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(-) Description

Title :  HOLOSTRUCTURE OF PYRUVATE DECARBOXYLASE FROM ACETOBACTER PASTEURIANUS
 
Authors :  D. Gocke, C. L. Berthold, G. Schneider, M. Pohl
Date :  14 Sep 07  (Deposition) - 08 Apr 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.75
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Thiamine Pyrophosphate, Pyruvate Decarboxylase, Lyase, Pyruvate, Flavoprotein, Thdp-Dependent Enzyme (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  

PubMed: search

(-) Compounds

Molecule 1 - PYRUVATE DECARBOXYLASE
    Atcc12874
    ChainsA, B, C, D, E, F, G, H
    EC Number4.1.1.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET22B
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Organism ScientificACETOBACTER PASTEURIANUS
    Organism Taxid438
    Other DetailsGERMAN COLLECTION OF MICROORGANISMS (DSM-NO 2347).

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)ABCD    
Biological Unit 2 (1x)    EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1MG8Ligand/IonMAGNESIUM ION
2TPP8Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2TPP4Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2TPP4Ligand/IonTHIAMINE DIPHOSPHATE

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:436 , ASN A:463 , GLY A:465 , TPP A:2000 , HOH A:2006BINDING SITE FOR RESIDUE MG A1000
02AC2SOFTWAREASP A:386 , GLY A:409 , HIS A:410 , ILE A:411 , GLY A:435 , ASP A:436 , GLY A:437 , SER A:438 , ASN A:463 , GLY A:465 , TYR A:466 , VAL A:467 , ILE A:468 , MG A:1000 , HOH A:2006 , ALA B:25 , GLY B:26 , GLU B:50 , VAL B:75BINDING SITE FOR RESIDUE TPP A2000
03AC3SOFTWAREASP B:436 , ASN B:463 , GLY B:465 , TPP B:2000 , HOH B:2005BINDING SITE FOR RESIDUE MG B1000
04AC4SOFTWAREALA A:25 , GLY A:26 , GLU A:50 , VAL A:75 , HIS A:114 , GLY B:385 , ASP B:386 , GLY B:409 , HIS B:410 , ILE B:411 , GLY B:435 , ASP B:436 , GLY B:437 , SER B:438 , ASN B:463 , GLY B:465 , TYR B:466 , VAL B:467 , ILE B:468 , MG B:1000 , HOH B:2005BINDING SITE FOR RESIDUE TPP B2000
05AC5SOFTWAREASP C:436 , ASN C:463 , GLY C:465 , TPP C:2000 , HOH C:2013BINDING SITE FOR RESIDUE MG C1000
