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(-) Description

Title :  STRUCTURAL BASIS OF A NOVEL PROTON-COORDINATION TYPE IN AN F1FO-ATP SYNTHASE ROTOR RING
 
Authors :  L. Preiss, O. Yildiz, D. B. Hicks, T. A. Krulwich, T. Meier
Date :  18 Jan 10  (Deposition) - 18 Aug 10  (Release) - 15 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M
Keywords :  Membrane Protein, Ion Transport, Atp Synthesis, Transmembrane, Cf(0), Membrane, Transport, C-Ring Rotor, Hydronium Ion, Ion Binding Pocket, Hydrogen Ion Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Preiss, O. Yildiz, D. B. Hicks, T. A. Krulwich, T. Meier
A New Type Of Proton Coordination In An F(1)F(O)- Atp Synthase Rotor Ring.
Plos Biol. V. 8 443 2010
PubMed-ID: 20689804  |  Reference-DOI: 10.1371/JOURNAL.PBIO.1000443

(-) Compounds

Molecule 1 - ATP SYNTHASE SUBUNIT C
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M
    Organism Scientific: BACILLUS PSEUDOFIRMUS OF4
    Organism Taxid: 398511
    Synonym: ATP SYNTHASE F(0) SECTOR SUBUNIT C, F-TYPE ATPASE SUBUNIT C, F-ATPASE SUBUNIT C, LIPID-BINDING PROTEIN, OF4 C RING

 Structural Features

(-) Chains, Units

  12345678910111213
Asymmetric/Biological Unit : ABCDEFGHIJKLM

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 36)

Asymmetric/Biological Unit (3, 36)
No.NameCountTypeFull Name
1DPV13Ligand/IonDODECYL 2-(TRIMETHYLAMMONIO)ETHYL PHOSPHATE
2FME13Mod. Amino AcidN-FORMYLMETHIONINE
3NA10Ligand/IonSODIUM ION

(-) Sites  (23, 23)

Asymmetric Unit (23, 23)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:26 , HOH A:2005 , LYS B:26 , DPV B:200 , DPV M:200BINDING SITE FOR RESIDUE DPV A 200
02AC2SOFTWAREALA B:27 , GLU B:30 , HOH B:2002 , HOH B:2006 , GLU C:30BINDING SITE FOR RESIDUE NA B 101
03AC3SOFTWAREDPV A:200 , ILE B:23 , LYS B:26 , GLU B:30 , HOH B:2001 , HOH B:2006 , LYS C:26 , GLU C:30 , DPV C:200BINDING SITE FOR RESIDUE DPV B 200
04AC4SOFTWAREALA C:27 , GLU C:30 , HOH C:2002 , GLU D:30BINDING SITE FOR RESIDUE NA C 101
05AC5SOFTWAREDPV B:200 , LYS C:26 , LYS D:26 , DPV D:200BINDING SITE FOR RESIDUE DPV C 200
06AC6SOFTWAREALA D:27 , GLU D:30 , HOH D:2001 , GLU E:30BINDING SITE FOR RESIDUE NA D 101
07AC7SOFTWAREDPV C:200 , LYS D:26 , GLU D:30 , HOH D:2004 , LYS E:26 , GLU E:30 , DPV E:200BINDING SITE FOR RESIDUE DPV D 200
08AC8SOFTWAREALA E:27 , GLU E:30 , GLU F:30BINDING SITE FOR RESIDUE NA E 101
09AC9SOFTWAREDPV D:200 , LYS E:26 , HOH E:2008 , LYS F:26 , DPV F:200BINDING SITE FOR RESIDUE DPV E 200
10BC1SOFTWAREALA F:27 , GLU F:30 , HOH F:2002 , GLU G:30BINDING SITE FOR RESIDUE NA F 101
11BC2SOFTWAREDPV E:200 , ILE F:23 , LYS F:26 , HOH F:2001 , LYS G:26 , DPV G:200BINDING SITE FOR RESIDUE DPV F 200
12BC3SOFTWAREVAL F:15 , DPV F:200 , ILE G:19 , LYS G:26 , GLU G:30 , LYS H:26 , GLU H:30 , DPV H:200BINDING SITE FOR RESIDUE DPV G 200
13BC4SOFTWAREALA H:27 , GLU H:30 , HOH H:2001 , GLU I:30BINDING SITE FOR RESIDUE NA H 101
14BC5SOFTWAREDPV G:200 , ILE H:23 , LYS H:26 , GLU H:30 , LYS I:26 , DPV I:200BINDING SITE FOR RESIDUE DPV H 200
15BC6SOFTWAREALA I:27 , GLU I:30 , HOH I:2001 , HOH I:2002 , GLU J:30BINDING SITE FOR RESIDUE NA I 101
16BC7SOFTWAREDPV H:200 , LYS I:26 , HOH I:2011 , LYS J:26 , DPV J:200BINDING SITE FOR RESIDUE DPV I 200
17BC8SOFTWAREALA J:27 , GLU J:30 , HOH J:2002 , GLU K:30BINDING SITE FOR RESIDUE NA J 101
18BC9SOFTWAREDPV I:200 , ILE J:23 , LYS J:26 , GLU J:30 , HOH J:2009 , LYS K:26 , GLU K:30 , DPV K:200BINDING SITE FOR RESIDUE DPV J 200
19CC1SOFTWAREGLU K:30 , HOH K:2003 , LYS L:26 , GLU L:30BINDING SITE FOR RESIDUE NA K 101
20CC2SOFTWAREDPV J:200 , LYS K:26 , GLU K:30 , HOH K:2002 , LYS L:26 , DPV L:200BINDING SITE FOR RESIDUE DPV K 200
21CC3SOFTWAREGLU L:30 , HOH L:2003 , LYS M:26 , GLU M:30BINDING SITE FOR RESIDUE NA L 101
22CC4SOFTWAREVAL K:15 , DPV K:200 , ILE L:23 , LYS L:26 , DPV M:200BINDING SITE FOR RESIDUE DPV L 200
23CC5SOFTWARELYS A:26 , GLU A:30 , DPV A:200 , DPV L:200 , ILE M:23 , LYS M:26 , GLU M:30 , HOH M:2005BINDING SITE FOR RESIDUE DPV M 200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X2V)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2X2V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X2V)

