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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  MOLECULAR MODEL OF A TYPE III SECRETION SYSTEM NEEDLE
 
Authors :  J. E. Deane, P. Roversi, F. S. Cordes, S. Johnson, R. Kenjale, S. Daniell, F. Booy, W. L. Picking, W. D. Picking, A. J. Blocker, S. M. Lea
Date :  19 Jul 07  (Deposition) - 31 Jul 07  (Release) - 07 Aug 13  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  16.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,0,1
Keywords :  T3Ss, Virulence, Transport, Protein Transport, (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. E. Deane, P. Roversi, F. S. Cordes, S. Johnson, R. Kenjale, S. Daniell, F. Booy, W. D. Picking, W. L. Picking, A. J. Blocker, S. M. Lea
Molecular Model Of A Type Iii Secretion System Needle: Implications For Host-Cell Sensing.
Proc. Natl. Acad. Sci. Usa V. 103 12529 2006
PubMed-ID: 16888041  |  Reference-DOI: 10.1073/PNAS.0602689103
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MXIH
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, 1, 0
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET22B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Variant: DE3
    Organism Scientific: SHIGELLA FLEXNERI
    Organism Taxid: 623
    Other Details: RESIDUES 2-19 WERE MODELLED AS AN ALPHA HELIX. RESIDUES 20-80 COME FROM MOLECULE A OF PDB ENTRY 2CA5 RESIDUES 81-85 WERE MODELLED AS AN ALPHA HELIX.
    Strain: PWR100

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122232425262728
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRSTUVWXYZ01

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2V6L)

(-) Sites  (0, 0)

(no "Site" information available for 2V6L)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2V6L)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2V6L)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2V6L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2V6L)

(-) Exons   (0, 0)

(no "Exon" information available for 2V6L)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 0 from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l 0  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain 1 from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l 1  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain A from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l A  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain B from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l B  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain C from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l C  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain D from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l D  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain E from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l E  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain F from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l F  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain G from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l G  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain H from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l H  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain I from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l I  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain J from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l J  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain K from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l K  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain L from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l L  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain M from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l M  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain N from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l N  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain O from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l O  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain P from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l P  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain Q from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l Q  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain R from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l R  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain S from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l S  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain T from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l T  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain U from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l U  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain V from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l V  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain W from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l W  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain X from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l X  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain Y from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l Y  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81  


Chain Z from PDB  Type:PROTEIN  Length:82
 aligned with MXIH_SHIFL | P0A223 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:82
                                    11        21        31        41        51        61        71        81  
            MXIH_SHIFL    2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ---------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................................................................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------- Transcript
                  2v6l Z  2 SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    11        21        31        41        51        61        71        81
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2V6L)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2V6L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2V6L)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 0,1,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z   (MXIH_SHIFL | P0A223)
molecular function
    GO:0008565    protein transporter activity    Enables the directed movement of proteins into, out of or within a cell, or between cells.
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0015031    protein transport    The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.

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  2v6l
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  MXIH_SHIFL | P0A223
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MXIH_SHIFL | P0A223: 2ca5 3j0r

(-) Related Entries Specified in the PDB File

2ca5 MXIH NEEDLE PROTEIN OF SHIGELLA FLEXNERI (MONOMERIC FORM, RESIDUES 1-78) RELATED ID: EMD-1416 RELATED DB: EMDB HELICAL STRUCTURE OF THE NEEDLE OF THE TYPE III SECRETION SYSTEM OF SHIGELLA FLEXNERI