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(-) Description

Title :  CRYSTAL STRUCTURE OF CTPR3Y3
 
Authors :  A. M. Krachler, A. Sharma, C. Kleanthous
Date :  21 Aug 09  (Deposition) - 07 Apr 10  (Release) - 19 May 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  De Novo Protein, Mutant, Tetratricopeptide, Tpr Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. Krachler, A. Sharma, C. Kleanthous
Self-Association Of Tpr Domains: Lessons Learned From A Designed, Consensus-Based Tpr Oligomer.
Proteins V. 78 2131 2010
PubMed-ID: 20455268  |  Reference-DOI: 10.1002/PROT.22726

(-) Compounds

Molecule 1 - CTPR3Y3
    Chains: A
    Organism Scientific: UNIDENTIFIED
    Organism Taxid: 32644
    Other Details: THE DE NOVO PROTEIN HAS THE FOLLOWING MUTATIONS D39Y, D73Y, D107Y
    Other Details - Source: DE NOVO SYNTHESIS

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric Unit (3, 4)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2MPD1Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
3MRD1Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
1EDO4Ligand/Ion1,2-ETHANEDIOL
2MPD2Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
3MRD2Ligand/Ion(4R)-2-METHYLPENTANE-2,4-DIOL

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:67 , LEU A:70 , GLU A:71BINDING SITE FOR RESIDUE MRD A1109
2AC2SOFTWAREGLN A:56 , GLY A:57BINDING SITE FOR RESIDUE MPD A1110
3AC3SOFTWARETYR A:20 , LYS A:55BINDING SITE FOR RESIDUE EDO A1111
4AC4SOFTWAREPRO A:40 , ASN A:41 , TRP A:46 , LYS A:68BINDING SITE FOR RESIDUE EDO A1112

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2WQH)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Pro A:5 -Gly A:6
2Tyr A:107 -Pro A:108

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:104
                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2wqhA00 A:5-108  [code=1.25.40.10, no name defined]                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhh.hhhhhh.hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 2wqh A   5 PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYP 108
                                    14        24        34        44        54        64        74        84        94       104
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2WQH)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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