(-) PROSITE Motifs  (1, 13)

Asymmetric/Biological Unit (1, 13)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ATPASE_CPS00605 ATP synthase c subunit signature.ATPL_BACPE33-54
 
 
 
 
 
 
 
 
 
 
 
 		  13A:33-54
B:33-54
C:33-54
D:33-54
E:33-54
F:33-54
G:33-54
H:33-54
I:33-54
J:33-54
K:33-54
L:33-54
M:33-54

(-) Exons   (0, 0)

(no "Exon" information available for 2X2V)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vA00 A:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: A:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v A  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            |                                                                    
                            1-FME                                                                


Chain B from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vB00 B:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: B:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v B  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain C from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vC00 C:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: C:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v C  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain D from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vD00 D:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: D:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v D  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain E from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vE00 E:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: E:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v E  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain F from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vF00 F:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: F:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v F  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain G from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vG00 G:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: G:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v G  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain H from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vH00 H:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: H:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v H  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain I from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vI00 I:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: I:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v I  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain J from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vJ00 J:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: J:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v J  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain K from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vK00 K:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: K:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v K  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain L from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vL00 L:2-69 F1FO ATP Synthase                                     CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: L:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v L  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME                                                                


Chain M from PDB  Type:PROTEIN  Length:69
 aligned with ATPL_BACPE | P22483 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:69
                                    10        20        30        40        50        60         
            ATPL_BACPE    1 MAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains -2x2vM00 M:2-69 F1FO ATP Synthase                                     CATH domains
           Pfam domains (1) ATP-synt_C-2x2vM01 M:1-69                                             Pfam domains (1)
           Pfam domains (2) ATP-synt_C-2x2vM02 M:1-69                                             Pfam domains (2)
           Pfam domains (3) ATP-synt_C-2x2vM03 M:1-69                                             Pfam domains (3)
           Pfam domains (4) ATP-synt_C-2x2vM04 M:1-69                                             Pfam domains (4)
           Pfam domains (5) ATP-synt_C-2x2vM05 M:1-69                                             Pfam domains (5)
           Pfam domains (6) ATP-synt_C-2x2vM06 M:1-69                                             Pfam domains (6)
           Pfam domains (7) ATP-synt_C-2x2vM07 M:1-69                                             Pfam domains (7)
           Pfam domains (8) ATP-synt_C-2x2vM08 M:1-69                                             Pfam domains (8)
           Pfam domains (9) ATP-synt_C-2x2vM09 M:1-69                                             Pfam domains (9)
          Pfam domains (10) ATP-synt_C-2x2vM10 M:1-69                                             Pfam domains (10)
          Pfam domains (11) ATP-synt_C-2x2vM11 M:1-69                                             Pfam domains (11)
          Pfam domains (12) ATP-synt_C-2x2vM12 M:1-69                                             Pfam domains (12)
          Pfam domains (13) ATP-synt_C-2x2vM13 M:1-69                                             Pfam domains (13)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------ATPASE_C  PDB: M:33-54--------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  2x2v M  1 mAFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLILF 69
                            |       10        20        30        40        50        60         
                            1-FME
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2X2V)

(-) CATH Domains  (1, 13)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 13)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: ATP-synt_C] (9)

(-) Gene Ontology  (13, 13)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M   (ATPL_BACPE | P22483)
molecular function
    GO:0015078    hydrogen ion transmembrane transporter activity    Enables the transfer of hydrogen ions from one side of a membrane to the other.
    GO:0008289    lipid binding    Interacting selectively and non-covalently with a lipid.
biological process
    GO:0006754    ATP biosynthetic process    The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0015991    ATP hydrolysis coupled proton transport    The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
    GO:0015986    ATP synthesis coupled proton transport    The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0015992    proton transport    The directed movement of protons (hydrogen ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0045263    proton-transporting ATP synthase complex, coupling factor F(o)    All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.
    GO:0033177    proton-transporting two-sector ATPase complex, proton-transporting domain    A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.

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        ATPL_BACPE | P22483: 3zo6 4cbj 4cbk

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