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(-) Description

Title :  THE CRYSTAL STRUCTURE OF BILIRUBIN OXIDASE FROM MYROTHECIUM VERRUCARIA
 
Authors :  T. P. Mcnamara, E. D. Lowe, J. A. Cracknell, C. F. Blanford
Date :  21 Jul 10  (Deposition) - 20 Apr 11  (Release) - 29 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.31
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Oxidoreductase, Blue Multicopper Oxidase, Laccase, Ascomycete, Dioxygen Reduction, Heme Catabolism, Glycoprotein, Protein Film Voltammetry (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. A. Cracknell, T. P. Mcnamara, E. D. Lowe, C. F. Blanford
Bilirubin Oxidase From Myrothecium Verrucaria: X- Ray Determination Of The Complete Crystal Structure And A Rational Surface Modification For Enhanced Electrocatalytic O(2) Reduction.
Dalton Trans V. 40 6668 2011
PubMed-ID: 21544308  |  Reference-DOI: 10.1039/C0DT01403F

(-) Compounds

Molecule 1 - BILIRUBIN OXIDASE
    Chains: A, B, C, D
    EC Number: 1.3.3.5
    Organism Scientific: MYROTHECIUM VERRUCARIA
    Organism Taxid: 5532

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 32)

Asymmetric Unit (2, 32)
No.NameCountTypeFull Name
1CU16Ligand/IonCOPPER (II) ION
2NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 4 (1, 4)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:397 , HIS A:398 , CYS A:457 , HIS A:462 , MET A:467BINDING SITE FOR RESIDUE CU A 535
02AC2SOFTWAREHIS A:136 , HIS A:401 , HIS A:403 , HIS A:456BINDING SITE FOR RESIDUE CU A 536
03AC3SOFTWAREHIS A:96 , TRP A:132 , HIS A:134 , HIS A:458BINDING SITE FOR RESIDUE CU A 537
04AC4SOFTWAREHIS A:94 , HIS A:96 , HIS A:401 , HIS A:403BINDING SITE FOR RESIDUE CU A 538
05AC5SOFTWARETHR B:397 , HIS B:398 , CYS B:457 , HIS B:462 , MET B:467BINDING SITE FOR RESIDUE CU B 535
06AC6SOFTWAREHIS B:136 , HIS B:401 , HIS B:403 , HIS B:456BINDING SITE FOR RESIDUE CU B 536
07AC7SOFTWAREHIS B:96 , TRP B:132 , HIS B:134 , HIS B:458BINDING SITE FOR RESIDUE CU B 537
08AC8SOFTWAREHIS B:94 , HIS B:96 , HIS B:401 , HIS B:403 , HOH B:2066BINDING SITE FOR RESIDUE CU B 538
09AC9SOFTWARETHR C:397 , HIS C:398 , CYS C:457 , HIS C:462 , MET C:467BINDING SITE FOR RESIDUE CU C 535
10BC1SOFTWAREHIS C:136 , HIS C:401 , HIS C:403 , HIS C:456BINDING SITE FOR RESIDUE CU C 536
11BC2SOFTWAREHIS C:96 , TRP C:132 , HIS C:134 , HIS C:458BINDING SITE FOR RESIDUE CU C 537
12BC3SOFTWAREHIS C:94 , HIS C:96 , HIS C:401 , HIS C:403BINDING SITE FOR RESIDUE CU C 538
13BC4SOFTWARETHR D:397 , HIS D:398 , CYS D:457 , HIS D:462 , MET D:467BINDING SITE FOR RESIDUE CU D 535
14BC5SOFTWAREHIS D:136 , HIS D:401 , HIS D:403 , HIS D:456BINDING SITE FOR RESIDUE CU D 536
15BC6SOFTWAREHIS D:96 , TRP D:132 , HIS D:134 , HIS D:458BINDING SITE FOR RESIDUE CU D 537
16BC7SOFTWAREHIS D:94 , HIS D:96 , HIS D:401 , HIS D:403BINDING SITE FOR RESIDUE CU D 538
17BC8SOFTWARELEU A:375 , ASN A:472 , THR A:474 , VAL A:475 , THR A:484 , HOH A:2265 , HOH A:2266 , HOH A:2269 , HOH A:2315 , HOH A:2318BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 472 RESIDUES 600 TO 601
18BC9SOFTWAREASN A:482 , GLU A:525 , TYR A:526 , ARG A:527 , HOH A:2319 , HOH A:2320 , HOH A:2322 , HOH A:2323 , HOH A:2324 , HOH A:2325BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 482 RESIDUES 602 TO 603
19CC1SOFTWARELEU B:375 , VAL B:452 , ASN B:472 , THR B:474 , VAL B:475 , THR B:484 , HOH B:2270 , HOH B:2315 , HOH B:2316 , HOH B:2317 , HOH B:2318 , HOH B:2319BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 472 RESIDUES 600 TO 601
20CC2SOFTWAREASN B:482 , GLU B:525 , TYR B:526 , ARG B:527 , HOH B:2320 , HOH B:2321 , HOH B:2323 , HOH B:2324 , HOH B:2325 , HOH B:2326BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 482 RESIDUES 602 TO 603
21CC3SOFTWAREASN C:472 , THR C:474 , VAL C:475 , THR C:484 , HOH C:2223 , HOH C:2270 , HOH C:2272 , HOH C:2312 , HOH C:2315 , HOH C:2316BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 472 RESIDUES 600 TO 601
22CC4SOFTWAREASN C:482 , GLU C:525 , TYR C:526 , ARG C:527 , HOH C:2317 , HOH C:2318 , HOH C:2319 , HOH C:2320 , HOH C:2321 , HOH C:2322 , HOH C:2323BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 482 RESIDUES 602 TO 603
23CC5SOFTWARELEU D:375 , ASN D:472 , THR D:474 , VAL D:475 , THR D:484 , HOH D:2233 , HOH D:2280 , HOH D:2284BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 472 RESIDUES 600 TO 601
24CC6SOFTWAREASN D:482 , GLU D:525 , TYR D:526 , ARG D:527 , HOH D:2335 , HOH D:2336 , HOH D:2337 , HOH D:2338 , HOH D:2339 , HOH D:2340BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 482 RESIDUES 602 TO 603

