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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  MODELLING OF THE COMPLEX BETWEEN SUBUNITS BCHI AND BCHD OF MAGNESIUM CHELATASE BASED ON SINGLE-PARTICLE CRYO-EM RECONSTRUCTION AT 7.5 ANG
 
Authors :  J. Lunqvist, H. Elmlund, R. Peterson Wulff, L. Berglund, D. Elmlund, C. Emanuelsson, H. Hebert, R. D. Willows, M. Hansson, M. Lindahl, S. Al Karadaghi
Date :  19 Jan 10  (Deposition) - 10 Nov 10  (Release) - 19 Apr 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  7.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Keywords :  Ligase, Bacteriochlorophyll Biosynthesis, Photosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Lundqvist, H. Elmlund, R. P. Wulff, L. Berglund, D. Elmlund, C. Emanuelsson, H. Hebert, R. D. Willows, M. Hansson, M. Lindahl, S. Al-Karadaghi
Atp-Induced Conformational Dynamics In The Aaa+ Motor Unit Of Magnesium Chelatase.
Structure V. 18 354 2010
PubMed-ID: 20223218  |  Reference-DOI: 10.1016/J.STR.2010.01.001

(-) Compounds

Molecule 1 - MAGNESIUM-CHELATASE 60 KDA SUBUNIT
    Chains: A, B, C, D, E, F
    EC Number: 6.6.1.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 373-561
    Organism Scientific: RHODOBACTER CAPSULATUS
    Organism Taxid: 1061
    Synonym: MG-PROTOPORPHYRIN IX CHELATASE, MG-CHELATASE SUBUNIT D
 
Molecule 2 - MAGNESIUM-CHELATASE 38 KDA SUBUNIT
    Chains: G, H, I, J, K, L
    EC Number: 6.6.1.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: RHODOBACTER CAPSULATUS
    Organism Taxid: 1061
    Synonym: MG-PROTOPORPHYRIN IX CHELATASE

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric/Biological Unit : ABCDEFGHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2X31)

(-) Sites  (0, 0)

(no "Site" information available for 2X31)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X31)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2X31)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X31)

(-) PROSITE Motifs  (1, 6)

Asymmetric/Biological Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1VWFAPS50234 VWFA domain profile.BCHD_RHOCB379-559
 
 
 
 
 		  6A:10-190
B:10-190
C:10-190
D:10-190
E:10-190
F:10-190

(-) Exons   (0, 0)

(no "Exon" information available for 2X31)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee......hh-hhhhhhhhhhhhhhh........eeee.............hhhhhhhhhhhh.......hhhhhhhhhhhhhh.......eeeee..........hhhhhhhhhh...eeeee.hhhhhh..hhhhhhhh..........eeee....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: A:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 A   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee........hh-hhhhhhhhhhhhh......eeeee................hhhhhhhhhhhh.......hhhhhhhhhhh..........eeeee..........hhhhhhhhhh...eeeee.........hhhhhhhh..........eeee....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: B:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 B   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee..........-hhhhhhhhhhhhhhh.......ee................hhhhhhhhhhhh.......hhhhhhhhhhhhhh........eeee..........hhhhhhhh.....eeeee.hhhhhh..hhhhhhhh..........eeee....hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: C:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 C   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee..........-hhhhhhhhhhhhh.........ee................hhhhhhhhhhhh.......hhhhhhhhhhh..........eeeee..........hhhhhhhhhh...eeeee.hhhh....hhhhhhhh..........eeee....hhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: D:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 D   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain E from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee........-hhhhhhhhhhhhhhh........eeee.............hhhhhhhhhhhh.......hhhhhhhhhh...........eeeee..........hhhhhhhhhhh.eeeeee.hhhhhh..hhhhhhhh..........eeee....hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: E:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 E   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain F from PDB  Type:PROTEIN  Length:188
 aligned with BCHD_RHOCB | P26175 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:189
                                   382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552         
           BCHD_RHOCB   373 KEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 561
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------VWA-2x31F01 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------VWA-2x31F02 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------VWA-2x31F03 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------VWA-2x31F04 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) -------VWA-2x31F05 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -------VWA-2x31F06 F: 11-135                                                                                                        --------------------------------------------------------- Pfam domains (6)
         Sec.struct. author ......eeeeeee........-hhhhhhhhhhhhh.......eeeeeee.............hhhhhhhhhhhh.......hhhhhhhhhhh..........eeeee..........hhhhhhhhhh...eeeee.hhhhh...hhhhhhhh......hhh.eeee....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VWFA  PDB: F:10-190 UniProt: 379-559                                                                                                                                                 -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 F   4 KEMSDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA 192
                                    13        23| |     33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183         
                                               24 |                                                                                                                                                                      
                                                 26                                                                                                                                                                      