06AC6SOFTWAREASP C:386 , GLY C:409 , HIS C:410 , ILE C:411 , GLY C:435 , ASP C:436 , GLY C:437 , SER C:438 , ASN C:463 , GLY C:465 , TYR C:466 , VAL C:467 , ILE C:468 , MG C:1000 , HOH C:2013 , HOH C:2014 , ALA D:25 , GLY D:26 , GLU D:50 , VAL D:75 , HIS D:114BINDING SITE FOR RESIDUE TPP C2000
07AC7SOFTWAREASP D:436 , ASN D:463 , GLY D:465 , TPP D:2000 , HOH D:2015BINDING SITE FOR RESIDUE MG D1000
08AC8SOFTWAREALA C:25 , GLY C:26 , GLU C:50 , VAL C:75 , HIS C:114 , GLY D:385 , ASP D:386 , GLY D:409 , HIS D:410 , ILE D:411 , GLY D:435 , ASP D:436 , GLY D:437 , SER D:438 , ASN D:463 , GLY D:465 , TYR D:466 , VAL D:467 , ILE D:468 , MG D:1000 , HOH D:2010 , HOH D:2015BINDING SITE FOR RESIDUE TPP D2000
09AC9SOFTWAREASP E:436 , ASN E:463 , GLY E:465 , TPP E:2000 , HOH E:2020BINDING SITE FOR RESIDUE MG E1000
10BC1SOFTWAREASP E:386 , GLY E:409 , HIS E:410 , ILE E:411 , GLY E:435 , ASP E:436 , GLY E:437 , SER E:438 , ASN E:463 , GLY E:465 , TYR E:466 , VAL E:467 , ILE E:468 , MG E:1000 , HOH E:2020 , ALA F:25 , GLY F:26 , GLU F:50 , VAL F:75 , HIS F:114BINDING SITE FOR RESIDUE TPP E2000
11BC2SOFTWAREASP F:436 , ASN F:463 , GLY F:465 , TPP F:2000 , HOH F:2007BINDING SITE FOR RESIDUE MG F1000
12BC3SOFTWAREALA E:25 , GLY E:26 , GLU E:50 , VAL E:75 , HIS E:114 , GLY F:385 , ASP F:386 , GLY F:409 , HIS F:410 , ILE F:411 , GLY F:435 , ASP F:436 , GLY F:437 , SER F:438 , ASN F:463 , GLY F:465 , TYR F:466 , VAL F:467 , ILE F:468 , MG F:1000 , HOH F:2007BINDING SITE FOR RESIDUE TPP F2000
13BC4SOFTWAREASP G:436 , ASN G:463 , GLY G:465 , TPP G:2000 , HOH G:2011BINDING SITE FOR RESIDUE MG G1000
14BC5SOFTWARETHR G:384 , GLY G:385 , ASP G:386 , GLY G:409 , HIS G:410 , ILE G:411 , GLY G:435 , ASP G:436 , GLY G:437 , SER G:438 , ASN G:463 , GLY G:465 , TYR G:466 , VAL G:467 , ILE G:468 , GLU G:469 , MG G:1000 , HOH G:2011 , ALA H:25 , GLY H:26 , GLU H:50 , VAL H:75 , HIS H:114BINDING SITE FOR RESIDUE TPP G2000
15BC6SOFTWAREASP H:436 , ASN H:463 , GLY H:465 , TPP H:2000 , HOH H:2013BINDING SITE FOR RESIDUE MG H1000
16BC7SOFTWAREALA G:25 , GLY G:26 , GLU G:50 , VAL G:75 , HIS G:114 , GLY H:385 , ASP H:386 , GLY H:409 , HIS H:410 , ILE H:411 , GLY H:435 , ASP H:436 , GLY H:437 , SER H:438 , ASN H:463 , GLY H:465 , TYR H:466 , VAL H:467 , ILE H:468 , MG H:1000 , HOH H:2013BINDING SITE FOR RESIDUE TPP H2000