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2XLL)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Ser A:66 -Pro A:67
2Ala A:447 -Pro A:448
3His A:465 -Asp A:466
4Ser B:66 -Pro B:67
5Ala B:447 -Pro B:448
6His B:465 -Asp B:466
7Ser C:66 -Pro C:67
8Ala C:447 -Pro C:448
9His C:465 -Asp C:466
10Ser D:66 -Pro D:67
11Ala D:447 -Pro D:448
12His D:465 -Asp D:466

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2XLL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2XLL)

(-) Exons   (0, 0)

(no "Exon" information available for 2XLL)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:533
 aligned with BLRO_MYRVE | Q12737 from UniProtKB/Swiss-Prot  Length:572

    Alignment length:533
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568   
           BLRO_MYRVE    39 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 571
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................eeee......eeeeeeeeeeeeee........eeeeee.....eeeeeee....eeeeeee.......eeee....hhhhh..........eeeeeee......eeeeeee....hhhhhhhh..eeeeeeehhhhhh..........eeeeeeeee.....................eeee..ee..eeee...eeeeeeee......eeeeeee.........eeeeee..eeeeeeeee..eee....eeeeeee.hhhh..eeeeeehhhhhhh...........eeeeeee.............................eeeeeeee..eeee...........eeeeee..eeeeeeee.......eeeee....eeeeeeee.......hhhhh....eeee...eeeeeeeee....eeeeeee.hhhhhhh..eeeeeee.......hhhhhh...hhhhh.ee.hhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xll A   1 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 533
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   


Chain B from PDB  Type:PROTEIN  Length:533
 aligned with BLRO_MYRVE | Q12737 from UniProtKB/Swiss-Prot  Length:572

