibitor activity    Binds to and stops, prevents or reduces the activity of an enzyme.
biological process
    GO:0043086    negative regulation of catalytic activity    Any process that stops or reduces the activity of an enzyme.

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  O49908_TOBAC | O49908
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        INV1_ARATH | Q43866: 2ac1 2oxb 2qqu 2qqv 2qqw
UniProtKB/TrEMBL
        O49908_TOBAC | O49908: 1rj1 1rj4 2cj4 2cj5 2cj6 2cj7 2cj8

(-) Related Entries Specified in the PDB File

1rj1 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROMTOBACCO
1rj4 STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCOIN COMPLEX WITH CD2+
2cj4 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO AT PH 4.6
2cj5 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO (PH 5.0)
2cj6 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO (PH 7.5)
2cj7 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO (PH 9.0)
2cj8 CRYSTAL STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO (PH 9.5)