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(-) Description

Title :  DIVIVA N-TERMINAL DOMAIN, F17A MUTANT
 
Authors :  M. A. Oliva, T. A. Leonard, J. Lowe
Date :  06 Oct 09  (Deposition) - 09 Jun 10  (Release) - 28 Jul 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Bacterial Cell Division, Septation, Cell Cycle, Sporulation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Oliva, S. Halbedel, S. M. Freund, P. Dutow, T. A. Leonard, D. B. Veprintsev, L. W. Hamoen, J. Lowe
Features Critical For Membrane Binding Revealed By Diviva Crystal Structure.
Embo J. V. 29 1988 2010
PubMed-ID: 20502438  |  Reference-DOI: 10.1038/EMBOJ.2010.99

(-) Compounds

Molecule 1 - SEPTUM SITE-DETERMINING PROTEIN DIVIVA
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: N-TERMINAL DOMAIN, RESIDUES 1-57
    Mutation: YES
    Organism Scientific: BACILLUS SUBTILIS
    Organism Taxid: 1423
    Strain: 168
    Synonym: CELL DIVISION INITIATION PROTEIN DIVIVA, MINICELL-ASSOCIATED PROTEIN DIVIVA

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2WUK)

(-) Sites  (0, 0)

(no "Site" information available for 2WUK)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2WUK)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2WUK)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2WUK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2WUK)

(-) Exons   (0, 0)

(no "Exon" information available for 2WUK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:55
 aligned with DIV4A_BACSU | P71021 from UniProtKB/Swiss-Prot  Length:164

    Alignment length:55
                                    11        21        31        41        51     
           DIV4A_BACSU    2 PLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56
               SCOP domains ------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------- Transcript
                  2wuk A  2 PLTPNDIHNKTFTKSARGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56
                                    11        21        31        41        51     


Chain B from PDB  Type:PROTEIN  Length:54
 aligned with DIV4A_BACSU | P71021 from UniProtKB/Swiss-Prot  Length:164

    Alignment length:54
                                    11        21        31        41        51    
           DIV4A_BACSU    2 PLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDE 55
               SCOP domains ------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------ Transcript
                  2wuk B  2 PLTPNDIHNKTFTKSARGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDE 55
                                    11        21        31        41        51    


Chain C from PDB  Type:PROTEIN  Length:56
 aligned with DIV4A_BACSU | P71021 from UniProtKB/Swiss-Prot  Length:164

    Alignment length:56
                                    11        21        31        41        51      
           DIV4A_BACSU    2 PLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57
               SCOP domains -------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                  2wuk C  2 PLTPNDIHNKTFTKSARGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57
                                    11        21        31        41        51      


Chain D from PDB  Type:PROTEIN  Length:55
 aligned with DIV4A_BACSU | P71021 from UniProtKB/Swiss-Prot  Length:164

    Alignment length:55
                                    11        21        31        41        51     
           DIV4A_BACSU    2 PLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56
               SCOP domains ------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------- CATH domains
           Pfam domains (1) -DivIVA-2wukD01 D:3-56                                  Pfam domains (1)
           Pfam domains (2) -DivIVA-2wukD02 D:3-56                                  Pfam domains (2)
           Pfam domains (3) -DivIVA-2wukD03 D:3-56                                  Pfam domains (3)
           Pfam domains (4) -DivIVA-2wukD04 D:3-56                                  Pfam domains (4)
         Sec.struct. author ..hhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------- Transcript
                  2wuk D  2 PLTPNDIHNKTFTKSARGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56
                                    11        21        31        41        51
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2WUK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2WUK)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: no clan defined [family: DivIVA] (2)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (DIV4A_BACSU | P71021)
molecular function
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0007049    cell cycle    The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
    GO:0051301    cell division    The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
    GO:0030435    sporulation resulting in formation of a cellular spore    The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  2wuk
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  DIV4A_BACSU | P71021
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DIV4A_BACSU | P71021: 2wuj

(-) Related Entries Specified in the PDB File

2wuj DIVIVA N-TERMINAL DOMAIN