    Alignment length:533
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568   
           BLRO_MYRVE    39 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 571
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................eeee......eeeeeeeeeeeeee........eeeeee.....eeeeeee....eeeeeee.......eeee....hhhhh..........eeeeeee......eeeeeee....hhhhhhhh..eeeeeeehhhhhh..........eeeeeeeee.....................eeee..ee..eeee...eeeeeeee......eeeeeee.........eeeeee..eeeeeeeee..eee....eeeeeee.hhhh..eeeeeehhhhhhh...........eeeeeee.............................eeeeeeee..eeee...........eeeeee..eeeeeeee.......eeeee....eeeeeeee.......hhhhh....eeee...eeeeeeeee....eeeeeee.hhhhhhh..eeeeeee.......hhhhhh...hhhhh.ee.hhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xll B   1 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 533
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   


Chain C from PDB  Type:PROTEIN  Length:533
 aligned with BLRO_MYRVE | Q12737 from UniProtKB/Swiss-Prot  Length:572

    Alignment length:533
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568   
           BLRO_MYRVE    39 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 571
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................eeee......eeeeeeeeeeeeee........eeeeee.....eeeeeee....eeeeeee.......eeee....hhhhh..........eeeeeee......eeeeeee....hhhhhhhh..eeeeeeehhhhhh..........eeeeeeeee.....................eeee..ee..eeee...eeeeeeee......eeeeeee.........eeeeee..eeeeeeeee..eee....eeeeeee.hhhh..eeeeeehhhhhhh...........eeeeeee.............................eeeeeeee..eeee...........eeeeee..eeeeeeee.......eeeee....eeeeeeee.......hhhhh....eeee...eeeeeeeee....eeeeeee.hhhhhhh..eeeeeee.......hhhhhh...hhhhh.ee.hhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xll C   1 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 533
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   


Chain D from PDB  Type:PROTEIN  Length:533
 aligned with BLRO_MYRVE | Q12737 from UniProtKB/Swiss-Prot  Length:572

    Alignment length:533
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568   
           BLRO_MYRVE    39 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 571
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------------------------Cu-oxidase_3-2xllD05 D:44-160                                                                                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cu-oxidase_2-2xllD01 D:338-475                                                                                                            ---------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------Cu-oxidase_3-2xllD06 D:44-160                                                                                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cu-oxidase_2-2xllD02 D:338-475                                                                                                            ---------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------Cu-oxidase_3-2xllD07 D:44-160                                                                                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cu-oxidase_2-2xllD03 D:338-475                                                                                                            ---------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------Cu-oxidase_3-2xllD08 D:44-160                                                                                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cu-oxidase_2-2xllD04 D:338-475                                                                                                            ---------------------------------------------------------- Pfam domains (4)
         Sec.struct. author ........................eeee......eeeeeeeeeeeeee........eeeeee.....eeeeeee....eeeeeee.......eeee....hhhhh..........eeeeeee......eeeeeee....hhhhhhhh..eeeeeeehhhhhh..........eeeeeeeee.....................eeee..ee..eeee...eeeeeeee......eeeeeee.........eeeeee..eeeeeeeee..eee....eeeeeee.hhhh..eeeeeehhhhhhh...........eeeeeee.............................eeeeeeee..eeee...........eeeeee..eeeeeeee.......eeeee....eeeeeeee.......hhhhh....eeee...eeeeeeeee....eeeeeee.hhhhhhh..eeeeeee.......hhhhhh...hhhhh.ee.hhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2xll D   1 VAQISPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYELGEFQAQSGQFSVQAVTERIQTMAEYRPYAAAD 533
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2XLL)

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Asymmetric Unit
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Clan: CU_oxidase (192)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (BLRO_MYRVE | Q12737)
molecular function
    GO:0047705    bilirubin oxidase activity    Catalysis of the reaction: 2 bilirubin + O(2) = 2 biliverdin + 2 H(2)O.
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  BLRO_MYRVE | Q12737
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  BLRO_MYRVE | Q12737
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        BLRO_MYRVE | Q12737: 3abg

(-) Related Entries Specified in the PDB File

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