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2VBI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2VBI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2VBI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2VBI)

(-) Exons   (0, 0)

(no "Exon" information available for 2VBI)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiA01 A:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiA02 A:188-348 TPP-binding domain                                                                                                                             ---2vbiA03 A:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi A   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain B from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiB01 B:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiB02 B:188-348 TPP-binding domain                                                                                                                             ---2vbiB03 B:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi B   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain C from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiC01 C:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiC02 C:188-348 TPP-binding domain                                                                                                                             ---2vbiC03 C:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi C   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain D from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiD01 D:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiD02 D:188-348 TPP-binding domain                                                                                                                             ---2vbiD03 D:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi D   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain E from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiE01 E:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiE02 E:188-348 TPP-binding domain                                                                                                                             ---2vbiE03 E:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeee.hhhh.........eeee.hhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi E   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain F from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiF01 F:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiF02 F:188-348 TPP-binding domain                                                                                                                             ---2vbiF03 F:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi F   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain G from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiG01 G:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiG02 G:188-348 TPP-binding domain                                                                                                                             ---2vbiG03 G:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi G   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

Chain H from PDB  Type:PROTEIN  Length:554
 aligned with Q8L388_ACEPA | Q8L388 from UniProtKB/TrEMBL  Length:557

    Alignment length:554
                                                                                                                                                                                                                                                                                                                                                                                                                                       398                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                     397 |                                                                                                                                                            
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391     | 400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550    
         Q8L388_ACEPA     2 TYTVGMYLAERLVQIGLKHHFAVGGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLKNRPAPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSGMPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLA-GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 554
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2vbiH01 H:2-186  [code=3.40.50.970, no name defined]                                                                                                                                     -2vbiH02 H:188-348 TPP-binding domain                                                                                                                             ---2vbiH03 H:352-540  [code=3.40.50.970, no name defined]                                                                                                                                       --------------- CATH domains
           Pfam domains (1) -TPP_enzyme_N-2vbiH17 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH01 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH09 H:378-529                                                                                                                          -------------------------- Pfam domains (1)
           Pfam domains (2) -TPP_enzyme_N-2vbiH18 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH02 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH10 H:378-529                                                                                                                          -------------------------- Pfam domains (2)
           Pfam domains (3) -TPP_enzyme_N-2vbiH19 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH03 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH11 H:378-529                                                                                                                          -------------------------- Pfam domains (3)
           Pfam domains (4) -TPP_enzyme_N-2vbiH20 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH04 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH12 H:378-529                                                                                                                          -------------------------- Pfam domains (4)
           Pfam domains (5) -TPP_enzyme_N-2vbiH21 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH05 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH13 H:378-529                                                                                                                          -------------------------- Pfam domains (5)
           Pfam domains (6) -TPP_enzyme_N-2vbiH22 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH06 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH14 H:378-529                                                                                                                          -------------------------- Pfam domains (6)
           Pfam domains (7) -TPP_enzyme_N-2vbiH23 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH07 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH15 H:378-529                                                                                                                          -------------------------- Pfam domains (7)
           Pfam domains (8) -TPP_enzyme_N-2vbiH24 H:3-179                                                                                                                                                     -------------------TPP_enzyme_M-2vbiH08 H:199-346                                                                                                                      -------------------------------TPP_enzyme_C-2vbiH16 H:378-529                                                                                                                          -------------------------- Pfam domains (8)
         Sec.struct. author ..hhhhhhhhhhhhhh..eeee.....hhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhh...eeeeeee.hhhhh...............hhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh..eeeeee.........ee............hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhh.eeeee.hhh.........eeeeehhhhh..hhhhhhhh..eeeee....................eeee...eeee..eeee..hhhhhhhhhhhhh...hhhhhh.................hhhhhhhhhhhhh...eeeee..hhhhhhhhh.......eee.........hhhhhhhhhhhh....eeeeeeehhhhhhhh.hhhhhhhh....eeeeee...hhhhhh...hhhhh.......hhhhhhhh.....eeeee.hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vbi H   2 TYTVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIASEPCVRPGPVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKGPNVILAEPDRVTVDGRAYDGFTLRAFLQALAEKAPARPASAQKSSVPTCSLTATSDEAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGPTLIECQIDRTDCTDMLVQWGRKVASTNARKT 555
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2VBI)

(-) CATH Domains  (2, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a2vbiA03A:352-540
1b2vbiB03B:352-540
1c2vbiC01C:2-186
1d2vbiD01D:2-186
1e2vbiE01E:2-186
1f2vbiF01F:2-186
1g2vbiG01G:2-186
1h2vbiH01H:2-186
1i2vbiC03C:352-540
1j2vbiD03D:352-540
1k2vbiE03E:352-540
1l2vbiF03F:352-540
1m2vbiG03G:352-540
1n2vbiH03H:352-540
1o2vbiA01A:2-186
1p2vbiB01B:2-186
2a2vbiA02A:188-348
2b2vbiB02B:188-348
2c2vbiC02C:188-348
2d2vbiD02D:188-348
2e2vbiE02E:188-348
2f2vbiF02F:188-348
2g2vbiG02G:188-348
2h2vbiH02H:188-348

(-) Pfam Domains  (3, 24)

Asymmetric Unit
(-)
Clan: FAD_DHS (82)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (Q8L388_ACEPA | Q8L388)
molecular function
    GO:0016831    carboxy-lyase activity    Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004737    pyruvate decarboxylase activity    Catalysis of the reaction: a 2-oxo acid = an aldehyde + CO2.
    GO:0030976    thiamine pyrophosphate binding    Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.

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