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(-) Description

Title :  CRYSTAL STRUCTURE OF MACROPHAGE MIGRATION INHIBITORY FACTOR HOMOLOGUE FROM PROCHLOROCOCCUS MARINUS
 
Authors :  A. A. Wasiel, H. J. Rozeboom, D. Hauke, B. J. Baas, E. Zandvoort, W. J. Qua A. M. W. H. Thunnissen, G. J. Poelarends
Date :  27 Apr 10  (Deposition) - 01 Sep 10  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.64
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Cytokine, Tautomerase, Immune System, Cyanobacterium (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Wasiel, H. J. Rozeboom, D. Hauke, B. J. Baas, E. Zandvoort, W. J. Quax, A. M. W. H. Thunnissen, G. J. Poelarends
Structural And Functional Characterization Of A Macrophage Migration Inhibitory Factor Homologue From The Marine Cyanobacterium Prochlorococcus Marinus.
Biochemistry V. 49 7572 2010
PubMed-ID: 20715791  |  Reference-DOI: 10.1021/BI1008276

(-) Compounds

Molecule 1 - POSSIBLE ATLS1-LIKE LIGHT-INDUCIBLE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET20B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: PROCHLOROCOCCUS MARINUS
    Organism Taxid: 74547
    Strain: MIT 9313
    Synonym: MACROPHAGE MIGRATION INHIBITORY FACTOR, MIF

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1PEG3Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:1 , LYS A:32 , ILE A:64 , TRP A:106BINDING SITE FOR RESIDUE PEG A 1115

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:114
 aligned with Q7V867_PROMM | Q7V867 from UniProtKB/TrEMBL  Length:115

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
         Q7V867_PROMM     2 PLINIQASVPAVADANSLLQELSSKLAELLGKPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDVPARLWGWNGSTFG 115
               SCOP domains d2xcza_ A: automated matches                                                                                       SCOP domains
               CATH domains 2xczA00 A:1-114 Macrophage Migration Inhibitory Factor                                                             CATH domains
               Pfam domains MIF-2xczA01 A:1-114                                                                                                Pfam domains
         Sec.struct. author .eeeeee......hhhhhhhhhhhhhhhhhh.hhhhheeeee..............eeeeeee......hhhhhhhhhhhhhhhhhhh.hhh.eeeeeee.hhhh.ee..ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 2xcz A   1 PLINIQASVPAVADANSLLQELSSKLAELLGKPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDVPARLWGWNGSTFG 114
                                    10        20        30        40        50        60        70        80        90       100       110
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: MIF (36)

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