Chain G from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhh.eee..hhhhhhhhhhhhhhhhh...eee........hhhhh..........eee....eeee....hhhhhhh..hhhhhhhhhhhh....hhhhh...eeee......hhhhhhhhhhhhhhh...eee..eee......eeeee........hhhhhhhh...........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 G  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341         


Chain H from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh.eee......hhhhhhhhhhhhh..eeee........hhhhh..........eeee...eeee....hhhhhheeehhhhhhhhh...eee.hhhhhh..eeeeee....hhhhhhhhhhhhhhh...ee....ee......eeeee.........hhhhhhh.eee........hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 H  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341         


Chain I from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhh.eee..hhhhhhhhhhhhhhhhh...eee........hhhhh..........eee....eeee....hhhhhhh..hhhhhhhhhhhh....hhhhh...eeee......hhhhhhhhhhhhhhh...eee..eee......eeeee........hhhhhhhh...........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 I  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341         


Chain J from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh.eee......hhhhhhhhhhhhh..eeee........hhhhh..........eeee...eeee....hhhhhheeehhhhhhhhh...eee.hhhhhh..eeeeee....hhhhhhhhhhhhhhh...ee....ee......eeeee.........hhhhhhh.eee........hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 J  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341         


Chain K from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhh.eee..hhhhhhhhhhhhhhhhh...eee........hhhhh..........eee....eeee....hhhhhhh..hhhhhhhhhhhh....hhhhh...eeee......hhhhhhhhhhhhhhh...eee..eee......eeeee........hhhhhhhh...........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 K  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341         


Chain L from PDB  Type:PROTEIN  Length:322
 aligned with BCHI_RHOCB | P26239 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:333
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347   
           BCHI_RHOCB    18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDPLDEAGSTARVARTVEETLP 350
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----Mg_chelatase-2x31L01 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----Mg_chelatase-2x31L02 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----Mg_chelatase-2x31L03 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----Mg_chelatase-2x31L04 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----Mg_chelatase-2x31L05 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----Mg_chelatase-2x31L06 L:22-204                                                                                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
         Sec.struct. author .............hhhhhhhhhhhhhhhh.eee......hhhhhhhhhhhhh..eeee........hhhhh..........eeee...eeee....hhhhhheeehhhhhhhhh...eee.hhhhhh..eeeeee....hhhhhhhhhhhhhhh...ee....ee......eeeee.........hhhhhhh.eee........hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..-----------...hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x31 L  18 RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRR-----------VARTVEETLP 350
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327 |       -   |   347   
                                                                                                                                                                                                                                                                                                                                                 329         341
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2X31)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2X31)

(-) Pfam Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Clan: P-loop_NTPase (1112)
(-)
Clan: vWA-like (60)

(-) Gene Ontology  (7, 14)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (BCHD_RHOCB | P26175)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0016851    magnesium chelatase activity    Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0030494    bacteriochlorophyll biosynthetic process    The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.
    GO:0015995    chlorophyll biosynthetic process    The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

Chain G,H,I,J,K,L   (BCHI_RHOCB | P26239)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0016851    magnesium chelatase activity    Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0030494    bacteriochlorophyll biosynthetic process    The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.
    GO:0015995    chlorophyll biosynthetic process    The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

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  2x31
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BCHI_RHOCB | P26239: 1g8p

(-) Related Entries Specified in the PDB File

1g8p CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE RELATED ID: EMD-1676 RELATED DB: EMDB CRYOEM 3D RECONSTRUCTION OF RHODOBACTER CAPSULATUS MG-CHELATASE BCHID COMPLEX IN THE PRESENCE OF ADP RELATED ID: EMD-1677 RELATED DB: EMDB CRYOEM 3D RECONSTRUCTION OF RHODOBACTER CAPSULATUS MG-CHELATASE BCHID COMPLEX IN THE PRESENCE OF ATP RELATED ID: EMD-1678 RELATED DB: EMDB CRYOEM 3D RECONSTRUCTION OF RHODOBACTER CAPSULATUS MG-CHELATASE BCHID COMPLEX IN THE PRESENCE OF AMPPNP